Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC093908.1-201ENST00000623125 8092 ntBASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.26□□□□□ -1.73
CCDC144BQ3MJ40 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC144BQ3MJ40 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CCDC144BQ3MJ40 Y_RNA.263-201ENST00000364659 114 ntBASIC4.25□□□□□ -1.73
CCDC144BQ3MJ40 RNU6-283P-201ENST00000364788 107 ntBASIC4.25□□□□□ -1.73
CCDC144BQ3MJ40 RNVU1-14-201ENST00000384770 164 ntBASIC4.25□□□□□ -1.73
CCDC144BQ3MJ40 RNU6-1106P-201ENST00000390845 107 ntBASIC4.25□□□□□ -1.73
CCDC144BQ3MJ40 U3.37-201ENST00000408528 213 ntBASIC4.25□□□□□ -1.73
CCDC144BQ3MJ40 PDCL2P1-201ENST00000419302 352 ntBASIC4.25□□□□□ -1.73
CCDC144BQ3MJ40 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC144BQ3MJ40 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CCDC144BQ3MJ40 CYCSP35-201ENST00000451978 304 ntBASIC4.25□□□□□ -1.73
CCDC144BQ3MJ40 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC144BQ3MJ40 SNORA31.21-201ENST00000517180 77 ntBASIC4.25□□□□□ -1.73
CCDC144BQ3MJ40 AC109479.2-201ENST00000517842 174 ntBASIC4.25□□□□□ -1.73
CCDC144BQ3MJ40 AC026464.5-201ENST00000562497 722 ntBASIC4.25□□□□□ -1.73
CCDC144BQ3MJ40 AC100830.2-201ENST00000581636 240 ntBASIC4.25□□□□□ -1.73
CCDC144BQ3MJ40 MIR6134-201ENST00000617606 109 ntBASIC4.25□□□□□ -1.73
CCDC144BQ3MJ40 Z69720.2-201ENST00000624755 279 ntBASIC4.25□□□□□ -1.73
CCDC144BQ3MJ40 MIR3199-2-201ENST00000636243 86 ntBASIC4.25□□□□□ -1.73
CCDC144BQ3MJ40 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC144BQ3MJ40 MFSD8-236ENST00000641509 4050 ntBASIC4.25□□□□□ -1.73
CCDC144BQ3MJ40 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC144BQ3MJ40 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CCDC144BQ3MJ40 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC144BQ3MJ40 MTND5P1-201ENST00000445440 1375 ntBASIC4.25□□□□□ -1.73
CCDC144BQ3MJ40 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC144BQ3MJ40 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC144BQ3MJ40 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC144BQ3MJ40 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC144BQ3MJ40 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC144BQ3MJ40 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC144BQ3MJ40 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC144BQ3MJ40 RNU6-1252P-201ENST00000363054 104 ntBASIC4.24□□□□□ -1.73
CCDC144BQ3MJ40 SNORA14A-201ENST00000364773 135 ntBASIC4.24□□□□□ -1.73
CCDC144BQ3MJ40 Y_RNA.301-201ENST00000364990 103 ntBASIC4.24□□□□□ -1.73
CCDC144BQ3MJ40 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC144BQ3MJ40 RNU2-41P-201ENST00000410991 178 ntBASIC4.24□□□□□ -1.73
CCDC144BQ3MJ40 AL139396.1-201ENST00000421137 167 ntBASIC4.24□□□□□ -1.73
CCDC144BQ3MJ40 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC144BQ3MJ40 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.24□□□□□ -1.73
CCDC144BQ3MJ40 SNAP23P1-201ENST00000433229 246 ntBASIC4.24□□□□□ -1.73
CCDC144BQ3MJ40 CYCSP32-201ENST00000440548 321 ntBASIC4.24□□□□□ -1.73
CCDC144BQ3MJ40 HMGN2P10-201ENST00000448085 265 ntBASIC4.24□□□□□ -1.73
CCDC144BQ3MJ40 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC144BQ3MJ40 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.24□□□□□ -1.73
CCDC144BQ3MJ40 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC144BQ3MJ40 RNU6-507P-201ENST00000516045 100 ntBASIC4.24□□□□□ -1.73
CCDC144BQ3MJ40 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.24□□□□□ -1.73
CCDC144BQ3MJ40 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC4.24□□□□□ -1.73
CCDC144BQ3MJ40 MIR4738-201ENST00000579134 87 ntBASIC4.24□□□□□ -1.73
CCDC144BQ3MJ40 HMGN2P15-201ENST00000585707 270 ntBASIC4.24□□□□□ -1.73
CCDC144BQ3MJ40 AC023043.2-201ENST00000589678 1026 ntBASIC4.24□□□□□ -1.73
CCDC144BQ3MJ40 AL451007.1-201ENST00000595491 289 ntBASIC4.24□□□□□ -1.73
CCDC144BQ3MJ40 AC243960.4-201ENST00000600532 288 ntBASIC4.24□□□□□ -1.73
CCDC144BQ3MJ40 SNORA62.6-201ENST00000606322 83 ntBASIC4.24□□□□□ -1.73
CCDC144BQ3MJ40 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CCDC144BQ3MJ40 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC144BQ3MJ40 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCDC144BQ3MJ40 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
CCDC144BQ3MJ40 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC144BQ3MJ40 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.23□□□□□ -1.73
CCDC144BQ3MJ40 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC144BQ3MJ40 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CCDC144BQ3MJ40 ADAM3A-203ENST00000461344 2157 ntBASIC4.23□□□□□ -1.73
CCDC144BQ3MJ40 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
CCDC144BQ3MJ40 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CCDC144BQ3MJ40 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC144BQ3MJ40 RNU6-72P-201ENST00000384285 79 ntBASIC4.23□□□□□ -1.73
CCDC144BQ3MJ40 AC245291.1-201ENST00000419501 328 ntBASIC4.23□□□□□ -1.73
CCDC144BQ3MJ40 AL353678.1-201ENST00000422735 741 ntBASIC4.23□□□□□ -1.73
CCDC144BQ3MJ40 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC144BQ3MJ40 HIGD1AP2-201ENST00000446367 280 ntBASIC4.23□□□□□ -1.73
CCDC144BQ3MJ40 RPL21P23-201ENST00000446654 460 ntBASIC4.23□□□□□ -1.73
CCDC144BQ3MJ40 AC233279.1-201ENST00000455300 423 ntBASIC4.23□□□□□ -1.73
CCDC144BQ3MJ40 AL031183.1-201ENST00000457667 207 ntBASIC4.23□□□□□ -1.73
CCDC144BQ3MJ40 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC144BQ3MJ40 RPS29P20-201ENST00000489592 171 ntBASIC4.23□□□□□ -1.73
CCDC144BQ3MJ40 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.23□□□□□ -1.73
CCDC144BQ3MJ40 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC144BQ3MJ40 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.23□□□□□ -1.73
CCDC144BQ3MJ40 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.23□□□□□ -1.73
CCDC144BQ3MJ40 AC008121.1-201ENST00000603244 268 ntBASIC4.23□□□□□ -1.73
CCDC144BQ3MJ40 AL442067.2-201ENST00000614033 363 ntBASIC4.23□□□□□ -1.73
CCDC144BQ3MJ40 FAM157A-202ENST00000615155 405 ntBASIC4.23□□□□□ -1.73
CCDC144BQ3MJ40 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCDC144BQ3MJ40 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
CCDC144BQ3MJ40 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC144BQ3MJ40 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC144BQ3MJ40 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCDC144BQ3MJ40 Z98749.2-208ENST00000381646 500 ntBASIC4.22□□□□□ -1.73
CCDC144BQ3MJ40 MTHFD2P2-201ENST00000407725 247 ntBASIC4.22□□□□□ -1.73
CCDC144BQ3MJ40 UBE2V1P4-201ENST00000425374 344 ntBASIC4.22□□□□□ -1.73
CCDC144BQ3MJ40 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.22□□□□□ -1.73
CCDC144BQ3MJ40 SNRPEP8-201ENST00000442866 260 ntBASIC4.22□□□□□ -1.73
CCDC144BQ3MJ40 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.22□□□□□ -1.73
CCDC144BQ3MJ40 NIPA2P5-201ENST00000452282 464 ntBASIC4.22□□□□□ -1.73
CCDC144BQ3MJ40 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms