Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 AC116096.1-201ENST00000566804 2314 ntBASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 AL356489.2-201ENST00000566968 3528 ntBASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNF111Q6ZNA4 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 Y_RNA.123-201ENST00000363338 102 ntBASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 Y_RNA.405-201ENST00000383979 100 ntBASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 Y_RNA.451-201ENST00000384200 100 ntBASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 Y_RNA.524-201ENST00000384564 100 ntBASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 Y_RNA.561-201ENST00000384694 100 ntBASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 MIR124-3-201ENST00000384866 87 ntBASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 MIR3065-201ENST00000390137 79 ntBASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 Y_RNA.625-201ENST00000411256 107 ntBASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 ELOCP19-201ENST00000411919 318 ntBASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 RPL27AP8-201ENST00000424277 446 ntBASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 AC091286.1-201ENST00000431233 461 ntBASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 AC004383.1-201ENST00000438135 289 ntBASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 PHBP16-201ENST00000446318 950 ntBASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 PRELID3BP1-201ENST00000457142 540 ntBASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 RPL23AP24-201ENST00000458203 385 ntBASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 AC034236.1-201ENST00000469891 373 ntBASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 AC104164.2-201ENST00000496953 495 ntBASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 AL359273.1-201ENST00000510918 627 ntBASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 RNU6-182P-201ENST00000516970 105 ntBASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 AC109479.2-201ENST00000517842 174 ntBASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 AC091144.1-201ENST00000519573 138 ntBASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 DEFB108E-201ENST00000524692 240 ntBASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 AC022080.3-201ENST00000544433 482 ntBASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 AC137590.2-201ENST00000619709 240 ntBASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 MIR7641-1-201ENST00000627518 61 ntBASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 U6.92-201ENST00000636464 89 ntBASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 AC139713.2-214ENST00000642059 1811 ntBASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RNF111Q6ZNA4 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 AL391987.6-201ENST00000305671 199 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 Y_RNA.54-201ENST00000362766 105 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 snoU2_19.2-201ENST00000363024 80 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 RNU1-32P-201ENST00000363937 159 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 RNU6-335P-201ENST00000364563 113 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 U3.13-201ENST00000364804 214 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 RNU1-89P-201ENST00000384592 164 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 MIR34A-201ENST00000385130 110 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 MIR708-201ENST00000390708 88 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 SNORA3C-201ENST00000408792 125 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 C4BPAP2-201ENST00000428434 478 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 AL358472.1-201ENST00000431295 329 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 RPL23AP22-201ENST00000437556 453 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 PIGFP3-201ENST00000441918 722 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 AL513124.1-201ENST00000450410 614 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 RN7SKP210-201ENST00000459176 261 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 snoU109.2-201ENST00000459316 135 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 RPS29P27-201ENST00000463711 170 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 AC087190.1-201ENST00000484462 480 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 AC107032.1-201ENST00000485945 480 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 RN7SL810P-201ENST00000493031 276 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 AC093840.1-201ENST00000511599 336 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 RNU6-377P-201ENST00000515965 102 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 RNU6-572P-201ENST00000516724 80 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 Y_RNA.713-201ENST00000517013 96 ntBASIC4.1□□□□□ -1.75
RNF111Q6ZNA4 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms