Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 uc_338.14-201ENST00000613162 166 ntBASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 AC104010.1-201ENST00000616889 150 ntBASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.09□□□□□ -2.07
NUDCD3Q8IVD9 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.09□□□□□ -2.08
NUDCD3Q8IVD9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 AL109809.4-201ENST00000603520 2185 ntBASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 AL359854.1-201ENST00000614203 1594 ntBASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 RNU6-500P-201ENST00000362349 107 ntBASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 RNU6-501P-201ENST00000364072 100 ntBASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 SNORA4.3-201ENST00000365564 137 ntBASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 MIR634-201ENST00000385208 97 ntBASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 AC006366.1-201ENST00000422002 759 ntBASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 AC011233.1-201ENST00000422812 283 ntBASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 HMGN2P38-201ENST00000423806 265 ntBASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 AL593851.1-201ENST00000426171 157 ntBASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 GPM6BP3-201ENST00000442797 145 ntBASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 MTND1P12-201ENST00000455231 147 ntBASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 AC093899.1-201ENST00000457984 376 ntBASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 AL139824.2-201ENST00000458731 1095 ntBASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 RPL23AP49-201ENST00000492925 468 ntBASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 AC022493.1-201ENST00000492984 337 ntBASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 LAMTOR3P2-201ENST00000504479 232 ntBASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 RNU2-10P-201ENST00000516375 211 ntBASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 RNU6-677P-201ENST00000516914 101 ntBASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 AC069294.1-201ENST00000608397 350 ntBASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 AL161423.1-201ENST00000613700 262 ntBASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 MIR6134-201ENST00000617606 109 ntBASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 AC006927.3-201ENST00000638789 384 ntBASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 CDC27P3-201ENST00000635418 1910 ntBASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.08□□□□□ -2.08
NUDCD3Q8IVD9 RNU6-898P-201ENST00000365627 104 ntBASIC2.07□□□□□ -2.08
NUDCD3Q8IVD9 RNU6-946P-201ENST00000383878 107 ntBASIC2.07□□□□□ -2.08
NUDCD3Q8IVD9 MIR301A-201ENST00000385261 86 ntBASIC2.07□□□□□ -2.08
NUDCD3Q8IVD9 SNORD115.1-201ENST00000391109 76 ntBASIC2.07□□□□□ -2.08
NUDCD3Q8IVD9 MTCYBP36-201ENST00000404146 440 ntBASIC2.07□□□□□ -2.08
NUDCD3Q8IVD9 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
NUDCD3Q8IVD9 BX276092.3-201ENST00000424182 230 ntBASIC2.07□□□□□ -2.08
NUDCD3Q8IVD9 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.07□□□□□ -2.08
NUDCD3Q8IVD9 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.07□□□□□ -2.08
NUDCD3Q8IVD9 AL008629.1-201ENST00000438615 184 ntBASIC2.07□□□□□ -2.08
NUDCD3Q8IVD9 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.07□□□□□ -2.08
NUDCD3Q8IVD9 AC079804.2-201ENST00000490376 200 ntBASIC2.07□□□□□ -2.08
NUDCD3Q8IVD9 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.07□□□□□ -2.08
NUDCD3Q8IVD9 SCARNA16.3-201ENST00000516595 184 ntBASIC2.07□□□□□ -2.08
NUDCD3Q8IVD9 RNU6-914P-201ENST00000516749 109 ntBASIC2.07□□□□□ -2.08
NUDCD3Q8IVD9 SNORA31.19-201ENST00000517079 126 ntBASIC2.07□□□□□ -2.08
NUDCD3Q8IVD9 RNU6-1315P-201ENST00000517187 99 ntBASIC2.07□□□□□ -2.08
NUDCD3Q8IVD9 AC002400.1-201ENST00000569310 726 ntBASIC2.07□□□□□ -2.08
NUDCD3Q8IVD9 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
NUDCD3Q8IVD9 AC105245.1-201ENST00000581934 244 ntBASIC2.07□□□□□ -2.08
NUDCD3Q8IVD9 MTCYBP22-201ENST00000603788 447 ntBASIC2.07□□□□□ -2.08
NUDCD3Q8IVD9 APOOP1-201ENST00000604695 592 ntBASIC2.07□□□□□ -2.08
NUDCD3Q8IVD9 AL355816.2-201ENST00000610049 647 ntBASIC2.07□□□□□ -2.08
NUDCD3Q8IVD9 AC025048.6-202ENST00000627667 438 ntBASIC2.07□□□□□ -2.08
NUDCD3Q8IVD9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
NUDCD3Q8IVD9 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
NUDCD3Q8IVD9 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NUDCD3Q8IVD9 RNU6-190P-201ENST00000384154 102 ntBASIC2.06□□□□□ -2.08
NUDCD3Q8IVD9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
NUDCD3Q8IVD9 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.06□□□□□ -2.08
NUDCD3Q8IVD9 HIGD1AP15-201ENST00000416198 280 ntBASIC2.06□□□□□ -2.08
NUDCD3Q8IVD9 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.06□□□□□ -2.08
NUDCD3Q8IVD9 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.06□□□□□ -2.08
NUDCD3Q8IVD9 AL591704.1-201ENST00000432574 275 ntBASIC2.06□□□□□ -2.08
NUDCD3Q8IVD9 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.06□□□□□ -2.08
NUDCD3Q8IVD9 AL512286.1-201ENST00000439244 400 ntBASIC2.06□□□□□ -2.08
NUDCD3Q8IVD9 PSPHP1-201ENST00000450062 261 ntBASIC2.06□□□□□ -2.08
NUDCD3Q8IVD9 AL590365.1-201ENST00000450788 243 ntBASIC2.06□□□□□ -2.08
NUDCD3Q8IVD9 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.06□□□□□ -2.08
NUDCD3Q8IVD9 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.06□□□□□ -2.08
NUDCD3Q8IVD9 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.06□□□□□ -2.08
NUDCD3Q8IVD9 AC080013.2-201ENST00000460866 323 ntBASIC2.06□□□□□ -2.08
NUDCD3Q8IVD9 AC109927.2-201ENST00000506416 303 ntBASIC2.06□□□□□ -2.08
NUDCD3Q8IVD9 AC116655.1-201ENST00000508324 901 ntBASIC2.06□□□□□ -2.08
NUDCD3Q8IVD9 AC118465.1-201ENST00000513820 1271 ntBASIC2.06□□□□□ -2.08
NUDCD3Q8IVD9 SNORA25.11-201ENST00000515935 105 ntBASIC2.06□□□□□ -2.08
NUDCD3Q8IVD9 SNORA3.4-201ENST00000515969 96 ntBASIC2.06□□□□□ -2.08
NUDCD3Q8IVD9 ACA59.2-201ENST00000517061 156 ntBASIC2.06□□□□□ -2.08
NUDCD3Q8IVD9 AC011979.2-201ENST00000527568 352 ntBASIC2.06□□□□□ -2.08
NUDCD3Q8IVD9 AL138976.2-201ENST00000563989 694 ntBASIC2.06□□□□□ -2.08
NUDCD3Q8IVD9 MIR5697-201ENST00000578045 78 ntBASIC2.06□□□□□ -2.08
NUDCD3Q8IVD9 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.06□□□□□ -2.08
NUDCD3Q8IVD9 MIR3162-201ENST00000581818 82 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms