Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC245884.12-201ENST00000615364 59 ntBASIC2.15□□□□□ -2.07
CCDC71LQ8N9Z2 AC092656.1-203ENST00000624134 423 ntBASIC2.15□□□□□ -2.07
CCDC71LQ8N9Z2 AC010889.1-201ENST00000566193 2666 ntBASIC2.15□□□□□ -2.07
CCDC71LQ8N9Z2 AL355596.1-201ENST00000565399 3996 ntBASIC2.15□□□□□ -2.07
CCDC71LQ8N9Z2 ELF2P3-201ENST00000445099 1506 ntBASIC2.15□□□□□ -2.07
CCDC71LQ8N9Z2 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CCDC71LQ8N9Z2 AC110491.1-201ENST00000562191 2010 ntBASIC2.15□□□□□ -2.07
CCDC71LQ8N9Z2 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 ZNF658B-202ENST00000615961 3375 ntBASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 NACAP2-201ENST00000318548 624 ntBASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 SNORA6-201ENST00000384033 151 ntBASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 RNU6-456P-201ENST00000384493 107 ntBASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 RPL26P27-201ENST00000414397 437 ntBASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 RPS3AP12-201ENST00000443616 753 ntBASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 NANOGNBP1-201ENST00000448444 480 ntBASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 AC079448.1-201ENST00000449377 373 ntBASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 MTCO2P18-201ENST00000457151 658 ntBASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 TPT1P7-201ENST00000458300 517 ntBASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 RNU6-581P-201ENST00000516214 105 ntBASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 AC090572.1-201ENST00000519251 160 ntBASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 AC021739.1-201ENST00000559631 174 ntBASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 AC023824.2-201ENST00000566185 400 ntBASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 AL391840.1-201ENST00000571144 367 ntBASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 AL139286.2-201ENST00000606838 396 ntBASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 AL589743.7-201ENST00000612637 233 ntBASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 AC005332.10-201ENST00000612725 619 ntBASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 AC011939.3-201ENST00000613686 466 ntBASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 AC099842.1-201ENST00000619919 596 ntBASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 MTND5P42-201ENST00000637720 498 ntBASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 AC073346.2-201ENST00000624724 2058 ntBASIC2.14□□□□□ -2.07
CCDC71LQ8N9Z2 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 RNU6-181P-201ENST00000363225 107 ntBASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 U8.8-201ENST00000365399 135 ntBASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 SNORA24.1-201ENST00000384401 135 ntBASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 Y_RNA.559-201ENST00000384686 107 ntBASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 RNU6-1328P-201ENST00000410938 106 ntBASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 AF274854.1-201ENST00000413236 615 ntBASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 EEF1A1P41-201ENST00000414667 207 ntBASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 RPLP0P7-201ENST00000416050 667 ntBASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 USP9YP20-201ENST00000419224 558 ntBASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 AC133104.1-201ENST00000429100 218 ntBASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 USP9YP14-201ENST00000430663 563 ntBASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 GPR143P-201ENST00000434155 205 ntBASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 MTATP6P16-201ENST00000434543 526 ntBASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 C1DP4-201ENST00000455429 424 ntBASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 AC108078.2-201ENST00000510750 236 ntBASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 RNU6-123P-201ENST00000516163 102 ntBASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 RNU6-914P-201ENST00000516749 109 ntBASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 RNU6-445P-201ENST00000516949 107 ntBASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 RNU6-410P-201ENST00000517006 107 ntBASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 MTCO2P4-201ENST00000517968 247 ntBASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 AC025755.1-201ENST00000521306 278 ntBASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 AP003392.2-201ENST00000527269 208 ntBASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 AP001646.1-201ENST00000527936 915 ntBASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 AC024909.2-201ENST00000553035 286 ntBASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 AL121821.2-201ENST00000556081 394 ntBASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 AC009127.3-201ENST00000570531 403 ntBASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 AC068790.2-201ENST00000602601 557 ntBASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 AC004520.1-201ENST00000608362 1413 ntBASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.13□□□□□ -2.07
CCDC71LQ8N9Z2 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 Y_RNA.318-201ENST00000365131 97 ntBASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 OR5H15-201ENST00000383696 930 ntBASIC2.12□□□□□ -2.07
CCDC71LQ8N9Z2 SNORA9-201ENST00000384215 133 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms