Protein–RNA interactions for Protein: Q5T9S5

CCDC18, Coiled-coil domain-containing protein 18, humanhuman

Predictions only

Length 1,454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18Q5T9S5 DSTNP4-201ENST00000399472 474 ntBASIC0.75□□□□□ -2.29
CCDC18Q5T9S5 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
CCDC18Q5T9S5 RPS24P7-201ENST00000416921 246 ntBASIC0.75□□□□□ -2.29
CCDC18Q5T9S5 AC104164.3-201ENST00000467363 1258 ntBASIC0.75□□□□□ -2.29
CCDC18Q5T9S5 AC098591.2-201ENST00000510152 315 ntBASIC0.75□□□□□ -2.29
CCDC18Q5T9S5 RNU6-322P-201ENST00000516010 103 ntBASIC0.75□□□□□ -2.29
CCDC18Q5T9S5 HAUS1P3-201ENST00000523909 662 ntBASIC0.75□□□□□ -2.29
CCDC18Q5T9S5 OR8K4P-201ENST00000534608 872 ntBASIC0.75□□□□□ -2.29
CCDC18Q5T9S5 AL356432.3-201ENST00000568952 465 ntBASIC0.75□□□□□ -2.29
CCDC18Q5T9S5 AC023932.2-201ENST00000603176 175 ntBASIC0.75□□□□□ -2.29
CCDC18Q5T9S5 AC243829.6-201ENST00000612652 106 ntBASIC0.75□□□□□ -2.29
CCDC18Q5T9S5 FTH1P15-201ENST00000406984 280 ntBASIC0.74□□□□□ -2.29
CCDC18Q5T9S5 AC009310.1-201ENST00000414414 451 ntBASIC0.74□□□□□ -2.29
CCDC18Q5T9S5 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.74□□□□□ -2.29
CCDC18Q5T9S5 YWHAZP8-201ENST00000436935 731 ntBASIC0.74□□□□□ -2.29
CCDC18Q5T9S5 AC114786.4-201ENST00000508771 728 ntBASIC0.74□□□□□ -2.29
CCDC18Q5T9S5 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
CCDC18Q5T9S5 AC114797.1-201ENST00000514003 728 ntBASIC0.74□□□□□ -2.29
CCDC18Q5T9S5 LY96-202ENST00000518893 430 ntTSL 3 BASIC0.74□□□□□ -2.29
CCDC18Q5T9S5 AP003355.1-201ENST00000518956 587 ntBASIC0.74□□□□□ -2.29
CCDC18Q5T9S5 AC012669.1-201ENST00000603209 283 ntBASIC0.74□□□□□ -2.29
CCDC18Q5T9S5 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.74□□□□□ -2.29
CCDC18Q5T9S5 SSXP10-201ENST00000402595 565 ntBASIC0.73□□□□□ -2.29
CCDC18Q5T9S5 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC0.73□□□□□ -2.29
CCDC18Q5T9S5 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.73□□□□□ -2.29
CCDC18Q5T9S5 UBE2V2P3-201ENST00000433562 437 ntBASIC0.73□□□□□ -2.29
CCDC18Q5T9S5 RPL9P9-202ENST00000466501 579 ntBASIC0.73□□□□□ -2.29
CCDC18Q5T9S5 AL049714.1-201ENST00000466686 347 ntBASIC0.73□□□□□ -2.29
CCDC18Q5T9S5 AC100821.1-201ENST00000523153 2479 ntBASIC0.73□□□□□ -2.29
CCDC18Q5T9S5 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC0.73□□□□□ -2.29
CCDC18Q5T9S5 AC012676.2-201ENST00000619258 186 ntBASIC0.73□□□□□ -2.29
CCDC18Q5T9S5 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
CCDC18Q5T9S5 Y_RNA.62-201ENST00000362840 99 ntBASIC0.73□□□□□ -2.29
CCDC18Q5T9S5 AC007742.1-201ENST00000425789 329 ntBASIC0.73□□□□□ -2.29
CCDC18Q5T9S5 ELOCP26-201ENST00000436067 329 ntBASIC0.73□□□□□ -2.29
CCDC18Q5T9S5 RPL30P6-201ENST00000475925 342 ntBASIC0.73□□□□□ -2.29
CCDC18Q5T9S5 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.73□□□□□ -2.29
CCDC18Q5T9S5 AC104057.1-201ENST00000515547 497 ntBASIC0.73□□□□□ -2.29
CCDC18Q5T9S5 RNA5SP404-201ENST00000517118 132 ntBASIC0.73□□□□□ -2.29
CCDC18Q5T9S5 HMGN2P15-201ENST00000585707 270 ntBASIC0.73□□□□□ -2.29
CCDC18Q5T9S5 AL138963.2-201ENST00000605137 226 ntBASIC0.73□□□□□ -2.29
CCDC18Q5T9S5 MTND4P8-201ENST00000514997 1362 ntBASIC0.72□□□□□ -2.29
CCDC18Q5T9S5 RNU6-750P-201ENST00000390946 107 ntBASIC0.72□□□□□ -2.29
CCDC18Q5T9S5 AL606490.4-201ENST00000423117 127 ntBASIC0.72□□□□□ -2.29
CCDC18Q5T9S5 RPL36P19-201ENST00000430744 301 ntBASIC0.72□□□□□ -2.29
CCDC18Q5T9S5 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.72□□□□□ -2.29
CCDC18Q5T9S5 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.72□□□□□ -2.29
CCDC18Q5T9S5 DDX3P2-201ENST00000446138 111 ntBASIC0.72□□□□□ -2.29
CCDC18Q5T9S5 RPS20P10-201ENST00000451209 253 ntBASIC0.72□□□□□ -2.29
CCDC18Q5T9S5 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.72□□□□□ -2.29
CCDC18Q5T9S5 RNU7-40P-201ENST00000516397 64 ntBASIC0.72□□□□□ -2.29
CCDC18Q5T9S5 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.72□□□□□ -2.29
CCDC18Q5T9S5 AL355472.4-201ENST00000610233 626 ntBASIC0.72□□□□□ -2.29
CCDC18Q5T9S5 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.72□□□□□ -2.29
CCDC18Q5T9S5 HSBP1P2-201ENST00000299671 229 ntBASIC0.71□□□□□ -2.3
CCDC18Q5T9S5 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.71□□□□□ -2.3
CCDC18Q5T9S5 RNU6-452P-201ENST00000384406 107 ntBASIC0.71□□□□□ -2.3
CCDC18Q5T9S5 AL449283.1-202ENST00000418249 604 ntBASIC0.71□□□□□ -2.3
CCDC18Q5T9S5 AC083875.1-201ENST00000419509 405 ntBASIC0.71□□□□□ -2.3
CCDC18Q5T9S5 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.71□□□□□ -2.3
CCDC18Q5T9S5 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
CCDC18Q5T9S5 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0.71□□□□□ -2.3
CCDC18Q5T9S5 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC0.71□□□□□ -2.3
CCDC18Q5T9S5 AP003122.4-201ENST00000530980 758 ntBASIC0.71□□□□□ -2.3
CCDC18Q5T9S5 BX322635.1-201ENST00000605804 496 ntBASIC0.71□□□□□ -2.3
CCDC18Q5T9S5 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.71□□□□□ -2.3
CCDC18Q5T9S5 AC024595.1-201ENST00000623088 387 ntBASIC0.71□□□□□ -2.3
CCDC18Q5T9S5 AC073544.1-201ENST00000600110 1595 ntBASIC0.71□□□□□ -2.3
CCDC18Q5T9S5 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
CCDC18Q5T9S5 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
CCDC18Q5T9S5 RNU6-222P-201ENST00000362438 107 ntBASIC0.7□□□□□ -2.3
CCDC18Q5T9S5 Y_RNA.280-201ENST00000364765 112 ntBASIC0.7□□□□□ -2.3
CCDC18Q5T9S5 RNU6-1226P-201ENST00000384317 107 ntBASIC0.7□□□□□ -2.3
CCDC18Q5T9S5 MIR518D-201ENST00000385014 87 ntBASIC0.7□□□□□ -2.3
CCDC18Q5T9S5 CST2P1-201ENST00000425770 87 ntBASIC0.7□□□□□ -2.3
CCDC18Q5T9S5 RPL31P35-201ENST00000431058 377 ntBASIC0.7□□□□□ -2.3
CCDC18Q5T9S5 AL135790.2-201ENST00000437701 267 ntBASIC0.7□□□□□ -2.3
CCDC18Q5T9S5 RSU1P2-202ENST00000437884 485 ntBASIC0.7□□□□□ -2.3
CCDC18Q5T9S5 MRPS17P3-201ENST00000465453 385 ntBASIC0.7□□□□□ -2.3
CCDC18Q5T9S5 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.7□□□□□ -2.3
CCDC18Q5T9S5 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.7□□□□□ -2.3
CCDC18Q5T9S5 CYP2C61P-201ENST00000604072 290 ntBASIC0.7□□□□□ -2.3
CCDC18Q5T9S5 MIR6086-201ENST00000638065 55 ntBASIC0.7□□□□□ -2.3
CCDC18Q5T9S5 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
CCDC18Q5T9S5 RNU2-63P-201ENST00000410792 194 ntBASIC0.69□□□□□ -2.3
CCDC18Q5T9S5 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.69□□□□□ -2.3
CCDC18Q5T9S5 AC114737.2-201ENST00000421583 173 ntBASIC0.69□□□□□ -2.3
CCDC18Q5T9S5 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.69□□□□□ -2.3
CCDC18Q5T9S5 ZNF736P6Y-201ENST00000447526 1213 ntBASIC0.69□□□□□ -2.3
CCDC18Q5T9S5 AL133373.1-201ENST00000497098 94 ntBASIC0.69□□□□□ -2.3
CCDC18Q5T9S5 AC138853.1-201ENST00000503549 823 ntBASIC0.69□□□□□ -2.3
CCDC18Q5T9S5 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.69□□□□□ -2.3
CCDC18Q5T9S5 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CCDC18Q5T9S5 DEFB108D-201ENST00000527787 222 ntBASIC0.69□□□□□ -2.3
CCDC18Q5T9S5 AC136932.1-201ENST00000574771 208 ntBASIC0.69□□□□□ -2.3
CCDC18Q5T9S5 MIR3921-201ENST00000577308 85 ntBASIC0.69□□□□□ -2.3
CCDC18Q5T9S5 MIR4653-201ENST00000585107 83 ntBASIC0.69□□□□□ -2.3
CCDC18Q5T9S5 AP000403.1-201ENST00000603349 851 ntBASIC0.69□□□□□ -2.3
CCDC18Q5T9S5 AC025588.3-201ENST00000604182 274 ntBASIC0.69□□□□□ -2.3
CCDC18Q5T9S5 AC005021.1-201ENST00000608730 355 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms