Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 MIR148B-201ENST00000362252 99 ntBASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 RNA5SP124-201ENST00000362739 110 ntBASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 Y_RNA.160-201ENST00000363677 92 ntBASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 RNU6-266P-201ENST00000364225 107 ntBASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 AL359837.1-201ENST00000381357 287 ntBASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 RNY3P14-201ENST00000384309 102 ntBASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 AC138393.2-201ENST00000414742 246 ntBASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 AL645937.1-202ENST00000421799 937 ntBASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 MTND4LP11-201ENST00000422184 280 ntBASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 BPY2DP-201ENST00000422208 265 ntBASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 AL627311.1-201ENST00000431514 115 ntBASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 AL353705.1-201ENST00000433468 480 ntBASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 RNU7-66P-201ENST00000459469 62 ntBASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 AP000852.1-201ENST00000472460 573 ntBASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 RN7SL283P-201ENST00000489055 303 ntBASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 AC114786.4-201ENST00000508771 728 ntBASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 RN7SKP18-201ENST00000516005 275 ntBASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 RNU6-1314P-201ENST00000517139 104 ntBASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 MIR4782-201ENST00000577987 79 ntBASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 AC004832.5-201ENST00000608677 401 ntBASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 AC009033.1-201ENST00000624279 431 ntBASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.15□□□□□ -1.91
RUNDC3AQ59EK9 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
RUNDC3AQ59EK9 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
RUNDC3AQ59EK9 Y_RNA.373-201ENST00000365600 103 ntBASIC3.14□□□□□ -1.91
RUNDC3AQ59EK9 MIR10A-201ENST00000385043 110 ntBASIC3.14□□□□□ -1.91
RUNDC3AQ59EK9 AL356057.2-201ENST00000403318 432 ntBASIC3.14□□□□□ -1.91
RUNDC3AQ59EK9 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.14□□□□□ -1.91
RUNDC3AQ59EK9 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.14□□□□□ -1.91
RUNDC3AQ59EK9 AC005300.1-201ENST00000428401 373 ntBASIC3.14□□□□□ -1.91
RUNDC3AQ59EK9 HMGB1P9-201ENST00000429856 646 ntBASIC3.14□□□□□ -1.91
RUNDC3AQ59EK9 CST9LP2-201ENST00000437612 320 ntBASIC3.14□□□□□ -1.91
RUNDC3AQ59EK9 AC098831.1-201ENST00000440661 216 ntBASIC3.14□□□□□ -1.91
RUNDC3AQ59EK9 NOTCH2P1-201ENST00000443481 624 ntBASIC3.14□□□□□ -1.91
RUNDC3AQ59EK9 RNU7-23P-201ENST00000459465 62 ntBASIC3.14□□□□□ -1.91
RUNDC3AQ59EK9 AC117503.1-201ENST00000472241 394 ntBASIC3.14□□□□□ -1.91
RUNDC3AQ59EK9 FAM206BP-201ENST00000510179 541 ntBASIC3.14□□□□□ -1.91
RUNDC3AQ59EK9 AC025465.4-201ENST00000513422 638 ntBASIC3.14□□□□□ -1.91
RUNDC3AQ59EK9 SNORA14.1-201ENST00000516113 141 ntBASIC3.14□□□□□ -1.91
RUNDC3AQ59EK9 SNORD59.2-201ENST00000516873 68 ntBASIC3.14□□□□□ -1.91
RUNDC3AQ59EK9 SNORA20.3-201ENST00000516880 132 ntBASIC3.14□□□□□ -1.91
RUNDC3AQ59EK9 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RUNDC3AQ59EK9 TRMT10BP1-201ENST00000519377 943 ntBASIC3.14□□□□□ -1.91
RUNDC3AQ59EK9 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.14□□□□□ -1.91
RUNDC3AQ59EK9 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.14□□□□□ -1.91
RUNDC3AQ59EK9 AC005476.1-201ENST00000554427 397 ntBASIC3.14□□□□□ -1.91
RUNDC3AQ59EK9 MIR548S-201ENST00000581352 82 ntBASIC3.14□□□□□ -1.91
RUNDC3AQ59EK9 uc_338.1-201ENST00000612113 180 ntBASIC3.14□□□□□ -1.91
RUNDC3AQ59EK9 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.14□□□□□ -1.91
RUNDC3AQ59EK9 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.14□□□□□ -1.91
RUNDC3AQ59EK9 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.14□□□□□ -1.91
RUNDC3AQ59EK9 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
RUNDC3AQ59EK9 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
RUNDC3AQ59EK9 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.13□□□□□ -1.91
RUNDC3AQ59EK9 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RUNDC3AQ59EK9 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.13□□□□□ -1.91
RUNDC3AQ59EK9 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
RUNDC3AQ59EK9 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
RUNDC3AQ59EK9 Y_RNA.480-201ENST00000384364 102 ntBASIC3.13□□□□□ -1.91
RUNDC3AQ59EK9 MIR518D-201ENST00000385014 87 ntBASIC3.13□□□□□ -1.91
RUNDC3AQ59EK9 SNORD17-201ENST00000390930 237 ntBASIC3.13□□□□□ -1.91
RUNDC3AQ59EK9 RPL5P18-201ENST00000406671 891 ntBASIC3.13□□□□□ -1.91
RUNDC3AQ59EK9 RNA5SP44-201ENST00000410446 133 ntBASIC3.13□□□□□ -1.91
RUNDC3AQ59EK9 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.13□□□□□ -1.91
RUNDC3AQ59EK9 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.13□□□□□ -1.91
RUNDC3AQ59EK9 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.13□□□□□ -1.91
RUNDC3AQ59EK9 AL513185.2-201ENST00000425543 193 ntBASIC3.13□□□□□ -1.91
RUNDC3AQ59EK9 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.13□□□□□ -1.91
RUNDC3AQ59EK9 AC115115.1-201ENST00000449927 248 ntBASIC3.13□□□□□ -1.91
RUNDC3AQ59EK9 AC007547.1-201ENST00000462177 490 ntBASIC3.13□□□□□ -1.91
RUNDC3AQ59EK9 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.13□□□□□ -1.91
RUNDC3AQ59EK9 RNA5SP217-201ENST00000515959 91 ntBASIC3.13□□□□□ -1.91
RUNDC3AQ59EK9 SNORA31.21-201ENST00000517180 77 ntBASIC3.13□□□□□ -1.91
RUNDC3AQ59EK9 IGKV2-26-201ENST00000518305 343 ntBASIC3.13□□□□□ -1.91
RUNDC3AQ59EK9 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.13□□□□□ -1.91
RUNDC3AQ59EK9 Z82243.1-201ENST00000609432 473 ntBASIC3.13□□□□□ -1.91
RUNDC3AQ59EK9 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.13□□□□□ -1.91
RUNDC3AQ59EK9 AC110491.1-201ENST00000562191 2010 ntBASIC3.13□□□□□ -1.91
RUNDC3AQ59EK9 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RUNDC3AQ59EK9 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RUNDC3AQ59EK9 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
RUNDC3AQ59EK9 RNU1-70P-201ENST00000362618 164 ntBASIC3.12□□□□□ -1.91
RUNDC3AQ59EK9 RNA5SP119-201ENST00000362715 117 ntBASIC3.12□□□□□ -1.91
RUNDC3AQ59EK9 Y_RNA.279-201ENST00000364763 95 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 361.5 ms