Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 Y_RNA.105-201ENST00000363182 111 ntBASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 RNU6-1329P-201ENST00000365664 107 ntBASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 RNU6-338P-201ENST00000383888 105 ntBASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 RNU6-174P-201ENST00000410406 106 ntBASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 RNU4-65P-201ENST00000410473 140 ntBASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 AC099677.1-201ENST00000420575 175 ntBASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 AC083863.1-201ENST00000438811 231 ntBASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 AL162389.1-201ENST00000449233 177 ntBASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 AC234775.1-201ENST00000454247 670 ntBASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 AP000926.1-201ENST00000479573 241 ntBASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 SNORA81.3-201ENST00000517283 198 ntBASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 AC103783.1-201ENST00000520506 373 ntBASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 AC104576.1-201ENST00000524225 88 ntBASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 AC009779.6-201ENST00000603972 165 ntBASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 AC010900.2-201ENST00000604508 210 ntBASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 AC007619.2-201ENST00000605743 379 ntBASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 MIR7975-201ENST00000619350 68 ntBASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 AC091903.1-201ENST00000624322 454 ntBASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 U6.104-201ENST00000637979 90 ntBASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CNKSR3Q6P9H4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
CNKSR3Q6P9H4 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 AC004925.1-201ENST00000624256 2706 ntBASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 Y_RNA.20-201ENST00000362479 113 ntBASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 RNA5SP235-201ENST00000365411 114 ntBASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 RNU6-45P-201ENST00000384471 107 ntBASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 RNU6-14P-201ENST00000384630 106 ntBASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 SNORA3C-201ENST00000408792 125 ntBASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 RN7SKP177-201ENST00000410567 355 ntBASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 MTCO3P19-201ENST00000415864 321 ntBASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 AL121871.1-201ENST00000443413 436 ntBASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 LINC01399-202ENST00000458450 244 ntBASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 RNU7-138P-201ENST00000459479 64 ntBASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 RPL7P5-201ENST00000471472 736 ntBASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 RNA5SP164-201ENST00000516533 110 ntBASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 SNORA40.15-201ENST00000516884 107 ntBASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 HMGN1P28-201ENST00000521340 364 ntBASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 AP003733.2-201ENST00000529409 171 ntBASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 CBX3P8-201ENST00000532412 525 ntBASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 MIR3910-1-201ENST00000580936 111 ntBASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 MIR3922-201ENST00000585192 84 ntBASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 AL159153.1-201ENST00000619688 317 ntBASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 AC092435.4-201ENST00000623012 4159 ntBASIC4.21□□□□□ -1.74
CNKSR3Q6P9H4 RNA5SP167-201ENST00000365461 116 ntBASIC4.2□□□□□ -1.74
CNKSR3Q6P9H4 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.2□□□□□ -1.74
CNKSR3Q6P9H4 RNU6-121P-201ENST00000410525 99 ntBASIC4.2□□□□□ -1.74
CNKSR3Q6P9H4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.2□□□□□ -1.74
CNKSR3Q6P9H4 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.2□□□□□ -1.74
CNKSR3Q6P9H4 AL159987.2-201ENST00000432754 307 ntBASIC4.2□□□□□ -1.74
CNKSR3Q6P9H4 PCMTD1P1-201ENST00000455560 355 ntBASIC4.2□□□□□ -1.74
CNKSR3Q6P9H4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.2□□□□□ -1.74
CNKSR3Q6P9H4 RNU7-169P-201ENST00000459456 61 ntBASIC4.2□□□□□ -1.74
CNKSR3Q6P9H4 TRBVB-201ENST00000477100 408 ntBASIC4.2□□□□□ -1.74
CNKSR3Q6P9H4 AC018437.1-201ENST00000492214 406 ntBASIC4.2□□□□□ -1.74
CNKSR3Q6P9H4 AC078817.1-201ENST00000492623 435 ntBASIC4.2□□□□□ -1.74
CNKSR3Q6P9H4 ERHP1-201ENST00000523006 310 ntBASIC4.2□□□□□ -1.74
CNKSR3Q6P9H4 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CNKSR3Q6P9H4 AC100770.1-201ENST00000532310 322 ntBASIC4.2□□□□□ -1.74
CNKSR3Q6P9H4 AC130289.1-201ENST00000577321 73 ntBASIC4.2□□□□□ -1.74
CNKSR3Q6P9H4 MIR5195-201ENST00000583555 115 ntBASIC4.2□□□□□ -1.74
CNKSR3Q6P9H4 AC067852.3-201ENST00000589177 561 ntBASIC4.2□□□□□ -1.74
CNKSR3Q6P9H4 SNORD91B-202ENST00000608459 222 ntBASIC4.2□□□□□ -1.74
CNKSR3Q6P9H4 AC130454.1-201ENST00000622948 401 ntBASIC4.2□□□□□ -1.74
CNKSR3Q6P9H4 MARK2P15-201ENST00000432204 2186 ntBASIC4.2□□□□□ -1.74
CNKSR3Q6P9H4 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
CNKSR3Q6P9H4 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CNKSR3Q6P9H4 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
CNKSR3Q6P9H4 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms