Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 MTND5P19-201ENST00000424872 1794 ntBASIC2.78□□□□□ -1.96
NUP54Q7Z3B4 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.78□□□□□ -1.96
NUP54Q7Z3B4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.78□□□□□ -1.96
NUP54Q7Z3B4 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
NUP54Q7Z3B4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.78□□□□□ -1.96
NUP54Q7Z3B4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 MTND5P30-201ENST00000452896 1731 ntBASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 AL353743.1-202ENST00000431724 1695 ntBASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 SNORA54-201ENST00000384281 123 ntBASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 CISD1P1-201ENST00000393907 327 ntBASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 RPS4XP8-201ENST00000402039 771 ntBASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 AL160275.3-201ENST00000423876 471 ntBASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 RN7SL75P-201ENST00000461926 281 ntBASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 S100A11P2-201ENST00000467589 312 ntBASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 AC011825.1-201ENST00000484967 388 ntBASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 EIF4EP3-201ENST00000498782 656 ntBASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 AC009902.1-201ENST00000519351 183 ntBASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 AC107016.2-201ENST00000547968 190 ntBASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 AC007938.3-201ENST00000604965 623 ntBASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 uc_338.11-201ENST00000619132 160 ntBASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 OR5AK4P-201ENST00000635912 903 ntBASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 ZNF680P1-201ENST00000436625 1469 ntBASIC2.77□□□□□ -1.97
NUP54Q7Z3B4 MTND4P27-201ENST00000450813 1354 ntBASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 AC073325.2-201ENST00000339545 159 ntBASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 Y_RNA.33-201ENST00000362591 102 ntBASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 SNORA51.4-201ENST00000364993 124 ntBASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 RNU6-395P-201ENST00000365662 106 ntBASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 SNORA48.5-201ENST00000391143 135 ntBASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 RNU2-9P-201ENST00000410194 145 ntBASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 AL353729.1-201ENST00000425044 720 ntBASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 AC022018.1-201ENST00000430685 241 ntBASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 AC003071.1-201ENST00000451219 789 ntBASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 AL356010.1-201ENST00000456364 102 ntBASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 RN7SL633P-201ENST00000488974 297 ntBASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 AC117522.3-201ENST00000507974 584 ntBASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 AC104806.1-201ENST00000508720 308 ntBASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 RNA5SP503-201ENST00000517047 117 ntBASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 AP003034.1-201ENST00000534621 422 ntBASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 AC245505.1-201ENST00000556398 224 ntBASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 AL391813.1-201ENST00000603098 260 ntBASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 AC024940.5-201ENST00000622889 474 ntBASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.76□□□□□ -1.97
NUP54Q7Z3B4 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 AC008264.2-201ENST00000610193 3731 ntBASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 SNORA38-201ENST00000363946 132 ntBASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 RNU1-140P-201ENST00000365040 165 ntBASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 RNU6-851P-201ENST00000384565 107 ntBASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 MIR483-201ENST00000385070 76 ntBASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 RNU6-1025P-201ENST00000410629 104 ntBASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 RNA5SP344-201ENST00000411081 104 ntBASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 RNA5SP111-201ENST00000411386 101 ntBASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 AL031779.1-201ENST00000415663 330 ntBASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 RPL35AP12-201ENST00000425362 338 ntBASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 MICF-203ENST00000432679 129 ntBASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 AL596276.1-201ENST00000434465 418 ntBASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 MTND1P1-201ENST00000445453 368 ntBASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 RN7SL499P-201ENST00000481141 276 ntBASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 RPL9P6-201ENST00000492764 598 ntBASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 AC105417.1-201ENST00000514691 285 ntBASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 SNORA74D-201ENST00000516404 141 ntBASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 AC025755.1-201ENST00000521306 278 ntBASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 AC023824.2-201ENST00000566185 400 ntBASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 MIR3200-201ENST00000580767 85 ntBASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.75□□□□□ -1.97
NUP54Q7Z3B4 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms