Protein–RNA interactions for Protein: Q504U0

C4orf46, Renal cancer differentiation gene 1 protein, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46Q504U0 RPS3AP41-201ENST00000462701 778 ntBASIC3.42□□□□□ -1.86
C4orf46Q504U0 AC092324.1-201ENST00000468671 324 ntBASIC3.42□□□□□ -1.86
C4orf46Q504U0 RN7SL738P-201ENST00000470264 297 ntBASIC3.42□□□□□ -1.86
C4orf46Q504U0 RPS27P27-201ENST00000498779 255 ntBASIC3.42□□□□□ -1.86
C4orf46Q504U0 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.42□□□□□ -1.86
C4orf46Q504U0 RNA5SP112-201ENST00000515937 99 ntBASIC3.42□□□□□ -1.86
C4orf46Q504U0 RN7SKP21-201ENST00000516503 220 ntBASIC3.42□□□□□ -1.86
C4orf46Q504U0 RNA5SP454-201ENST00000517231 127 ntBASIC3.42□□□□□ -1.86
C4orf46Q504U0 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.42□□□□□ -1.86
C4orf46Q504U0 AP005639.2-201ENST00000527592 928 ntBASIC3.42□□□□□ -1.86
C4orf46Q504U0 AP003072.1-201ENST00000531740 145 ntBASIC3.42□□□□□ -1.86
C4orf46Q504U0 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.42□□□□□ -1.86
C4orf46Q504U0 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.42□□□□□ -1.86
C4orf46Q504U0 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.42□□□□□ -1.86
C4orf46Q504U0 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.42□□□□□ -1.86
C4orf46Q504U0 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.42□□□□□ -1.86
C4orf46Q504U0 AL645944.1-201ENST00000603857 493 ntBASIC3.42□□□□□ -1.86
C4orf46Q504U0 FAM27D1-201ENST00000612308 341 ntBASIC3.42□□□□□ -1.86
C4orf46Q504U0 FAM157A-202ENST00000615155 405 ntBASIC3.42□□□□□ -1.86
C4orf46Q504U0 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.42□□□□□ -1.86
C4orf46Q504U0 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.42□□□□□ -1.86
C4orf46Q504U0 AL359854.1-201ENST00000614203 1594 ntBASIC3.42□□□□□ -1.86
C4orf46Q504U0 AC121333.1-201ENST00000567488 2709 ntBASIC3.42□□□□□ -1.86
C4orf46Q504U0 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.41□□□□□ -1.86
C4orf46Q504U0 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
C4orf46Q504U0 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
C4orf46Q504U0 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
C4orf46Q504U0 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.41□□□□□ -1.86
C4orf46Q504U0 AL158163.1-201ENST00000603915 1649 ntBASIC3.41□□□□□ -1.86
C4orf46Q504U0 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
C4orf46Q504U0 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.41□□□□□ -1.86
C4orf46Q504U0 SNORD35B-201ENST00000363660 87 ntBASIC3.41□□□□□ -1.86
C4orf46Q504U0 RNU6-82P-201ENST00000363970 107 ntBASIC3.41□□□□□ -1.86
C4orf46Q504U0 Y_RNA.216-201ENST00000364205 93 ntBASIC3.41□□□□□ -1.86
C4orf46Q504U0 RNU6-371P-201ENST00000364283 108 ntBASIC3.41□□□□□ -1.86
C4orf46Q504U0 RNU6-898P-201ENST00000365627 104 ntBASIC3.41□□□□□ -1.86
C4orf46Q504U0 MIR34A-201ENST00000385130 110 ntBASIC3.41□□□□□ -1.86
C4orf46Q504U0 RNA5SP397-201ENST00000391323 118 ntBASIC3.41□□□□□ -1.86
C4orf46Q504U0 MTCYBP4-201ENST00000401524 249 ntBASIC3.41□□□□□ -1.86
C4orf46Q504U0 MIR548K-201ENST00000408406 116 ntBASIC3.41□□□□□ -1.86
C4orf46Q504U0 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.41□□□□□ -1.86
C4orf46Q504U0 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.41□□□□□ -1.86
C4orf46Q504U0 RPL21P2-201ENST00000440049 481 ntBASIC3.41□□□□□ -1.86
C4orf46Q504U0 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.41□□□□□ -1.86
C4orf46Q504U0 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.41□□□□□ -1.86
C4orf46Q504U0 AC107399.1-201ENST00000451226 265 ntBASIC3.41□□□□□ -1.86
C4orf46Q504U0 RNU7-167P-201ENST00000459160 62 ntBASIC3.41□□□□□ -1.86
C4orf46Q504U0 AC027575.1-201ENST00000481064 460 ntBASIC3.41□□□□□ -1.86
C4orf46Q504U0 RN7SL271P-201ENST00000487601 295 ntBASIC3.41□□□□□ -1.86
C4orf46Q504U0 RPL29P14-201ENST00000495837 428 ntBASIC3.41□□□□□ -1.86
C4orf46Q504U0 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC3.41□□□□□ -1.86
C4orf46Q504U0 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
C4orf46Q504U0 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.41□□□□□ -1.86
C4orf46Q504U0 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.41□□□□□ -1.86
C4orf46Q504U0 RNU7-143P-201ENST00000516781 65 ntBASIC3.41□□□□□ -1.86
C4orf46Q504U0 AC008011.1-201ENST00000545989 227 ntBASIC3.41□□□□□ -1.86
C4orf46Q504U0 AC025423.5-201ENST00000550230 219 ntBASIC3.41□□□□□ -1.86
C4orf46Q504U0 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC3.41□□□□□ -1.86
C4orf46Q504U0 CYCSP39-201ENST00000565821 309 ntBASIC3.41□□□□□ -1.86
C4orf46Q504U0 AC090616.3-201ENST00000582184 217 ntBASIC3.41□□□□□ -1.86
C4orf46Q504U0 MIR3199-1-201ENST00000582434 88 ntBASIC3.41□□□□□ -1.86
C4orf46Q504U0 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.41□□□□□ -1.86
C4orf46Q504U0 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.41□□□□□ -1.86
C4orf46Q504U0 MIR6862-1-201ENST00000613016 70 ntBASIC3.41□□□□□ -1.86
C4orf46Q504U0 MIR6862-2-201ENST00000614755 70 ntBASIC3.41□□□□□ -1.86
C4orf46Q504U0 AC126177.8-201ENST00000618339 1015 ntBASIC3.41□□□□□ -1.86
C4orf46Q504U0 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.41□□□□□ -1.86
C4orf46Q504U0 MIR7153-201ENST00000637758 57 ntBASIC3.41□□□□□ -1.86
C4orf46Q504U0 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
C4orf46Q504U0 MTND5P27-201ENST00000428871 1720 ntBASIC3.41□□□□□ -1.86
C4orf46Q504U0 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.41□□□□□ -1.86
C4orf46Q504U0 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.41□□□□□ -1.86
C4orf46Q504U0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.86
C4orf46Q504U0 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
C4orf46Q504U0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.4□□□□□ -1.86
C4orf46Q504U0 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
C4orf46Q504U0 MTND4P27-201ENST00000450813 1354 ntBASIC3.4□□□□□ -1.86
C4orf46Q504U0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
C4orf46Q504U0 MIR331-201ENST00000362302 94 ntBASIC3.4□□□□□ -1.87
C4orf46Q504U0 RNU6-486P-201ENST00000363116 107 ntBASIC3.4□□□□□ -1.87
C4orf46Q504U0 RNA5SP507-201ENST00000363603 121 ntBASIC3.4□□□□□ -1.87
C4orf46Q504U0 SNORA26.7-201ENST00000391288 122 ntBASIC3.4□□□□□ -1.87
C4orf46Q504U0 RPL37P10-201ENST00000412884 288 ntBASIC3.4□□□□□ -1.87
C4orf46Q504U0 AC074085.1-201ENST00000413598 418 ntBASIC3.4□□□□□ -1.87
C4orf46Q504U0 RPLP0P7-201ENST00000416050 667 ntBASIC3.4□□□□□ -1.87
C4orf46Q504U0 FABP5P14-201ENST00000437273 393 ntBASIC3.4□□□□□ -1.87
C4orf46Q504U0 AC125238.1-201ENST00000448842 249 ntBASIC3.4□□□□□ -1.87
C4orf46Q504U0 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.4□□□□□ -1.87
C4orf46Q504U0 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.4□□□□□ -1.87
C4orf46Q504U0 HMGN1P10-201ENST00000474557 553 ntBASIC3.4□□□□□ -1.87
C4orf46Q504U0 MTND5P5-201ENST00000503764 376 ntBASIC3.4□□□□□ -1.87
C4orf46Q504U0 AC023141.11-201ENST00000508864 202 ntBASIC3.4□□□□□ -1.87
C4orf46Q504U0 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.4□□□□□ -1.87
C4orf46Q504U0 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.4□□□□□ -1.87
C4orf46Q504U0 SNORA14.1-201ENST00000516113 141 ntBASIC3.4□□□□□ -1.87
C4orf46Q504U0 RNU6-581P-201ENST00000516214 105 ntBASIC3.4□□□□□ -1.87
C4orf46Q504U0 Y_RNA.718-201ENST00000517110 102 ntBASIC3.4□□□□□ -1.87
C4orf46Q504U0 APOOP3-201ENST00000536787 586 ntBASIC3.4□□□□□ -1.87
C4orf46Q504U0 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
C4orf46Q504U0 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms