Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC112Q8NEF3 MIR3167-201ENST00000579623 85 ntBASIC1.59□□□□□ -2.15
CCDC112Q8NEF3 SEPT7P9-203ENST00000604116 343 ntBASIC1.59□□□□□ -2.15
CCDC112Q8NEF3 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC112Q8NEF3 AC009974.1-201ENST00000608881 455 ntBASIC1.59□□□□□ -2.15
CCDC112Q8NEF3 AC079416.3-201ENST00000624479 549 ntBASIC1.59□□□□□ -2.15
CCDC112Q8NEF3 MIR126-201ENST00000362291 85 ntBASIC1.58□□□□□ -2.16
CCDC112Q8NEF3 Y_RNA.245-201ENST00000364493 95 ntBASIC1.58□□□□□ -2.16
CCDC112Q8NEF3 RNU4-62P-201ENST00000410125 130 ntBASIC1.58□□□□□ -2.16
CCDC112Q8NEF3 USP9YP6-201ENST00000413550 854 ntBASIC1.58□□□□□ -2.16
CCDC112Q8NEF3 RPL26P27-201ENST00000414397 437 ntBASIC1.58□□□□□ -2.16
CCDC112Q8NEF3 VN1R36P-201ENST00000414936 291 ntBASIC1.58□□□□□ -2.16
CCDC112Q8NEF3 MTCYBP38-201ENST00000417160 1123 ntBASIC1.58□□□□□ -2.16
CCDC112Q8NEF3 AC013262.1-201ENST00000426710 252 ntBASIC1.58□□□□□ -2.16
CCDC112Q8NEF3 MTATP6P30-201ENST00000443540 664 ntBASIC1.58□□□□□ -2.16
CCDC112Q8NEF3 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.58□□□□□ -2.16
CCDC112Q8NEF3 AC005410.1-202ENST00000460347 485 ntBASIC1.58□□□□□ -2.16
CCDC112Q8NEF3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.58□□□□□ -2.16
CCDC112Q8NEF3 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
CCDC112Q8NEF3 AC108078.2-201ENST00000510750 236 ntBASIC1.58□□□□□ -2.16
CCDC112Q8NEF3 AC006199.1-201ENST00000548728 219 ntBASIC1.58□□□□□ -2.16
CCDC112Q8NEF3 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.58□□□□□ -2.16
CCDC112Q8NEF3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC112Q8NEF3 ROCK1P1-201ENST00000573767 549 ntBASIC1.58□□□□□ -2.16
CCDC112Q8NEF3 AC103987.3-201ENST00000582071 292 ntBASIC1.58□□□□□ -2.16
CCDC112Q8NEF3 MIR4781-201ENST00000585250 76 ntBASIC1.58□□□□□ -2.16
CCDC112Q8NEF3 AF038458.1-201ENST00000588406 262 ntBASIC1.58□□□□□ -2.16
CCDC112Q8NEF3 AL359821.1-201ENST00000605519 182 ntBASIC1.58□□□□□ -2.16
CCDC112Q8NEF3 AP002802.2-201ENST00000605877 235 ntBASIC1.58□□□□□ -2.16
CCDC112Q8NEF3 AL021368.1-201ENST00000607490 540 ntBASIC1.58□□□□□ -2.16
CCDC112Q8NEF3 AC009237.15-201ENST00000610252 501 ntBASIC1.58□□□□□ -2.16
CCDC112Q8NEF3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.58□□□□□ -2.16
CCDC112Q8NEF3 AC231657.1-201ENST00000624313 397 ntBASIC1.58□□□□□ -2.16
CCDC112Q8NEF3 AL356094.1-201ENST00000624663 1212 ntBASIC1.58□□□□□ -2.16
CCDC112Q8NEF3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.58□□□□□ -2.16
CCDC112Q8NEF3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 RNU6-223P-201ENST00000362830 107 ntBASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 SNORA67.6-201ENST00000391093 99 ntBASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 AP1B1P2-201ENST00000416196 106 ntBASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 UBE2FP1-201ENST00000416536 447 ntBASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 USP9YP26-201ENST00000421008 661 ntBASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 AL161651.1-201ENST00000440882 223 ntBASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 MTCO3P45-201ENST00000443036 613 ntBASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 AC020550.1-201ENST00000447385 163 ntBASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 AC009474.2-201ENST00000451383 136 ntBASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 RPS15AP36-201ENST00000492022 382 ntBASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 RNA5SP165-201ENST00000517142 115 ntBASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 RNU6-1028P-201ENST00000517164 93 ntBASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 DEFB131D-201ENST00000526803 184 ntBASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 AC087441.2-201ENST00000529141 262 ntBASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 AC023538.1-201ENST00000534576 736 ntBASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 MTCYBP23-201ENST00000558717 1102 ntBASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 AC126365.2-201ENST00000580630 379 ntBASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 AC008507.2-201ENST00000588402 1176 ntBASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 AC103810.8-201ENST00000607347 118 ntBASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 AC091304.6-201ENST00000619761 202 ntBASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 AP003485.1-201ENST00000625093 753 ntBASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CCDC112Q8NEF3 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
CCDC112Q8NEF3 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CCDC112Q8NEF3 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC112Q8NEF3 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.56□□□□□ -2.16
CCDC112Q8NEF3 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.56□□□□□ -2.16
CCDC112Q8NEF3 AL160275.3-201ENST00000423876 471 ntBASIC1.56□□□□□ -2.16
CCDC112Q8NEF3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC112Q8NEF3 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.56□□□□□ -2.16
CCDC112Q8NEF3 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.56□□□□□ -2.16
CCDC112Q8NEF3 HSPE1P24-201ENST00000450782 238 ntBASIC1.56□□□□□ -2.16
CCDC112Q8NEF3 TRMT112P2-201ENST00000512910 132 ntBASIC1.56□□□□□ -2.16
CCDC112Q8NEF3 MTND5P13-201ENST00000513046 1079 ntBASIC1.56□□□□□ -2.16
CCDC112Q8NEF3 RNU6-703P-201ENST00000516946 107 ntBASIC1.56□□□□□ -2.16
CCDC112Q8NEF3 AC005832.3-201ENST00000537929 631 ntBASIC1.56□□□□□ -2.16
CCDC112Q8NEF3 AL132657.2-201ENST00000564417 358 ntBASIC1.56□□□□□ -2.16
CCDC112Q8NEF3 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.56□□□□□ -2.16
CCDC112Q8NEF3 BNIP3P25-201ENST00000596023 559 ntBASIC1.56□□□□□ -2.16
CCDC112Q8NEF3 KC877982.1-201ENST00000602313 470 ntBASIC1.56□□□□□ -2.16
CCDC112Q8NEF3 AC021171.1-201ENST00000603137 706 ntBASIC1.56□□□□□ -2.16
CCDC112Q8NEF3 MTCYBP22-201ENST00000603788 447 ntBASIC1.56□□□□□ -2.16
CCDC112Q8NEF3 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
CCDC112Q8NEF3 MIR5739-201ENST00000619803 80 ntBASIC1.56□□□□□ -2.16
CCDC112Q8NEF3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 AC092447.10-201ENST00000620607 1652 ntBASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 RNU6-1167P-201ENST00000363227 94 ntBASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 RNU6-432P-201ENST00000384196 109 ntBASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 MIR758-201ENST00000390227 88 ntBASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 MIR1323-201ENST00000408090 73 ntBASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC1.55□□□□□ -2.16
CCDC112Q8NEF3 RNU6-321P-201ENST00000410912 106 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 145.9 ms