Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 SNORA16.2-201ENST00000390991 127 ntBASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 AL592114.1-201ENST00000403842 483 ntBASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 NCOR1P3-201ENST00000420479 303 ntBASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 AL669831.1-202ENST00000428504 417 ntBASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 GTF2IP13-201ENST00000438487 386 ntBASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 CECR9-201ENST00000453421 199 ntBASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 RPL23AP11-201ENST00000475260 469 ntBASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 AL135752.1-201ENST00000479477 471 ntBASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 AC083904.1-201ENST00000487828 231 ntBASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 AL160314.1-201ENST00000490836 438 ntBASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 FAM206BP-201ENST00000510179 541 ntBASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 RNU6-1045P-201ENST00000516321 107 ntBASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 TRAV28-201ENST00000557548 323 ntBASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 FRG2DP-202ENST00000566967 323 ntBASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 MIR4425-201ENST00000580572 84 ntBASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 CTHRC1P1-201ENST00000605383 469 ntBASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 BRDTP1-201ENST00000605735 677 ntBASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 AC107294.1-201ENST00000609524 467 ntBASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 AC009570.1-201ENST00000609599 745 ntBASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.7□□□□□ -1.82
SLC44A4Q53GD3 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SLC44A4Q53GD3 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
SLC44A4Q53GD3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.69□□□□□ -1.82
SLC44A4Q53GD3 MTND4P27-201ENST00000450813 1354 ntBASIC3.69□□□□□ -1.82
SLC44A4Q53GD3 MIR369-201ENST00000362155 70 ntBASIC3.69□□□□□ -1.82
SLC44A4Q53GD3 Y_RNA.301-201ENST00000364990 103 ntBASIC3.69□□□□□ -1.82
SLC44A4Q53GD3 RNU6-474P-201ENST00000384243 107 ntBASIC3.69□□□□□ -1.82
SLC44A4Q53GD3 RNU6-1304P-201ENST00000411374 106 ntBASIC3.69□□□□□ -1.82
SLC44A4Q53GD3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.69□□□□□ -1.82
SLC44A4Q53GD3 AC063979.1-201ENST00000415539 377 ntBASIC3.69□□□□□ -1.82
SLC44A4Q53GD3 GPM6BP2-201ENST00000432046 144 ntBASIC3.69□□□□□ -1.82
SLC44A4Q53GD3 PRPS1P1-201ENST00000445305 876 ntBASIC3.69□□□□□ -1.82
SLC44A4Q53GD3 GPM6BP1-201ENST00000446387 144 ntBASIC3.69□□□□□ -1.82
SLC44A4Q53GD3 AC012181.1-201ENST00000479895 423 ntBASIC3.69□□□□□ -1.82
SLC44A4Q53GD3 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.69□□□□□ -1.82
SLC44A4Q53GD3 TBCAP3-201ENST00000512475 312 ntBASIC3.69□□□□□ -1.82
SLC44A4Q53GD3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.69□□□□□ -1.82
SLC44A4Q53GD3 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.69□□□□□ -1.82
SLC44A4Q53GD3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.69□□□□□ -1.82
SLC44A4Q53GD3 MIR3171-201ENST00000584270 74 ntBASIC3.69□□□□□ -1.82
SLC44A4Q53GD3 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.69□□□□□ -1.82
SLC44A4Q53GD3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.69□□□□□ -1.82
SLC44A4Q53GD3 POLR3GP2-201ENST00000588366 668 ntBASIC3.69□□□□□ -1.82
SLC44A4Q53GD3 AC012493.2-201ENST00000595083 291 ntBASIC3.69□□□□□ -1.82
SLC44A4Q53GD3 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.69□□□□□ -1.82
SLC44A4Q53GD3 uc_338.15-201ENST00000615470 191 ntBASIC3.69□□□□□ -1.82
SLC44A4Q53GD3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SLC44A4Q53GD3 MTND4LP32-201ENST00000636111 270 ntBASIC3.69□□□□□ -1.82
SLC44A4Q53GD3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SLC44A4Q53GD3 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SLC44A4Q53GD3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SLC44A4Q53GD3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SLC44A4Q53GD3 CEP170P1-201ENST00000502249 4587 ntBASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 Y_RNA.167-201ENST00000363735 109 ntBASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 RNU6-43P-201ENST00000384302 107 ntBASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 MIR578-201ENST00000384828 96 ntBASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 MIR606-201ENST00000384851 96 ntBASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 SNORA48.5-201ENST00000391143 135 ntBASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 RPS4XP7-201ENST00000406274 780 ntBASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 RNU4-14P-201ENST00000410858 122 ntBASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 BX682237.1-201ENST00000415016 335 ntBASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 AC017079.2-201ENST00000416102 485 ntBASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 DBIP2-201ENST00000419076 262 ntBASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 AL512844.2-201ENST00000433990 593 ntBASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 FABP5P15-201ENST00000453566 214 ntBASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 RPL21P41-201ENST00000459863 264 ntBASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 TRBV1-201ENST00000476502 284 ntBASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 RNU6-273P-201ENST00000516937 96 ntBASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 AC090136.1-201ENST00000520009 240 ntBASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 AC092747.3-201ENST00000603769 301 ntBASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 ATP1B3P1-201ENST00000605365 821 ntBASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 AC116312.1-201ENST00000606841 314 ntBASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 AC099778.2-201ENST00000610904 211 ntBASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 XIST_intron.1-201ENST00000619444 68 ntBASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 AC090971.5-201ENST00000621102 293 ntBASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 AL359757.2-201ENST00000624309 274 ntBASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 AC134503.1-201ENST00000633048 54 ntBASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
SLC44A4Q53GD3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 155.2 ms