Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 SRIP2-201ENST00000428470 166 ntBASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 AC005019.1-201ENST00000436455 431 ntBASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 CST9LP2-201ENST00000437612 320 ntBASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 PRPS1P1-201ENST00000445305 876 ntBASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 AL360271.2-201ENST00000447710 161 ntBASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 AP002884.2-201ENST00000471647 395 ntBASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 AC092185.1-201ENST00000491371 97 ntBASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 Y_RNA.654-201ENST00000497848 106 ntBASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 SNORA31.1-201ENST00000515993 133 ntBASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 RNU2-69P-201ENST00000516061 100 ntBASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 SNORA31.5-201ENST00000516190 133 ntBASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 SNORA64.4-201ENST00000516632 81 ntBASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 SNORA31.19-201ENST00000517079 126 ntBASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 MIR5195-201ENST00000583555 115 ntBASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 AC012119.1-201ENST00000603184 222 ntBASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 BNIP3P10-201ENST00000605360 577 ntBASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 AC006504.8-201ENST00000621046 635 ntBASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 AC022418.1-201ENST00000624118 445 ntBASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.92□□□□□ -1.78
CHMP4CQ96CF2 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.91□□□□□ -1.78
CHMP4CQ96CF2 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CHMP4CQ96CF2 MIR412-201ENST00000362142 91 ntBASIC3.91□□□□□ -1.78
CHMP4CQ96CF2 RNU6-82P-201ENST00000363970 107 ntBASIC3.91□□□□□ -1.78
CHMP4CQ96CF2 AL357075.1-201ENST00000404107 726 ntBASIC3.91□□□□□ -1.78
CHMP4CQ96CF2 RPL26P27-201ENST00000414397 437 ntBASIC3.91□□□□□ -1.78
CHMP4CQ96CF2 HSPE1P1-201ENST00000421494 318 ntBASIC3.91□□□□□ -1.78
CHMP4CQ96CF2 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.91□□□□□ -1.78
CHMP4CQ96CF2 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.91□□□□□ -1.78
CHMP4CQ96CF2 BRK1P2-201ENST00000442875 223 ntBASIC3.91□□□□□ -1.78
CHMP4CQ96CF2 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.91□□□□□ -1.78
CHMP4CQ96CF2 RPL26P9-201ENST00000457466 433 ntBASIC3.91□□□□□ -1.78
CHMP4CQ96CF2 RN7SL442P-201ENST00000473804 320 ntBASIC3.91□□□□□ -1.78
CHMP4CQ96CF2 AC022493.1-201ENST00000492984 337 ntBASIC3.91□□□□□ -1.78
CHMP4CQ96CF2 AC018710.1-201ENST00000506509 158 ntBASIC3.91□□□□□ -1.78
CHMP4CQ96CF2 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.91□□□□□ -1.78
CHMP4CQ96CF2 SNORA74D-201ENST00000516404 141 ntBASIC3.91□□□□□ -1.78
CHMP4CQ96CF2 RNU1-103P-201ENST00000516502 125 ntBASIC3.91□□□□□ -1.78
CHMP4CQ96CF2 RNU6-572P-201ENST00000516724 80 ntBASIC3.91□□□□□ -1.78
CHMP4CQ96CF2 AC009902.1-201ENST00000519351 183 ntBASIC3.91□□□□□ -1.78
CHMP4CQ96CF2 H3F3AP1-201ENST00000559984 334 ntBASIC3.91□□□□□ -1.78
CHMP4CQ96CF2 AC092747.3-201ENST00000603769 301 ntBASIC3.91□□□□□ -1.78
CHMP4CQ96CF2 AL035413.2-201ENST00000604801 525 ntBASIC3.91□□□□□ -1.78
CHMP4CQ96CF2 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
CHMP4CQ96CF2 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CHMP4CQ96CF2 AL049781.1-201ENST00000623195 3585 ntBASIC3.91□□□□□ -1.78
CHMP4CQ96CF2 FAM35CP-201ENST00000554755 2470 ntBASIC3.9□□□□□ -1.78
CHMP4CQ96CF2 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
CHMP4CQ96CF2 MTND5P27-201ENST00000428871 1720 ntBASIC3.9□□□□□ -1.78
CHMP4CQ96CF2 RNU1-70P-201ENST00000362618 164 ntBASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 Y_RNA.86-201ENST00000363020 111 ntBASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 Y_RNA.378-201ENST00000365652 113 ntBASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 Y_RNA.399-201ENST00000383955 105 ntBASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 RNA5SP219-201ENST00000390940 113 ntBASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 AL356776.1-201ENST00000406574 447 ntBASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 POLHP1-201ENST00000411806 470 ntBASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 BX682237.1-201ENST00000415016 335 ntBASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 AC098614.2-201ENST00000426040 255 ntBASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 TRIAP1P1-201ENST00000427062 225 ntBASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 NEK4P1-201ENST00000433383 879 ntBASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 AC010099.1-201ENST00000455434 375 ntBASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 RNU7-167P-201ENST00000459160 62 ntBASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 RNU6-1208P-201ENST00000459588 107 ntBASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 HMGN2P26-201ENST00000463169 339 ntBASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 AC098799.2-201ENST00000509466 868 ntBASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 AC074344.1-201ENST00000512823 224 ntBASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 RNU6-189P-201ENST00000516120 101 ntBASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 RNU6-711P-201ENST00000517255 106 ntBASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 AC118273.2-201ENST00000532092 465 ntBASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 AL118558.2-201ENST00000556294 238 ntBASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 MIR3941-201ENST00000582572 103 ntBASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 AC073539.2-201ENST00000597113 165 ntBASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 AC007938.3-201ENST00000604965 623 ntBASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 AC092807.2-201ENST00000609367 243 ntBASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 AL157817.1-201ENST00000614264 790 ntBASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.9□□□□□ -1.79
CHMP4CQ96CF2 MTND5P7-201ENST00000413558 1798 ntBASIC3.89□□□□□ -1.79
CHMP4CQ96CF2 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.89□□□□□ -1.79
CHMP4CQ96CF2 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.89□□□□□ -1.79
CHMP4CQ96CF2 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CHMP4CQ96CF2 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.89□□□□□ -1.79
CHMP4CQ96CF2 RNU6-658P-201ENST00000384606 106 ntBASIC3.89□□□□□ -1.79
CHMP4CQ96CF2 Y_RNA.615-201ENST00000410769 117 ntBASIC3.89□□□□□ -1.79
CHMP4CQ96CF2 RPL32P35-201ENST00000415214 394 ntBASIC3.89□□□□□ -1.79
CHMP4CQ96CF2 AL353729.1-201ENST00000425044 720 ntBASIC3.89□□□□□ -1.79
CHMP4CQ96CF2 AL353572.1-201ENST00000442490 417 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms