Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 RNU6-581P-201ENST00000516214 105 ntBASIC1.95□□□□□ -2.1
ECHDC3Q96DC8 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.95□□□□□ -2.1
ECHDC3Q96DC8 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.95□□□□□ -2.1
ECHDC3Q96DC8 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC1.95□□□□□ -2.1
ECHDC3Q96DC8 AL356432.3-201ENST00000568952 465 ntBASIC1.95□□□□□ -2.1
ECHDC3Q96DC8 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.95□□□□□ -2.1
ECHDC3Q96DC8 KC877982.1-201ENST00000602313 470 ntBASIC1.95□□□□□ -2.1
ECHDC3Q96DC8 AC068276.1-201ENST00000605793 379 ntBASIC1.95□□□□□ -2.1
ECHDC3Q96DC8 AC103710.2-201ENST00000609912 942 ntBASIC1.95□□□□□ -2.1
ECHDC3Q96DC8 AC090970.3-201ENST00000612566 866 ntBASIC1.95□□□□□ -2.1
ECHDC3Q96DC8 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.95□□□□□ -2.1
ECHDC3Q96DC8 AC138627.2-201ENST00000624202 601 ntBASIC1.95□□□□□ -2.1
ECHDC3Q96DC8 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.95□□□□□ -2.1
ECHDC3Q96DC8 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
ECHDC3Q96DC8 CENPCP1-201ENST00000533085 2578 ntBASIC1.94□□□□□ -2.1
ECHDC3Q96DC8 Y_RNA.46-201ENST00000362695 102 ntBASIC1.94□□□□□ -2.1
ECHDC3Q96DC8 RNU6-511P-201ENST00000363496 107 ntBASIC1.94□□□□□ -2.1
ECHDC3Q96DC8 Y_RNA.534-201ENST00000384599 112 ntBASIC1.94□□□□□ -2.1
ECHDC3Q96DC8 MIR518D-201ENST00000385014 87 ntBASIC1.94□□□□□ -2.1
ECHDC3Q96DC8 U8.13-201ENST00000390842 128 ntBASIC1.94□□□□□ -2.1
ECHDC3Q96DC8 AL354692.1-201ENST00000423044 315 ntBASIC1.94□□□□□ -2.1
ECHDC3Q96DC8 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.94□□□□□ -2.1
ECHDC3Q96DC8 SRIP2-201ENST00000428470 166 ntBASIC1.94□□□□□ -2.1
ECHDC3Q96DC8 AL592045.1-201ENST00000429867 352 ntBASIC1.94□□□□□ -2.1
ECHDC3Q96DC8 NEFMP1-201ENST00000443423 1006 ntBASIC1.94□□□□□ -2.1
ECHDC3Q96DC8 FABP5P13-201ENST00000452144 328 ntBASIC1.94□□□□□ -2.1
ECHDC3Q96DC8 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.94□□□□□ -2.1
ECHDC3Q96DC8 RNA5SP182-201ENST00000516064 82 ntBASIC1.94□□□□□ -2.1
ECHDC3Q96DC8 RNU6-1003P-201ENST00000517099 105 ntBASIC1.94□□□□□ -2.1
ECHDC3Q96DC8 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC1.94□□□□□ -2.1
ECHDC3Q96DC8 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.94□□□□□ -2.1
ECHDC3Q96DC8 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.94□□□□□ -2.1
ECHDC3Q96DC8 OR5AQ1P-201ENST00000527596 927 ntBASIC1.94□□□□□ -2.1
ECHDC3Q96DC8 AC012435.1-202ENST00000568772 240 ntBASIC1.94□□□□□ -2.1
ECHDC3Q96DC8 AL158827.2-201ENST00000602494 330 ntBASIC1.94□□□□□ -2.1
ECHDC3Q96DC8 SNRPGP19-201ENST00000603826 189 ntBASIC1.94□□□□□ -2.1
ECHDC3Q96DC8 AC112187.2-201ENST00000604345 283 ntBASIC1.94□□□□□ -2.1
ECHDC3Q96DC8 AC009974.1-201ENST00000608881 455 ntBASIC1.94□□□□□ -2.1
ECHDC3Q96DC8 AL391813.2-201ENST00000609113 322 ntBASIC1.94□□□□□ -2.1
ECHDC3Q96DC8 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.94□□□□□ -2.1
ECHDC3Q96DC8 AP001486.3-201ENST00000615334 372 ntBASIC1.94□□□□□ -2.1
ECHDC3Q96DC8 U4atac.1-201ENST00000618345 95 ntBASIC1.94□□□□□ -2.1
ECHDC3Q96DC8 AL162373.1-201ENST00000620433 407 ntBASIC1.94□□□□□ -2.1
ECHDC3Q96DC8 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
ECHDC3Q96DC8 AL691447.3-201ENST00000635020 330 ntBASIC1.94□□□□□ -2.1
ECHDC3Q96DC8 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.94□□□□□ -2.1
ECHDC3Q96DC8 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.93□□□□□ -2.1
ECHDC3Q96DC8 RNA5SP338-201ENST00000410495 85 ntBASIC1.93□□□□□ -2.1
ECHDC3Q96DC8 RPS12P24-201ENST00000412619 387 ntBASIC1.93□□□□□ -2.1
ECHDC3Q96DC8 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.93□□□□□ -2.1
ECHDC3Q96DC8 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.93□□□□□ -2.1
ECHDC3Q96DC8 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC1.93□□□□□ -2.1
ECHDC3Q96DC8 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.93□□□□□ -2.1
ECHDC3Q96DC8 AC092001.1-201ENST00000453012 261 ntBASIC1.93□□□□□ -2.1
ECHDC3Q96DC8 AC055731.1-201ENST00000474387 401 ntBASIC1.93□□□□□ -2.1
ECHDC3Q96DC8 AC119751.4-201ENST00000507498 357 ntBASIC1.93□□□□□ -2.1
ECHDC3Q96DC8 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.93□□□□□ -2.1
ECHDC3Q96DC8 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
ECHDC3Q96DC8 FAM92A1P1-201ENST00000528023 890 ntBASIC1.93□□□□□ -2.1
ECHDC3Q96DC8 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.93□□□□□ -2.1
ECHDC3Q96DC8 MTND4P33-201ENST00000556706 766 ntBASIC1.93□□□□□ -2.1
ECHDC3Q96DC8 AL049838.1-201ENST00000563647 981 ntBASIC1.93□□□□□ -2.1
ECHDC3Q96DC8 MTND1P8-201ENST00000571424 950 ntBASIC1.93□□□□□ -2.1
ECHDC3Q96DC8 MIR4287-201ENST00000579398 78 ntBASIC1.93□□□□□ -2.1
ECHDC3Q96DC8 MIR3146-201ENST00000580367 79 ntBASIC1.93□□□□□ -2.1
ECHDC3Q96DC8 MIR4448-201ENST00000584360 86 ntBASIC1.93□□□□□ -2.1
ECHDC3Q96DC8 AC008749.1-201ENST00000597650 306 ntBASIC1.93□□□□□ -2.1
ECHDC3Q96DC8 AC108747.1-201ENST00000609508 535 ntBASIC1.93□□□□□ -2.1
ECHDC3Q96DC8 AL365204.3-201ENST00000612448 685 ntBASIC1.93□□□□□ -2.1
ECHDC3Q96DC8 uc_338.12-201ENST00000616344 181 ntBASIC1.93□□□□□ -2.1
ECHDC3Q96DC8 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
ECHDC3Q96DC8 MTND4P1-201ENST00000457501 1466 ntBASIC1.93□□□□□ -2.1
ECHDC3Q96DC8 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.93□□□□□ -2.1
ECHDC3Q96DC8 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 RNA5SP138-201ENST00000365098 114 ntBASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 SMIM11P1-201ENST00000369586 178 ntBASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 MIR147B-201ENST00000390185 80 ntBASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 MIR676-201ENST00000390702 67 ntBASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 AC019129.1-201ENST00000403786 261 ntBASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 MIR1289-2-201ENST00000408360 111 ntBASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 RAC1P6-201ENST00000423911 575 ntBASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 AL591704.1-201ENST00000432574 275 ntBASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 RPL7P34-201ENST00000433316 712 ntBASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 PMCHL2-203ENST00000457791 237 ntBASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 AC117503.1-201ENST00000472241 394 ntBASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 RPL7P43-201ENST00000478876 753 ntBASIC1.92□□□□□ -2.1
ECHDC3Q96DC8 AC104685.1-201ENST00000502445 371 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms