Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 AC009518.2-201ENST00000418056 731 ntBASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 AC096920.1-201ENST00000423991 241 ntBASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 AL589872.1-201ENST00000426602 288 ntBASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 AL627311.1-201ENST00000431514 115 ntBASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 CALM1P1-201ENST00000442082 433 ntBASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 RNA5SP233-201ENST00000459153 113 ntBASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 snoU109.2-201ENST00000459316 135 ntBASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 AP000797.1-201ENST00000478870 387 ntBASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 AP001025.1-201ENST00000486139 332 ntBASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 CKS1BP2-201ENST00000497342 240 ntBASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 HIGD1AP13-201ENST00000509878 289 ntBASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 MIR5092-201ENST00000583139 88 ntBASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 HMGN1P30-201ENST00000589286 268 ntBASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 BNIP3P33-201ENST00000598912 569 ntBASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 RPL30P11-203ENST00000598995 310 ntBASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 DEFB131E-202ENST00000602581 683 ntBASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 AL138889.2-201ENST00000603883 242 ntBASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 AL359999.1-201ENST00000604513 294 ntBASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 AC021646.1-201ENST00000605469 484 ntBASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 AL451064.1-201ENST00000607718 471 ntBASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 AC096772.1-201ENST00000609146 564 ntBASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 AC012409.4-201ENST00000612923 249 ntBASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 AC027807.2-201ENST00000616099 408 ntBASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 AC017037.3-201ENST00000625016 472 ntBASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 MIR3529-201ENST00000637713 78 ntBASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.68□□□□□ -2.14
MRPL55Q7Z7F7 CKAP2P1-201ENST00000555477 2049 ntBASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 RNU6-858P-201ENST00000362436 107 ntBASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 Y_RNA.22-201ENST00000362492 102 ntBASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 RNU6-384P-201ENST00000364900 104 ntBASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 SNORA18.3-201ENST00000384122 132 ntBASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 SNORA24.1-201ENST00000384401 135 ntBASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 MIR578-201ENST00000384828 96 ntBASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 MIR186-201ENST00000384988 86 ntBASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 MIR9-1-201ENST00000385198 89 ntBASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 MIR561-201ENST00000385216 97 ntBASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 RNU2-48P-201ENST00000410694 191 ntBASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 USP9YP27-201ENST00000418455 438 ntBASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 AC011233.1-201ENST00000422812 283 ntBASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 USP9YP15-201ENST00000442391 422 ntBASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 LINC00888-204ENST00000487386 421 ntBASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 AC026427.2-201ENST00000506228 536 ntBASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 AC108078.2-201ENST00000510750 236 ntBASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 RNU6-123P-201ENST00000516163 102 ntBASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 NDUFA5P6-201ENST00000542110 379 ntBASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 CR383656.8-201ENST00000549046 145 ntBASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 AC093249.1-201ENST00000567049 203 ntBASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 MIR4529-201ENST00000578110 78 ntBASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 AC007229.1-201ENST00000590455 412 ntBASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 AC073410.2-201ENST00000603240 332 ntBASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 AL442067.2-201ENST00000614033 363 ntBASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 AC009878.1-201ENST00000621819 340 ntBASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 HAUS6P2-201ENST00000433254 2404 ntBASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
MRPL55Q7Z7F7 Y_RNA.40-201ENST00000362645 93 ntBASIC1.66□□□□□ -2.14
MRPL55Q7Z7F7 RNU6-529P-201ENST00000363383 104 ntBASIC1.66□□□□□ -2.14
MRPL55Q7Z7F7 RNU6-487P-201ENST00000365430 104 ntBASIC1.66□□□□□ -2.14
MRPL55Q7Z7F7 MIR558-201ENST00000384920 94 ntBASIC1.66□□□□□ -2.14
MRPL55Q7Z7F7 MIR10A-201ENST00000385043 110 ntBASIC1.66□□□□□ -2.14
MRPL55Q7Z7F7 CISD1P1-201ENST00000393907 327 ntBASIC1.66□□□□□ -2.14
MRPL55Q7Z7F7 AL139413.1-201ENST00000421309 217 ntBASIC1.66□□□□□ -2.14
MRPL55Q7Z7F7 MTND5P2-201ENST00000442927 1142 ntBASIC1.66□□□□□ -2.14
MRPL55Q7Z7F7 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.66□□□□□ -2.14
MRPL55Q7Z7F7 AL360271.2-201ENST00000447710 161 ntBASIC1.66□□□□□ -2.14
MRPL55Q7Z7F7 ZNF114P1-201ENST00000453500 292 ntBASIC1.66□□□□□ -2.14
MRPL55Q7Z7F7 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.66□□□□□ -2.14
MRPL55Q7Z7F7 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.66□□□□□ -2.14
MRPL55Q7Z7F7 RPL23AP45-201ENST00000476406 468 ntBASIC1.66□□□□□ -2.14
MRPL55Q7Z7F7 HMGB1P30-201ENST00000492455 606 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms