Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.36□□□□□ -1.87
USP38Q8NB14 UBE2V1P10-201ENST00000414685 269 ntBASIC3.36□□□□□ -1.87
USP38Q8NB14 BMS1P22-201ENST00000414726 313 ntBASIC3.36□□□□□ -1.87
USP38Q8NB14 MTCYBP8-201ENST00000422855 651 ntBASIC3.36□□□□□ -1.87
USP38Q8NB14 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.36□□□□□ -1.87
USP38Q8NB14 AL160275.3-201ENST00000423876 471 ntBASIC3.36□□□□□ -1.87
USP38Q8NB14 CALM2P2-201ENST00000428512 440 ntBASIC3.36□□□□□ -1.87
USP38Q8NB14 RPS12P18-201ENST00000442381 270 ntBASIC3.36□□□□□ -1.87
USP38Q8NB14 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.36□□□□□ -1.87
USP38Q8NB14 NDUFAF4P4-201ENST00000454883 502 ntBASIC3.36□□□□□ -1.87
USP38Q8NB14 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.36□□□□□ -1.87
USP38Q8NB14 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.36□□□□□ -1.87
USP38Q8NB14 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.36□□□□□ -1.87
USP38Q8NB14 AC083906.5-201ENST00000503722 328 ntBASIC3.36□□□□□ -1.87
USP38Q8NB14 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.36□□□□□ -1.87
USP38Q8NB14 AC109927.2-201ENST00000506416 303 ntBASIC3.36□□□□□ -1.87
USP38Q8NB14 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.36□□□□□ -1.87
USP38Q8NB14 SNORA31.26-201ENST00000517250 137 ntBASIC3.36□□□□□ -1.87
USP38Q8NB14 AC107016.2-201ENST00000547968 190 ntBASIC3.36□□□□□ -1.87
USP38Q8NB14 MTATP6P3-201ENST00000581686 676 ntBASIC3.36□□□□□ -1.87
USP38Q8NB14 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.36□□□□□ -1.87
USP38Q8NB14 AL138889.2-201ENST00000603883 242 ntBASIC3.36□□□□□ -1.87
USP38Q8NB14 AC008945.2-201ENST00000606056 604 ntBASIC3.36□□□□□ -1.87
USP38Q8NB14 AC004492.1-201ENST00000607036 742 ntBASIC3.36□□□□□ -1.87
USP38Q8NB14 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.36□□□□□ -1.87
USP38Q8NB14 AC017083.3-201ENST00000609955 700 ntBASIC3.36□□□□□ -1.87
USP38Q8NB14 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.36□□□□□ -1.87
USP38Q8NB14 MTND4P35-201ENST00000604257 1375 ntBASIC3.36□□□□□ -1.87
USP38Q8NB14 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.36□□□□□ -1.87
USP38Q8NB14 MTND5P19-201ENST00000424872 1794 ntBASIC3.35□□□□□ -1.87
USP38Q8NB14 AC008264.2-201ENST00000610193 3731 ntBASIC3.35□□□□□ -1.87
USP38Q8NB14 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
USP38Q8NB14 Y_RNA.6-201ENST00000362350 114 ntBASIC3.35□□□□□ -1.87
USP38Q8NB14 RNU6-996P-201ENST00000365438 107 ntBASIC3.35□□□□□ -1.87
USP38Q8NB14 Y_RNA.534-201ENST00000384599 112 ntBASIC3.35□□□□□ -1.87
USP38Q8NB14 Y_RNA.554-201ENST00000384672 102 ntBASIC3.35□□□□□ -1.87
USP38Q8NB14 SNORD37.1-201ENST00000390968 65 ntBASIC3.35□□□□□ -1.87
USP38Q8NB14 RNU6-1158P-201ENST00000391167 107 ntBASIC3.35□□□□□ -1.87
USP38Q8NB14 AL031779.1-201ENST00000415663 330 ntBASIC3.35□□□□□ -1.87
USP38Q8NB14 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.35□□□□□ -1.87
USP38Q8NB14 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.35□□□□□ -1.87
USP38Q8NB14 HMGN2P30-201ENST00000423237 256 ntBASIC3.35□□□□□ -1.87
USP38Q8NB14 AC022018.1-201ENST00000430685 241 ntBASIC3.35□□□□□ -1.87
USP38Q8NB14 RPL26P9-201ENST00000457466 433 ntBASIC3.35□□□□□ -1.87
USP38Q8NB14 AC126182.1-201ENST00000478134 357 ntBASIC3.35□□□□□ -1.87
USP38Q8NB14 RPS29P20-201ENST00000489592 171 ntBASIC3.35□□□□□ -1.87
USP38Q8NB14 RNU6-1315P-201ENST00000517187 99 ntBASIC3.35□□□□□ -1.87
USP38Q8NB14 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.35□□□□□ -1.87
USP38Q8NB14 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.35□□□□□ -1.87
USP38Q8NB14 AP003034.1-201ENST00000534621 422 ntBASIC3.35□□□□□ -1.87
USP38Q8NB14 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.35□□□□□ -1.87
USP38Q8NB14 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.35□□□□□ -1.87
USP38Q8NB14 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.35□□□□□ -1.87
USP38Q8NB14 MIR4703-201ENST00000577728 79 ntBASIC3.35□□□□□ -1.87
USP38Q8NB14 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.35□□□□□ -1.87
USP38Q8NB14 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.35□□□□□ -1.87
USP38Q8NB14 AC005609.4-201ENST00000625071 447 ntBASIC3.35□□□□□ -1.87
USP38Q8NB14 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.35□□□□□ -1.87
USP38Q8NB14 AC243829.7-201ENST00000633081 225 ntBASIC3.35□□□□□ -1.87
USP38Q8NB14 U6.99-201ENST00000637524 83 ntBASIC3.35□□□□□ -1.87
USP38Q8NB14 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.35□□□□□ -1.87
USP38Q8NB14 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
USP38Q8NB14 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.35□□□□□ -1.87
USP38Q8NB14 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
USP38Q8NB14 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.34□□□□□ -1.87
USP38Q8NB14 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.34□□□□□ -1.87
USP38Q8NB14 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.34□□□□□ -1.87
USP38Q8NB14 MTND5P7-201ENST00000413558 1798 ntBASIC3.34□□□□□ -1.87
USP38Q8NB14 RNU6-550P-201ENST00000391057 101 ntBASIC3.34□□□□□ -1.87
USP38Q8NB14 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
USP38Q8NB14 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.34□□□□□ -1.87
USP38Q8NB14 RNU6-1025P-201ENST00000410629 104 ntBASIC3.34□□□□□ -1.87
USP38Q8NB14 OR6C66P-201ENST00000414917 930 ntBASIC3.34□□□□□ -1.87
USP38Q8NB14 ZNF885P-201ENST00000420174 1098 ntBASIC3.34□□□□□ -1.87
USP38Q8NB14 TOMM20P4-201ENST00000427861 435 ntBASIC3.34□□□□□ -1.87
USP38Q8NB14 TIMM9P3-201ENST00000428659 274 ntBASIC3.34□□□□□ -1.87
USP38Q8NB14 AL596276.1-201ENST00000434465 418 ntBASIC3.34□□□□□ -1.87
USP38Q8NB14 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.34□□□□□ -1.87
USP38Q8NB14 AC104058.1-201ENST00000448028 297 ntBASIC3.34□□□□□ -1.87
USP38Q8NB14 AL356010.1-201ENST00000456364 102 ntBASIC3.34□□□□□ -1.87
USP38Q8NB14 AC104472.2-201ENST00000469035 601 ntBASIC3.34□□□□□ -1.87
USP38Q8NB14 EIF4EP3-201ENST00000498782 656 ntBASIC3.34□□□□□ -1.87
USP38Q8NB14 AC092436.1-201ENST00000506450 503 ntBASIC3.34□□□□□ -1.87
USP38Q8NB14 ARL4AP2-201ENST00000507378 601 ntBASIC3.34□□□□□ -1.87
USP38Q8NB14 AC117522.3-201ENST00000507974 584 ntBASIC3.34□□□□□ -1.87
USP38Q8NB14 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.34□□□□□ -1.87
USP38Q8NB14 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.34□□□□□ -1.87
USP38Q8NB14 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.34□□□□□ -1.87
USP38Q8NB14 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.34□□□□□ -1.87
USP38Q8NB14 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.34□□□□□ -1.87
USP38Q8NB14 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
USP38Q8NB14 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.34□□□□□ -1.87
USP38Q8NB14 DUSP12P1-201ENST00000612874 516 ntBASIC3.34□□□□□ -1.87
USP38Q8NB14 AP003122.6-201ENST00000623831 495 ntBASIC3.34□□□□□ -1.87
USP38Q8NB14 AC090617.7-201ENST00000623952 126 ntBASIC3.34□□□□□ -1.87
USP38Q8NB14 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.34□□□□□ -1.87
USP38Q8NB14 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
USP38Q8NB14 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
USP38Q8NB14 RNU6-1322P-201ENST00000364309 107 ntBASIC3.33□□□□□ -1.88
USP38Q8NB14 U3.12-201ENST00000364498 214 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms