Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
RFX7Q2KHR2 CYCSP33-201ENST00000414485 327 ntBASIC1.21□□□□□ -2.22
RFX7Q2KHR2 AL449283.1-202ENST00000418249 604 ntBASIC1.21□□□□□ -2.22
RFX7Q2KHR2 SNRPFP3-201ENST00000457792 225 ntBASIC1.21□□□□□ -2.22
RFX7Q2KHR2 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.21□□□□□ -2.22
RFX7Q2KHR2 RNA5SP165-201ENST00000517142 115 ntBASIC1.21□□□□□ -2.22
RFX7Q2KHR2 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.21□□□□□ -2.22
RFX7Q2KHR2 AC007349.4-201ENST00000608114 532 ntBASIC1.21□□□□□ -2.22
RFX7Q2KHR2 AL589743.7-201ENST00000612637 233 ntBASIC1.21□□□□□ -2.22
RFX7Q2KHR2 AC006213.5-201ENST00000619673 288 ntBASIC1.21□□□□□ -2.22
RFX7Q2KHR2 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
RFX7Q2KHR2 ZNF849P-201ENST00000594711 1566 ntBASIC1.2□□□□□ -2.22
RFX7Q2KHR2 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
RFX7Q2KHR2 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
RFX7Q2KHR2 RNU6-37P-201ENST00000362692 107 ntBASIC1.2□□□□□ -2.22
RFX7Q2KHR2 SNORD56.4-201ENST00000363883 71 ntBASIC1.2□□□□□ -2.22
RFX7Q2KHR2 RNU6-11P-201ENST00000364234 107 ntBASIC1.2□□□□□ -2.22
RFX7Q2KHR2 RNU6-338P-201ENST00000383888 105 ntBASIC1.2□□□□□ -2.22
RFX7Q2KHR2 Y_RNA.393-201ENST00000383936 102 ntBASIC1.2□□□□□ -2.22
RFX7Q2KHR2 RNU6-1105P-201ENST00000384774 107 ntBASIC1.2□□□□□ -2.22
RFX7Q2KHR2 MIR518A2-201ENST00000384966 87 ntBASIC1.2□□□□□ -2.22
RFX7Q2KHR2 MIR532-201ENST00000385025 91 ntBASIC1.2□□□□□ -2.22
RFX7Q2KHR2 MIR888-201ENST00000401186 77 ntBASIC1.2□□□□□ -2.22
RFX7Q2KHR2 AL133264.1-201ENST00000407157 562 ntBASIC1.2□□□□□ -2.22
RFX7Q2KHR2 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.2□□□□□ -2.22
RFX7Q2KHR2 SFR1P2-201ENST00000421841 730 ntBASIC1.2□□□□□ -2.22
RFX7Q2KHR2 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.2□□□□□ -2.22
RFX7Q2KHR2 RPL30P4-201ENST00000429309 333 ntBASIC1.2□□□□□ -2.22
RFX7Q2KHR2 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.2□□□□□ -2.22
RFX7Q2KHR2 AC114878.1-201ENST00000441166 358 ntBASIC1.2□□□□□ -2.22
RFX7Q2KHR2 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.2□□□□□ -2.22
RFX7Q2KHR2 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.2□□□□□ -2.22
RFX7Q2KHR2 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.2□□□□□ -2.22
RFX7Q2KHR2 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.2□□□□□ -2.22
RFX7Q2KHR2 SNORA31.16-201ENST00000516773 139 ntBASIC1.2□□□□□ -2.22
RFX7Q2KHR2 HSPA8P13-201ENST00000523715 472 ntBASIC1.2□□□□□ -2.22
RFX7Q2KHR2 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.2□□□□□ -2.22
RFX7Q2KHR2 IMMP1LP2-201ENST00000552954 492 ntBASIC1.2□□□□□ -2.22
RFX7Q2KHR2 AL121821.2-201ENST00000556081 394 ntBASIC1.2□□□□□ -2.22
RFX7Q2KHR2 AC011712.1-201ENST00000588959 234 ntBASIC1.2□□□□□ -2.22
RFX7Q2KHR2 AL138963.2-201ENST00000605137 226 ntBASIC1.2□□□□□ -2.22
RFX7Q2KHR2 FTX_3.1-201ENST00000610451 147 ntBASIC1.2□□□□□ -2.22
RFX7Q2KHR2 AL159972.1-201ENST00000625150 448 ntBASIC1.2□□□□□ -2.22
RFX7Q2KHR2 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.19□□□□□ -2.22
RFX7Q2KHR2 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.19□□□□□ -2.22
RFX7Q2KHR2 MTCO3P1-205ENST00000422088 832 ntBASIC1.19□□□□□ -2.22
RFX7Q2KHR2 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.19□□□□□ -2.22
RFX7Q2KHR2 AC234064.1-201ENST00000436312 247 ntBASIC1.19□□□□□ -2.22
RFX7Q2KHR2 VN1R10P-201ENST00000447106 875 ntBASIC1.19□□□□□ -2.22
RFX7Q2KHR2 RPS27P1-201ENST00000450552 247 ntBASIC1.19□□□□□ -2.22
RFX7Q2KHR2 AL353691.1-201ENST00000451332 387 ntBASIC1.19□□□□□ -2.22
RFX7Q2KHR2 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.19□□□□□ -2.22
RFX7Q2KHR2 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.19□□□□□ -2.22
RFX7Q2KHR2 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.19□□□□□ -2.22
RFX7Q2KHR2 DUXAP5-201ENST00000529668 529 ntBASIC1.19□□□□□ -2.22
RFX7Q2KHR2 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.19□□□□□ -2.22
RFX7Q2KHR2 DUXAP1-201ENST00000556632 463 ntBASIC1.19□□□□□ -2.22
RFX7Q2KHR2 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.19□□□□□ -2.22
RFX7Q2KHR2 MIR5000-201ENST00000577717 103 ntBASIC1.19□□□□□ -2.22
RFX7Q2KHR2 MIR4422-201ENST00000581938 83 ntBASIC1.19□□□□□ -2.22
RFX7Q2KHR2 MIR4765-201ENST00000585007 77 ntBASIC1.19□□□□□ -2.22
RFX7Q2KHR2 BNIP3P24-201ENST00000593398 557 ntBASIC1.19□□□□□ -2.22
RFX7Q2KHR2 VN1R107P-201ENST00000601784 209 ntBASIC1.19□□□□□ -2.22
RFX7Q2KHR2 AP001429.1-201ENST00000602568 530 ntBASIC1.19□□□□□ -2.22
RFX7Q2KHR2 AL121652.1-201ENST00000608851 448 ntBASIC1.19□□□□□ -2.22
RFX7Q2KHR2 AC024581.2-201ENST00000619986 252 ntBASIC1.19□□□□□ -2.22
RFX7Q2KHR2 AL590396.4-201ENST00000636779 956 ntBASIC1.19□□□□□ -2.22
RFX7Q2KHR2 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.18□□□□□ -2.22
RFX7Q2KHR2 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
RFX7Q2KHR2 RNU6-486P-201ENST00000363116 107 ntBASIC1.18□□□□□ -2.22
RFX7Q2KHR2 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
RFX7Q2KHR2 RNU1-139P-201ENST00000391307 165 ntBASIC1.18□□□□□ -2.22
RFX7Q2KHR2 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.18□□□□□ -2.22
RFX7Q2KHR2 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.18□□□□□ -2.22
RFX7Q2KHR2 AC007395.1-201ENST00000451333 677 ntBASIC1.18□□□□□ -2.22
RFX7Q2KHR2 AC108059.3-201ENST00000456388 214 ntBASIC1.18□□□□□ -2.22
RFX7Q2KHR2 RPS20P20-201ENST00000460498 340 ntBASIC1.18□□□□□ -2.22
RFX7Q2KHR2 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.18□□□□□ -2.22
RFX7Q2KHR2 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.18□□□□□ -2.22
RFX7Q2KHR2 SNORA31.6-201ENST00000516241 130 ntBASIC1.18□□□□□ -2.22
RFX7Q2KHR2 RNU6-840P-201ENST00000517275 65 ntBASIC1.18□□□□□ -2.22
RFX7Q2KHR2 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.18□□□□□ -2.22
RFX7Q2KHR2 HSPE1P4-201ENST00000550617 308 ntBASIC1.18□□□□□ -2.22
RFX7Q2KHR2 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.18□□□□□ -2.22
RFX7Q2KHR2 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.18□□□□□ -2.22
RFX7Q2KHR2 LARP7P2-201ENST00000575306 125 ntBASIC1.18□□□□□ -2.22
RFX7Q2KHR2 AC026271.5-201ENST00000577873 130 ntBASIC1.18□□□□□ -2.22
RFX7Q2KHR2 MIR3973-201ENST00000579824 107 ntBASIC1.18□□□□□ -2.22
RFX7Q2KHR2 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.18□□□□□ -2.22
RFX7Q2KHR2 MIR5739-201ENST00000619803 80 ntBASIC1.18□□□□□ -2.22
RFX7Q2KHR2 AC080188.3-201ENST00000624842 748 ntBASIC1.18□□□□□ -2.22
RFX7Q2KHR2 MIR4275-201ENST00000636486 87 ntBASIC1.18□□□□□ -2.22
RFX7Q2KHR2 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
RFX7Q2KHR2 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
RFX7Q2KHR2 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
RFX7Q2KHR2 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
RFX7Q2KHR2 MIR26B-201ENST00000362251 77 ntBASIC1.17□□□□□ -2.22
RFX7Q2KHR2 MIR618-201ENST00000385287 98 ntBASIC1.17□□□□□ -2.22
RFX7Q2KHR2 ERHP2-201ENST00000402323 299 ntBASIC1.17□□□□□ -2.22
RFX7Q2KHR2 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms