Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.66□□□□□ -1.66
NPAS4Q8IUM7 BX276092.3-201ENST00000424182 230 ntBASIC4.66□□□□□ -1.66
NPAS4Q8IUM7 RPL23AP82-202ENST00000427528 469 ntBASIC4.66□□□□□ -1.66
NPAS4Q8IUM7 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.66□□□□□ -1.66
NPAS4Q8IUM7 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.66□□□□□ -1.66
NPAS4Q8IUM7 AL162151.2-201ENST00000448875 158 ntBASIC4.66□□□□□ -1.66
NPAS4Q8IUM7 RNU6-928P-201ENST00000516876 104 ntBASIC4.66□□□□□ -1.66
NPAS4Q8IUM7 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.66□□□□□ -1.66
NPAS4Q8IUM7 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.66□□□□□ -1.66
NPAS4Q8IUM7 AC024153.1-201ENST00000603103 365 ntBASIC4.66□□□□□ -1.66
NPAS4Q8IUM7 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPAS4Q8IUM7 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.66□□□□□ -1.66
NPAS4Q8IUM7 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPAS4Q8IUM7 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPAS4Q8IUM7 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.66□□□□□ -1.66
NPAS4Q8IUM7 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
NPAS4Q8IUM7 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
NPAS4Q8IUM7 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.65□□□□□ -1.66
NPAS4Q8IUM7 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.65□□□□□ -1.66
NPAS4Q8IUM7 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
NPAS4Q8IUM7 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
NPAS4Q8IUM7 RNU6-898P-201ENST00000365627 104 ntBASIC4.65□□□□□ -1.67
NPAS4Q8IUM7 SNORA74C-2-201ENST00000411179 201 ntBASIC4.65□□□□□ -1.67
NPAS4Q8IUM7 AL591043.1-201ENST00000432461 424 ntBASIC4.65□□□□□ -1.67
NPAS4Q8IUM7 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NPAS4Q8IUM7 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NPAS4Q8IUM7 PPIAP15-201ENST00000479662 484 ntBASIC4.65□□□□□ -1.67
NPAS4Q8IUM7 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.65□□□□□ -1.67
NPAS4Q8IUM7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC4.65□□□□□ -1.67
NPAS4Q8IUM7 MIR4429-201ENST00000580105 73 ntBASIC4.65□□□□□ -1.67
NPAS4Q8IUM7 AC012531.5-201ENST00000611375 151 ntBASIC4.65□□□□□ -1.67
NPAS4Q8IUM7 AC103858.2-201ENST00000621471 543 ntBASIC4.65□□□□□ -1.67
NPAS4Q8IUM7 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC4.65□□□□□ -1.67
NPAS4Q8IUM7 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
NPAS4Q8IUM7 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.65□□□□□ -1.67
NPAS4Q8IUM7 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
NPAS4Q8IUM7 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NPAS4Q8IUM7 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.65□□□□□ -1.67
NPAS4Q8IUM7 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.65□□□□□ -1.67
NPAS4Q8IUM7 MAPK10-320ENST00000641462 6696 ntBASIC4.65□□□□□ -1.67
NPAS4Q8IUM7 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
NPAS4Q8IUM7 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 AC008725.1-201ENST00000605123 2263 ntBASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 Y_RNA.14-201ENST00000362415 103 ntBASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 RNA5SP307-201ENST00000362863 116 ntBASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 RNU6-227P-201ENST00000362865 103 ntBASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 Y_RNA.214-201ENST00000364201 112 ntBASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 SNORA20.1-201ENST00000364790 130 ntBASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 RNU6-806P-201ENST00000365147 105 ntBASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 Y_RNA.376-201ENST00000365638 108 ntBASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 Y_RNA.577-201ENST00000384794 101 ntBASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 MIR554-201ENST00000384874 96 ntBASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 RPL21P65-201ENST00000406094 466 ntBASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 AC099548.1-201ENST00000421443 426 ntBASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 ELOCP20-201ENST00000422460 345 ntBASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 MTND5P15-201ENST00000434246 349 ntBASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 AC012308.1-201ENST00000451232 178 ntBASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 AC133473.1-201ENST00000455173 299 ntBASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 RPL23AP81-201ENST00000455252 467 ntBASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 HMGN2P13-201ENST00000476476 274 ntBASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 RN7SL132P-201ENST00000478131 296 ntBASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 RNA5SP446-201ENST00000515955 82 ntBASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 AC023632.4-201ENST00000517783 191 ntBASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 MIR5188-201ENST00000583467 113 ntBASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 AC005046.1-201ENST00000608515 625 ntBASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 uc_338.32-201ENST00000615087 172 ntBASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 MIR6875-201ENST00000617506 72 ntBASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 MIR6134-201ENST00000617606 109 ntBASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 MIR4272-201ENST00000635924 64 ntBASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 ZNF299P-201ENST00000406845 1804 ntBASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
NPAS4Q8IUM7 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.63□□□□□ -1.67
NPAS4Q8IUM7 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
NPAS4Q8IUM7 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
NPAS4Q8IUM7 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
NPAS4Q8IUM7 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
NPAS4Q8IUM7 ADAM3A-203ENST00000461344 2157 ntBASIC4.63□□□□□ -1.67
NPAS4Q8IUM7 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.63□□□□□ -1.67
NPAS4Q8IUM7 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NPAS4Q8IUM7 RNA5SP295-201ENST00000362655 121 ntBASIC4.63□□□□□ -1.67
NPAS4Q8IUM7 Y_RNA.64-201ENST00000362845 102 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms