Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SMIM11P1-201ENST00000369586 178 ntBASIC3.1□□□□□ -1.91
LMO3Q8TAP4 SNORD116-29-201ENST00000384516 83 ntBASIC3.1□□□□□ -1.91
LMO3Q8TAP4 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.1□□□□□ -1.91
LMO3Q8TAP4 AL592114.1-201ENST00000403842 483 ntBASIC3.1□□□□□ -1.91
LMO3Q8TAP4 RNU4-46P-201ENST00000410818 138 ntBASIC3.1□□□□□ -1.91
LMO3Q8TAP4 MTND2P23-201ENST00000422990 651 ntBASIC3.1□□□□□ -1.91
LMO3Q8TAP4 RAC1P6-201ENST00000423911 575 ntBASIC3.1□□□□□ -1.91
LMO3Q8TAP4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.1□□□□□ -1.91
LMO3Q8TAP4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.1□□□□□ -1.91
LMO3Q8TAP4 AL139132.1-201ENST00000431587 344 ntBASIC3.1□□□□□ -1.91
LMO3Q8TAP4 VDAC1P3-201ENST00000434069 851 ntBASIC3.1□□□□□ -1.91
LMO3Q8TAP4 AC244505.4-201ENST00000434905 287 ntBASIC3.1□□□□□ -1.91
LMO3Q8TAP4 MTCO3P45-201ENST00000443036 613 ntBASIC3.1□□□□□ -1.91
LMO3Q8TAP4 SSXP5-201ENST00000443473 287 ntBASIC3.1□□□□□ -1.91
LMO3Q8TAP4 NIPA2P5-201ENST00000452282 464 ntBASIC3.1□□□□□ -1.91
LMO3Q8TAP4 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.1□□□□□ -1.91
LMO3Q8TAP4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.1□□□□□ -1.91
LMO3Q8TAP4 RPS4XP13-201ENST00000483219 789 ntBASIC3.1□□□□□ -1.91
LMO3Q8TAP4 RN7SL432P-201ENST00000484057 298 ntBASIC3.1□□□□□ -1.91
LMO3Q8TAP4 RBBP4P6-201ENST00000508098 202 ntBASIC3.1□□□□□ -1.91
LMO3Q8TAP4 AC108078.2-201ENST00000510750 236 ntBASIC3.1□□□□□ -1.91
LMO3Q8TAP4 AC005741.1-201ENST00000511094 432 ntBASIC3.1□□□□□ -1.91
LMO3Q8TAP4 RNA5SP341-201ENST00000516261 117 ntBASIC3.1□□□□□ -1.91
LMO3Q8TAP4 AP000889.2-201ENST00000532684 490 ntBASIC3.1□□□□□ -1.91
LMO3Q8TAP4 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.1□□□□□ -1.91
LMO3Q8TAP4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.1□□□□□ -1.91
LMO3Q8TAP4 AL670379.11-201ENST00000604059 253 ntBASIC3.1□□□□□ -1.91
LMO3Q8TAP4 AL670379.10-201ENST00000604330 253 ntBASIC3.1□□□□□ -1.91
LMO3Q8TAP4 AL360085.1-201ENST00000604713 532 ntBASIC3.1□□□□□ -1.91
LMO3Q8TAP4 AL670379.12-201ENST00000605291 253 ntBASIC3.1□□□□□ -1.91
LMO3Q8TAP4 AL670379.9-201ENST00000605428 253 ntBASIC3.1□□□□□ -1.91
LMO3Q8TAP4 AL162730.1-201ENST00000605734 292 ntBASIC3.1□□□□□ -1.91
LMO3Q8TAP4 AC012531.5-201ENST00000611375 151 ntBASIC3.1□□□□□ -1.91
LMO3Q8TAP4 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
LMO3Q8TAP4 AC090971.5-201ENST00000621102 293 ntBASIC3.1□□□□□ -1.91
LMO3Q8TAP4 DDX10P1-201ENST00000448545 1933 ntBASIC3.1□□□□□ -1.91
LMO3Q8TAP4 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.1□□□□□ -1.91
LMO3Q8TAP4 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LMO3Q8TAP4 AL139811.1-201ENST00000424779 2299 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 AP001350.1-201ENST00000601906 1524 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
LMO3Q8TAP4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LMO3Q8TAP4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.09□□□□□ -1.91
LMO3Q8TAP4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
LMO3Q8TAP4 RNU6-1287P-201ENST00000362914 107 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 RNU6-254P-201ENST00000363377 107 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 RNU6-1155P-201ENST00000363554 107 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 RNU6-263P-201ENST00000363811 107 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.09□□□□□ -1.91
LMO3Q8TAP4 RNU6-946P-201ENST00000383878 107 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 RNU6-738P-201ENST00000384531 106 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 RNU6-1127P-201ENST00000384580 107 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 RNU6-1060P-201ENST00000384664 107 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 MIR559-201ENST00000385188 96 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 RNU6-550P-201ENST00000391057 101 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
LMO3Q8TAP4 RNU4-78P-201ENST00000410940 126 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.09□□□□□ -1.91
LMO3Q8TAP4 RPL29P29-201ENST00000448725 423 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.09□□□□□ -1.91
LMO3Q8TAP4 RNU7-152P-201ENST00000458982 64 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 VN1R17P-201ENST00000472048 1090 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 RPL7P43-201ENST00000478876 753 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 AC012181.1-201ENST00000479895 423 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 AC027575.1-201ENST00000481064 460 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.09□□□□□ -1.91
LMO3Q8TAP4 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.09□□□□□ -1.91
LMO3Q8TAP4 RNU6-1170P-201ENST00000515974 106 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 RNU6-327P-201ENST00000516270 127 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 RNU6-1045P-201ENST00000516321 107 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.09□□□□□ -1.91
LMO3Q8TAP4 ELOCP31-201ENST00000540463 467 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.09□□□□□ -1.91
LMO3Q8TAP4 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.09□□□□□ -1.91
LMO3Q8TAP4 MIR4458-201ENST00000578872 75 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 MIR4325-201ENST00000583049 90 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 MIR3171-201ENST00000584270 74 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 MIR3672-201ENST00000584290 82 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 AL670379.6-201ENST00000603753 252 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 SNRPGP17-201ENST00000603780 214 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 AC008162.1-201ENST00000604718 254 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 AL670379.1-201ENST00000604752 252 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 IGHV3-29-201ENST00000604817 344 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 AL670379.5-201ENST00000605253 252 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 AL670379.8-201ENST00000605353 252 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 AL670379.7-201ENST00000605823 252 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 AC103705.1-201ENST00000619013 241 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 AL359757.2-201ENST00000624309 274 ntBASIC3.09□□□□□ -1.91
LMO3Q8TAP4 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.09□□□□□ -1.91
LMO3Q8TAP4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.09□□□□□ -1.91
LMO3Q8TAP4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
LMO3Q8TAP4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
LMO3Q8TAP4 MTND4P27-201ENST00000450813 1354 ntBASIC3.09□□□□□ -1.92
LMO3Q8TAP4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
LMO3Q8TAP4 AL592437.2-201ENST00000421655 2434 ntBASIC3.09□□□□□ -1.92
LMO3Q8TAP4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
LMO3Q8TAP4 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
LMO3Q8TAP4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
LMO3Q8TAP4 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
LMO3Q8TAP4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms