Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC018618.2-201ENST00000604770 446 ntBASIC0.11□□□□□ -2.39
VPS13DQ5THJ4 RNU6-348P-201ENST00000384386 107 ntBASIC0.11□□□□□ -2.39
VPS13DQ5THJ4 RPL7L1P10-201ENST00000427790 463 ntBASIC0.11□□□□□ -2.39
VPS13DQ5THJ4 SNRPGP6-201ENST00000451124 220 ntBASIC0.11□□□□□ -2.39
VPS13DQ5THJ4 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.11□□□□□ -2.39
VPS13DQ5THJ4 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.11□□□□□ -2.39
VPS13DQ5THJ4 AL359212.1-201ENST00000556608 614 ntBASIC0.11□□□□□ -2.39
VPS13DQ5THJ4 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.11□□□□□ -2.39
VPS13DQ5THJ4 MIR8065-201ENST00000620577 100 ntBASIC0.11□□□□□ -2.39
VPS13DQ5THJ4 MIR101-1-201ENST00000362265 75 ntBASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 RNU4-7P-201ENST00000364758 141 ntBASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 MT-TQ-201ENST00000387372 72 ntBASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 AL359704.1-201ENST00000411586 781 ntBASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 AC009310.1-201ENST00000414414 451 ntBASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 RSU1P2-202ENST00000437884 485 ntBASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 MTND5P14-201ENST00000441481 1267 ntBASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 BX248409.1-201ENST00000455497 255 ntBASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 AC005668.1-201ENST00000571142 476 ntBASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 VN1R82P-201ENST00000601481 356 ntBASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 AL138478.1-201ENST00000612252 832 ntBASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 MTCO3P4-201ENST00000419236 787 ntBASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 AC004492.1-201ENST00000607036 742 ntBASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 RNU4-73P-201ENST00000363164 141 ntBASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 U3.9-201ENST00000363823 204 ntBASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 SNORA25-201ENST00000384384 134 ntBASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 RNA5SP105-201ENST00000391123 113 ntBASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 RNU2-64P-201ENST00000411315 191 ntBASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 AP001893.2-201ENST00000526949 202 ntBASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 AL138726.1-201ENST00000614873 333 ntBASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 RNU2-63P-201ENST00000410792 194 ntBASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 AL356320.2-201ENST00000417263 507 ntBASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 AL645638.1-201ENST00000440519 361 ntBASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 MTND6P13-201ENST00000443510 523 ntBASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 MTND4LP3-201ENST00000468320 276 ntBASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 AC134050.1-201ENST00000495088 933 ntBASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 HMGB1P35-201ENST00000503360 598 ntBASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 MTATP6P22-201ENST00000507369 598 ntBASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 MIR892C-201ENST00000516410 77 ntBASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 HSPE1P7-201ENST00000604681 321 ntBASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 AC006963.1-201ENST00000624003 1052 ntBASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC0.1□□□□□ -2.39
VPS13DQ5THJ4 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.39
VPS13DQ5THJ4 Y_RNA.457-201ENST00000384237 111 ntBASIC0.09□□□□□ -2.39
VPS13DQ5THJ4 U3.29-201ENST00000391296 212 ntBASIC0.09□□□□□ -2.39
VPS13DQ5THJ4 AC092047.1-201ENST00000424997 240 ntBASIC0.09□□□□□ -2.39
VPS13DQ5THJ4 RPS15AP27-201ENST00000449183 343 ntBASIC0.09□□□□□ -2.39
VPS13DQ5THJ4 AL590365.1-201ENST00000450788 243 ntBASIC0.09□□□□□ -2.39
VPS13DQ5THJ4 TRBVB-201ENST00000477100 408 ntBASIC0.09□□□□□ -2.39
VPS13DQ5THJ4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC0.09□□□□□ -2.39
VPS13DQ5THJ4 AC103710.4-201ENST00000609301 899 ntBASIC0.09□□□□□ -2.39
VPS13DQ5THJ4 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.09□□□□□ -2.39
VPS13DQ5THJ4 RNU6-833P-201ENST00000363486 107 ntBASIC0.09□□□□□ -2.39
VPS13DQ5THJ4 RNU6-338P-201ENST00000383888 105 ntBASIC0.09□□□□□ -2.39
VPS13DQ5THJ4 MTCO1P3-201ENST00000429327 192 ntBASIC0.09□□□□□ -2.39
VPS13DQ5THJ4 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.09□□□□□ -2.39
VPS13DQ5THJ4 RPS26P45-201ENST00000471748 340 ntBASIC0.09□□□□□ -2.39
VPS13DQ5THJ4 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.09□□□□□ -2.39
VPS13DQ5THJ4 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.09□□□□□ -2.39
VPS13DQ5THJ4 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.09□□□□□ -2.39
VPS13DQ5THJ4 AC068620.3-201ENST00000602749 560 ntBASIC0.09□□□□□ -2.39
VPS13DQ5THJ4 AC080013.4-201ENST00000607624 649 ntBASIC0.09□□□□□ -2.39
VPS13DQ5THJ4 ZNF33BP1-201ENST00000452497 1834 ntBASIC0.09□□□□□ -2.4
VPS13DQ5THJ4 RNU1-96P-201ENST00000364163 162 ntBASIC0.09□□□□□ -2.4
VPS13DQ5THJ4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
VPS13DQ5THJ4 RNU6-514P-201ENST00000384208 107 ntBASIC0.09□□□□□ -2.4
VPS13DQ5THJ4 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC0.09□□□□□ -2.4
VPS13DQ5THJ4 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC0.09□□□□□ -2.4
VPS13DQ5THJ4 HMGB1P36-201ENST00000487709 576 ntBASIC0.09□□□□□ -2.4
VPS13DQ5THJ4 AC145146.1-201ENST00000496370 254 ntBASIC0.09□□□□□ -2.4
VPS13DQ5THJ4 AC093027.1-201ENST00000546698 429 ntBASIC0.09□□□□□ -2.4
VPS13DQ5THJ4 AL133241.1-201ENST00000556832 487 ntBASIC0.09□□□□□ -2.4
VPS13DQ5THJ4 AC016716.1-201ENST00000265882 708 ntBASIC0.08□□□□□ -2.4
VPS13DQ5THJ4 RPS3AP36-201ENST00000398190 775 ntBASIC0.08□□□□□ -2.4
VPS13DQ5THJ4 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.08□□□□□ -2.4
VPS13DQ5THJ4 AC012414.6-201ENST00000568241 401 ntBASIC0.08□□□□□ -2.4
VPS13DQ5THJ4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.08□□□□□ -2.4
VPS13DQ5THJ4 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.08□□□□□ -2.4
VPS13DQ5THJ4 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.08□□□□□ -2.4
VPS13DQ5THJ4 AC022493.2-201ENST00000506122 481 ntBASIC0.08□□□□□ -2.4
VPS13DQ5THJ4 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.08□□□□□ -2.4
VPS13DQ5THJ4 AP003122.4-201ENST00000530980 758 ntBASIC0.08□□□□□ -2.4
VPS13DQ5THJ4 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.08□□□□□ -2.4
VPS13DQ5THJ4 RNU6-110P-201ENST00000384508 104 ntBASIC0.08□□□□□ -2.4
VPS13DQ5THJ4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
VPS13DQ5THJ4 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC0.08□□□□□ -2.4
VPS13DQ5THJ4 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
VPS13DQ5THJ4 RNA5SP496-201ENST00000391240 109 ntBASIC0.08□□□□□ -2.4
VPS13DQ5THJ4 HNRNPDP2-201ENST00000406475 478 ntBASIC0.08□□□□□ -2.4
VPS13DQ5THJ4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms