Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 CYCSP39-201ENST00000565821 309 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 MIR5680-201ENST00000577577 84 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.58□□□□□ -2
RFT1Q96AA3 BNIP3P30-201ENST00000601184 574 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 MIR98-201ENST00000606724 119 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 AP001486.3-201ENST00000615334 372 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 AC007014.2-201ENST00000615581 479 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 MIR3199-2-201ENST00000636243 86 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RFT1Q96AA3 AC010889.1-201ENST00000566193 2666 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 AL049781.1-201ENST00000623195 3585 ntBASIC2.58□□□□□ -2
RFT1Q96AA3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.58□□□□□ -2
RFT1Q96AA3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.58□□□□□ -2
RFT1Q96AA3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
RFT1Q96AA3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.58□□□□□ -2
RFT1Q96AA3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.57□□□□□ -2
RFT1Q96AA3 Y_RNA.33-201ENST00000362591 102 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 RNU6-1090P-201ENST00000364065 94 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 Y_RNA.367-201ENST00000365544 101 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 RNU6-395P-201ENST00000365662 106 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 RNU5A-6P-201ENST00000384136 116 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 SNORA40C-201ENST00000391285 128 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 RNU6-387P-201ENST00000411331 105 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 OR51A5P-201ENST00000415429 942 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 PIGFP2-201ENST00000421400 651 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.57□□□□□ -2
RFT1Q96AA3 AC133104.1-201ENST00000429100 218 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 AC073464.1-201ENST00000429823 534 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 MTATP6P16-201ENST00000434543 526 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 AL353572.1-201ENST00000442490 417 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.57□□□□□ -2
RFT1Q96AA3 AL671855.1-201ENST00000446875 1203 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 DPPA3P1-201ENST00000448050 469 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 PRSS3P4-201ENST00000453323 162 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.57□□□□□ -2
RFT1Q96AA3 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.57□□□□□ -2
RFT1Q96AA3 AC069439.1-201ENST00000494739 167 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 AC116562.3-201ENST00000506136 177 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.57□□□□□ -2
RFT1Q96AA3 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.57□□□□□ -2
RFT1Q96AA3 RNU6-314P-201ENST00000516574 104 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 SCARNA11.3-201ENST00000517276 130 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 MTCO2P4-201ENST00000517968 247 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 AC025755.1-201ENST00000521306 278 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 AC068587.5-201ENST00000528506 175 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.57□□□□□ -2
RFT1Q96AA3 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.57□□□□□ -2
RFT1Q96AA3 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.57□□□□□ -2
RFT1Q96AA3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
RFT1Q96AA3 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.57□□□□□ -2
RFT1Q96AA3 AL451007.1-201ENST00000595491 289 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.57□□□□□ -2
RFT1Q96AA3 AL391813.1-201ENST00000603098 260 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 MIR6134-201ENST00000617606 109 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 AL158209.2-201ENST00000619266 216 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 MIR7975-201ENST00000619350 68 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 AC012314.7-201ENST00000619693 93 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.57□□□□□ -2
RFT1Q96AA3 AC093648.1-201ENST00000623546 606 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 CR381653.2-201ENST00000624041 768 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.57□□□□□ -2
RFT1Q96AA3 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.57□□□□□ -2
RFT1Q96AA3 CDC27P3-201ENST00000635418 1910 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.57□□□□□ -2
RFT1Q96AA3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.57□□□□□ -2
RFT1Q96AA3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
RFT1Q96AA3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
RFT1Q96AA3 MTND5P17-201ENST00000418405 1603 ntBASIC2.57□□□□□ -2
RFT1Q96AA3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.56□□□□□ -2
RFT1Q96AA3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.56□□□□□ -2
RFT1Q96AA3 MIR22-201ENST00000362190 85 ntBASIC2.56□□□□□ -2
RFT1Q96AA3 RNU1-35P-201ENST00000362782 153 ntBASIC2.56□□□□□ -2
RFT1Q96AA3 RNU6-179P-201ENST00000363350 107 ntBASIC2.56□□□□□ -2
RFT1Q96AA3 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.56□□□□□ -2
RFT1Q96AA3 RNU6-282P-201ENST00000365357 103 ntBASIC2.56□□□□□ -2
RFT1Q96AA3 SNORA75B-201ENST00000384053 137 ntBASIC2.56□□□□□ -2
RFT1Q96AA3 RNU6-74P-201ENST00000384235 107 ntBASIC2.56□□□□□ -2
RFT1Q96AA3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.56□□□□□ -2
RFT1Q96AA3 RNU6-1025P-201ENST00000410629 104 ntBASIC2.56□□□□□ -2
RFT1Q96AA3 USP9YP6-201ENST00000413550 854 ntBASIC2.56□□□□□ -2
RFT1Q96AA3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.56□□□□□ -2
RFT1Q96AA3 AL160275.3-201ENST00000423876 471 ntBASIC2.56□□□□□ -2
RFT1Q96AA3 USP9YP18-201ENST00000425912 695 ntBASIC2.56□□□□□ -2
RFT1Q96AA3 AC092427.1-202ENST00000430569 476 ntBASIC2.56□□□□□ -2
RFT1Q96AA3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.56□□□□□ -2
RFT1Q96AA3 OSTCP8-201ENST00000445117 448 ntBASIC2.56□□□□□ -2
RFT1Q96AA3 AL672167.3-201ENST00000465951 960 ntBASIC2.56□□□□□ -2
RFT1Q96AA3 RPS3AP17-201ENST00000472594 777 ntBASIC2.56□□□□□ -2
RFT1Q96AA3 AC092989.1-201ENST00000481235 277 ntBASIC2.56□□□□□ -2
RFT1Q96AA3 RNU6-123P-201ENST00000516163 102 ntBASIC2.56□□□□□ -2
RFT1Q96AA3 SNORD27.1-201ENST00000516319 72 ntBASIC2.56□□□□□ -2
RFT1Q96AA3 RNU6-572P-201ENST00000516724 80 ntBASIC2.56□□□□□ -2
RFT1Q96AA3 SNORA31.19-201ENST00000517079 126 ntBASIC2.56□□□□□ -2
RFT1Q96AA3 RNU6-685P-201ENST00000517088 95 ntBASIC2.56□□□□□ -2
RFT1Q96AA3 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.56□□□□□ -2
RFT1Q96AA3 ADI1P3-201ENST00000549509 470 ntBASIC2.56□□□□□ -2
RFT1Q96AA3 AC007151.1-201ENST00000572774 483 ntBASIC2.56□□□□□ -2
RFT1Q96AA3 AC009163.5-201ENST00000575421 637 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms