Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 IFNA20P-201ENST00000436840 528 ntBASIC3.74□□□□□ -1.81
HPS3Q969F9 USP9YP8-201ENST00000441913 500 ntBASIC3.74□□□□□ -1.81
HPS3Q969F9 RPL37P4-201ENST00000448908 268 ntBASIC3.74□□□□□ -1.81
HPS3Q969F9 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.74□□□□□ -1.81
HPS3Q969F9 AC008155.2-201ENST00000464337 397 ntBASIC3.74□□□□□ -1.81
HPS3Q969F9 RPL23AP14-201ENST00000468281 468 ntBASIC3.74□□□□□ -1.81
HPS3Q969F9 TRBVA-201ENST00000498804 316 ntBASIC3.74□□□□□ -1.81
HPS3Q969F9 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.74□□□□□ -1.81
HPS3Q969F9 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HPS3Q969F9 SNORA19.2-201ENST00000516013 114 ntBASIC3.74□□□□□ -1.81
HPS3Q969F9 SNORA14.1-201ENST00000516113 141 ntBASIC3.74□□□□□ -1.81
HPS3Q969F9 SNORA74D-201ENST00000516404 141 ntBASIC3.74□□□□□ -1.81
HPS3Q969F9 MIR892C-201ENST00000516410 77 ntBASIC3.74□□□□□ -1.81
HPS3Q969F9 RNU6-572P-201ENST00000516724 80 ntBASIC3.74□□□□□ -1.81
HPS3Q969F9 SNORA31.19-201ENST00000517079 126 ntBASIC3.74□□□□□ -1.81
HPS3Q969F9 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.74□□□□□ -1.81
HPS3Q969F9 AC009902.1-201ENST00000519351 183 ntBASIC3.74□□□□□ -1.81
HPS3Q969F9 AC107953.1-201ENST00000522216 297 ntBASIC3.74□□□□□ -1.81
HPS3Q969F9 BNIP3P25-201ENST00000596023 559 ntBASIC3.74□□□□□ -1.81
HPS3Q969F9 AL645944.1-201ENST00000603857 493 ntBASIC3.74□□□□□ -1.81
HPS3Q969F9 AC104260.1-201ENST00000616660 539 ntBASIC3.74□□□□□ -1.81
HPS3Q969F9 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.74□□□□□ -1.81
HPS3Q969F9 U6.99-201ENST00000637524 83 ntBASIC3.74□□□□□ -1.81
HPS3Q969F9 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
HPS3Q969F9 MFSD8-233ENST00000641482 4860 ntBASIC3.74□□□□□ -1.81
HPS3Q969F9 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
HPS3Q969F9 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
HPS3Q969F9 AC110774.1-201ENST00000623567 2018 ntBASIC3.73□□□□□ -1.81
HPS3Q969F9 AL356274.2-201ENST00000624379 3752 ntBASIC3.73□□□□□ -1.81
HPS3Q969F9 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
HPS3Q969F9 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
HPS3Q969F9 RNU1-70P-201ENST00000362618 164 ntBASIC3.73□□□□□ -1.81
HPS3Q969F9 RNU6-884P-201ENST00000363889 107 ntBASIC3.73□□□□□ -1.81
HPS3Q969F9 Y_RNA.414-201ENST00000384011 101 ntBASIC3.73□□□□□ -1.81
HPS3Q969F9 RNU6-1009P-201ENST00000390996 107 ntBASIC3.73□□□□□ -1.81
HPS3Q969F9 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.73□□□□□ -1.81
HPS3Q969F9 RN7SKP32-201ENST00000410167 303 ntBASIC3.73□□□□□ -1.81
HPS3Q969F9 RNU6-55P-201ENST00000411092 107 ntBASIC3.73□□□□□ -1.81
HPS3Q969F9 Y_RNA.623-201ENST00000411128 95 ntBASIC3.73□□□□□ -1.81
HPS3Q969F9 RNU6-954P-201ENST00000411355 107 ntBASIC3.73□□□□□ -1.81
HPS3Q969F9 RPL26P27-201ENST00000414397 437 ntBASIC3.73□□□□□ -1.81
HPS3Q969F9 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.73□□□□□ -1.81
HPS3Q969F9 AC098614.2-201ENST00000426040 255 ntBASIC3.73□□□□□ -1.81
HPS3Q969F9 MYL8P-204ENST00000431574 518 ntBASIC3.73□□□□□ -1.81
HPS3Q969F9 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.73□□□□□ -1.81
HPS3Q969F9 AL078601.1-201ENST00000444542 271 ntBASIC3.73□□□□□ -1.81
HPS3Q969F9 NDUFB1P2-201ENST00000449477 176 ntBASIC3.73□□□□□ -1.81
HPS3Q969F9 AC006539.3-201ENST00000454258 129 ntBASIC3.73□□□□□ -1.81
HPS3Q969F9 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.73□□□□□ -1.81
HPS3Q969F9 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.73□□□□□ -1.81
HPS3Q969F9 TBCAP3-201ENST00000512475 312 ntBASIC3.73□□□□□ -1.81
HPS3Q969F9 AP000889.1-201ENST00000530968 660 ntBASIC3.73□□□□□ -1.81
HPS3Q969F9 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.73□□□□□ -1.81
HPS3Q969F9 MIR4782-201ENST00000577987 79 ntBASIC3.73□□□□□ -1.81
HPS3Q969F9 LRRC37A5P-203ENST00000580181 585 ntBASIC3.73□□□□□ -1.81
HPS3Q969F9 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.73□□□□□ -1.81
HPS3Q969F9 MIR7851-201ENST00000610611 160 ntBASIC3.73□□□□□ -1.81
HPS3Q969F9 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.73□□□□□ -1.81
HPS3Q969F9 SNORA50A-202ENST00000629536 136 ntBASIC3.73□□□□□ -1.81
HPS3Q969F9 MTCO1P12-201ENST00000414273 1543 ntBASIC3.73□□□□□ -1.81
HPS3Q969F9 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.73□□□□□ -1.81
HPS3Q969F9 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.73□□□□□ -1.81
HPS3Q969F9 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
HPS3Q969F9 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
HPS3Q969F9 AL021368.2-201ENST00000606125 5352 ntBASIC3.72□□□□□ -1.81
HPS3Q969F9 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.72□□□□□ -1.81
HPS3Q969F9 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
HPS3Q969F9 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.72□□□□□ -1.81
HPS3Q969F9 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HPS3Q969F9 Y_RNA.70-201ENST00000362886 110 ntBASIC3.72□□□□□ -1.81
HPS3Q969F9 Y_RNA.167-201ENST00000363735 109 ntBASIC3.72□□□□□ -1.81
HPS3Q969F9 SNORA40C-201ENST00000391285 128 ntBASIC3.72□□□□□ -1.81
HPS3Q969F9 AC099548.1-201ENST00000421443 426 ntBASIC3.72□□□□□ -1.81
HPS3Q969F9 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.72□□□□□ -1.81
HPS3Q969F9 AL627311.1-201ENST00000431514 115 ntBASIC3.72□□□□□ -1.81
HPS3Q969F9 BX679664.1-201ENST00000434429 253 ntBASIC3.72□□□□□ -1.81
HPS3Q969F9 MTND4LP16-201ENST00000440828 295 ntBASIC3.72□□□□□ -1.81
HPS3Q969F9 MTATP6P7-201ENST00000453315 681 ntBASIC3.72□□□□□ -1.81
HPS3Q969F9 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.72□□□□□ -1.81
HPS3Q969F9 AC010401.1-201ENST00000463867 348 ntBASIC3.72□□□□□ -1.81
HPS3Q969F9 CENPBD1P1-201ENST00000464061 469 ntBASIC3.72□□□□□ -1.81
HPS3Q969F9 RNU4-49P-201ENST00000516080 140 ntBASIC3.72□□□□□ -1.81
HPS3Q969F9 RNU1-103P-201ENST00000516502 125 ntBASIC3.72□□□□□ -1.81
HPS3Q969F9 AC107934.2-201ENST00000518653 310 ntBASIC3.72□□□□□ -1.81
HPS3Q969F9 AC090136.1-201ENST00000520009 240 ntBASIC3.72□□□□□ -1.81
HPS3Q969F9 AC093331.1-201ENST00000521474 169 ntBASIC3.72□□□□□ -1.81
HPS3Q969F9 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.72□□□□□ -1.81
HPS3Q969F9 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.72□□□□□ -1.81
HPS3Q969F9 AC005668.1-201ENST00000571142 476 ntBASIC3.72□□□□□ -1.81
HPS3Q969F9 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.72□□□□□ -1.81
HPS3Q969F9 AL162713.1-201ENST00000604480 262 ntBASIC3.72□□□□□ -1.81
HPS3Q969F9 AC007938.3-201ENST00000604965 623 ntBASIC3.72□□□□□ -1.81
HPS3Q969F9 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.72□□□□□ -1.81
HPS3Q969F9 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
HPS3Q969F9 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HPS3Q969F9 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
HPS3Q969F9 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
HPS3Q969F9 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HPS3Q969F9 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
HPS3Q969F9 Y_RNA.166-201ENST00000363730 102 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms