Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 PPIAP31-201ENST00000405422 495 ntBASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 AL592148.1-201ENST00000413568 445 ntBASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 AL512844.2-201ENST00000433990 593 ntBASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 AL118496.2-201ENST00000448300 230 ntBASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 AC009220.1-201ENST00000451614 275 ntBASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 AL135752.1-201ENST00000479477 471 ntBASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 RPS4XP22-201ENST00000480755 780 ntBASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 AC011005.2-201ENST00000487324 359 ntBASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 RPL30P5-201ENST00000494923 336 ntBASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 AC026801.1-201ENST00000497178 464 ntBASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 AC092436.3-201ENST00000511788 257 ntBASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 SNORA31.1-201ENST00000515993 133 ntBASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 SNORA31.5-201ENST00000516190 133 ntBASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 AL590392.1-201ENST00000604960 446 ntBASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 AC083809.1-201ENST00000615051 472 ntBASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 MIR6128-201ENST00000615528 109 ntBASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 ATP5A1P2-202ENST00000616464 443 ntBASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 AC010378.1-201ENST00000619270 362 ntBASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTCHD4Q6ZW05 AL049641.1-201ENST00000441055 1948 ntBASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 AL359693.1-201ENST00000614959 2407 ntBASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 MIR412-201ENST00000362142 91 ntBASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 SNORA63-201ENST00000363450 132 ntBASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 RNU6-384P-201ENST00000364900 104 ntBASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 RNA5SP283-201ENST00000365604 119 ntBASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 RNU6-140P-201ENST00000384566 108 ntBASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 MIR141-201ENST00000384975 95 ntBASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 SNORD73A-201ENST00000386062 65 ntBASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 MTCYBP4-201ENST00000401524 249 ntBASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 RNU2-68P-201ENST00000410878 191 ntBASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 RNU6-55P-201ENST00000411092 107 ntBASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 RNU6-954P-201ENST00000411355 107 ntBASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 AC092047.1-201ENST00000424997 240 ntBASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 AC006539.3-201ENST00000454258 129 ntBASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 AL583843.1-201ENST00000456070 346 ntBASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 RN7SL323P-201ENST00000494712 295 ntBASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 AC096745.1-201ENST00000509945 370 ntBASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 AC005741.1-201ENST00000511094 432 ntBASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 AC100830.2-201ENST00000581636 240 ntBASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 ELOCP5-201ENST00000604924 333 ntBASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 AC007938.3-201ENST00000604965 623 ntBASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 AC124303.1-201ENST00000605703 360 ntBASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 MIR378J-201ENST00000611988 109 ntBASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 AC090971.5-201ENST00000621102 293 ntBASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 MIR7153-201ENST00000637758 57 ntBASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PTCHD4Q6ZW05 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 RNU6-1188P-201ENST00000363795 107 ntBASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 SNORA3.3-201ENST00000408712 125 ntBASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 RPL31P12-201ENST00000422587 358 ntBASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 SNRPEP9-201ENST00000436794 238 ntBASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 MTCYBP6-201ENST00000441810 138 ntBASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 RNA5SP310-201ENST00000459084 116 ntBASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 AC027575.1-201ENST00000481064 460 ntBASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 RNU6-1170P-201ENST00000515974 106 ntBASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 SCARNA15.1-201ENST00000516384 125 ntBASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 SNORA31.19-201ENST00000517079 126 ntBASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 AC104576.1-201ENST00000524225 88 ntBASIC3.31□□□□□ -1.88
PTCHD4Q6ZW05 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms