Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.85□□□□□ -1.79
SF3B3Q15393 RNU6-1155P-201ENST00000363554 107 ntBASIC3.85□□□□□ -1.79
SF3B3Q15393 RNU6-82P-201ENST00000363970 107 ntBASIC3.85□□□□□ -1.79
SF3B3Q15393 Y_RNA.315-201ENST00000365117 102 ntBASIC3.85□□□□□ -1.79
SF3B3Q15393 SMIM11P1-201ENST00000369586 178 ntBASIC3.85□□□□□ -1.79
SF3B3Q15393 RNU4-46P-201ENST00000410818 138 ntBASIC3.85□□□□□ -1.79
SF3B3Q15393 RNU4-78P-201ENST00000410940 126 ntBASIC3.85□□□□□ -1.79
SF3B3Q15393 BTF3L4P3-201ENST00000418879 476 ntBASIC3.85□□□□□ -1.79
SF3B3Q15393 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.85□□□□□ -1.79
SF3B3Q15393 RAC1P6-201ENST00000423911 575 ntBASIC3.85□□□□□ -1.79
SF3B3Q15393 AL139132.1-201ENST00000431587 344 ntBASIC3.85□□□□□ -1.79
SF3B3Q15393 MTND4P19-201ENST00000446659 478 ntBASIC3.85□□□□□ -1.79
SF3B3Q15393 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.85□□□□□ -1.79
SF3B3Q15393 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.85□□□□□ -1.79
SF3B3Q15393 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SF3B3Q15393 AC104806.1-201ENST00000508720 308 ntBASIC3.85□□□□□ -1.79
SF3B3Q15393 AC108078.2-201ENST00000510750 236 ntBASIC3.85□□□□□ -1.79
SF3B3Q15393 RPL23AP94-201ENST00000512518 302 ntBASIC3.85□□□□□ -1.79
SF3B3Q15393 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.85□□□□□ -1.79
SF3B3Q15393 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.85□□□□□ -1.79
SF3B3Q15393 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.85□□□□□ -1.79
SF3B3Q15393 AC020661.2-201ENST00000560114 134 ntBASIC3.85□□□□□ -1.79
SF3B3Q15393 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.85□□□□□ -1.79
SF3B3Q15393 MIR4474-201ENST00000579189 78 ntBASIC3.85□□□□□ -1.79
SF3B3Q15393 MIR3942-201ENST00000585264 109 ntBASIC3.85□□□□□ -1.79
SF3B3Q15393 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.85□□□□□ -1.79
SF3B3Q15393 AL670379.6-201ENST00000603753 252 ntBASIC3.85□□□□□ -1.79
SF3B3Q15393 AL670379.11-201ENST00000604059 253 ntBASIC3.85□□□□□ -1.79
SF3B3Q15393 AC008162.1-201ENST00000604718 254 ntBASIC3.85□□□□□ -1.79
SF3B3Q15393 AL670379.1-201ENST00000604752 252 ntBASIC3.85□□□□□ -1.79
SF3B3Q15393 AL670379.5-201ENST00000605253 252 ntBASIC3.85□□□□□ -1.79
SF3B3Q15393 AL670379.12-201ENST00000605291 253 ntBASIC3.85□□□□□ -1.79
SF3B3Q15393 AL670379.8-201ENST00000605353 252 ntBASIC3.85□□□□□ -1.79
SF3B3Q15393 AL670379.7-201ENST00000605823 252 ntBASIC3.85□□□□□ -1.79
SF3B3Q15393 AC004696.1-201ENST00000614345 607 ntBASIC3.85□□□□□ -1.79
SF3B3Q15393 uc_338.15-201ENST00000615470 191 ntBASIC3.85□□□□□ -1.79
SF3B3Q15393 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.85□□□□□ -1.79
SF3B3Q15393 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.85□□□□□ -1.79
SF3B3Q15393 AL021368.2-201ENST00000606125 5352 ntBASIC3.85□□□□□ -1.79
SF3B3Q15393 DDX10P1-201ENST00000448545 1933 ntBASIC3.85□□□□□ -1.79
SF3B3Q15393 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SF3B3Q15393 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SF3B3Q15393 AC103710.2-202ENST00000641454 2853 ntBASIC3.84□□□□□ -1.79
SF3B3Q15393 TPTE2P4-201ENST00000258589 1605 ntBASIC3.84□□□□□ -1.79
SF3B3Q15393 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.79
SF3B3Q15393 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SF3B3Q15393 AC005183.1-201ENST00000603687 1979 ntBASIC3.84□□□□□ -1.79
SF3B3Q15393 RNU6-1287P-201ENST00000362914 107 ntBASIC3.84□□□□□ -1.79
SF3B3Q15393 RNU6-7-201ENST00000364784 107 ntBASIC3.84□□□□□ -1.79
SF3B3Q15393 Y_RNA.339-201ENST00000365325 102 ntBASIC3.84□□□□□ -1.79
SF3B3Q15393 RNU6-8-201ENST00000365467 107 ntBASIC3.84□□□□□ -1.79
SF3B3Q15393 RNU6-1013P-201ENST00000384180 107 ntBASIC3.84□□□□□ -1.79
SF3B3Q15393 RNU6-1060P-201ENST00000384664 107 ntBASIC3.84□□□□□ -1.79
SF3B3Q15393 RNU6-550P-201ENST00000391057 101 ntBASIC3.84□□□□□ -1.79
SF3B3Q15393 RNA5SP129-201ENST00000410276 118 ntBASIC3.84□□□□□ -1.79
SF3B3Q15393 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.84□□□□□ -1.79
SF3B3Q15393 AL137014.1-201ENST00000420490 1226 ntBASIC3.84□□□□□ -1.79
SF3B3Q15393 RPS24P6-201ENST00000452670 400 ntBASIC3.84□□□□□ -1.79
SF3B3Q15393 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.84□□□□□ -1.79
SF3B3Q15393 AC010631.1-201ENST00000474150 156 ntBASIC3.84□□□□□ -1.79
SF3B3Q15393 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.84□□□□□ -1.79
SF3B3Q15393 SNORA25.17-201ENST00000517184 124 ntBASIC3.84□□□□□ -1.79
SF3B3Q15393 AL163153.1-201ENST00000554223 283 ntBASIC3.84□□□□□ -1.79
SF3B3Q15393 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.84□□□□□ -1.79
SF3B3Q15393 AC093249.1-201ENST00000567049 203 ntBASIC3.84□□□□□ -1.79
SF3B3Q15393 AC012182.1-201ENST00000570133 895 ntBASIC3.84□□□□□ -1.79
SF3B3Q15393 AC008521.1-201ENST00000587471 187 ntBASIC3.84□□□□□ -1.79
SF3B3Q15393 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.84□□□□□ -1.79
SF3B3Q15393 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.84□□□□□ -1.79
SF3B3Q15393 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.84□□□□□ -1.79
SF3B3Q15393 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.84□□□□□ -1.8
SF3B3Q15393 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SF3B3Q15393 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SF3B3Q15393 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.84□□□□□ -1.8
SF3B3Q15393 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SF3B3Q15393 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SF3B3Q15393 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
SF3B3Q15393 AC000403.1-201ENST00000613696 3585 ntBASIC3.83□□□□□ -1.8
SF3B3Q15393 Y_RNA.259-201ENST00000364619 101 ntBASIC3.83□□□□□ -1.8
SF3B3Q15393 RNU6-946P-201ENST00000383878 107 ntBASIC3.83□□□□□ -1.8
SF3B3Q15393 RNU6-837P-201ENST00000391056 108 ntBASIC3.83□□□□□ -1.8
SF3B3Q15393 EI24P2-201ENST00000397776 1076 ntBASIC3.83□□□□□ -1.8
SF3B3Q15393 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.83□□□□□ -1.8
SF3B3Q15393 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.83□□□□□ -1.8
SF3B3Q15393 HMGN2P20-201ENST00000437531 273 ntBASIC3.83□□□□□ -1.8
SF3B3Q15393 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.83□□□□□ -1.8
SF3B3Q15393 AC026801.2-201ENST00000515352 425 ntBASIC3.83□□□□□ -1.8
SF3B3Q15393 RNU6-685P-201ENST00000517088 95 ntBASIC3.83□□□□□ -1.8
SF3B3Q15393 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.83□□□□□ -1.8
SF3B3Q15393 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.83□□□□□ -1.8
SF3B3Q15393 OR11H5P-201ENST00000554039 926 ntBASIC3.83□□□□□ -1.8
SF3B3Q15393 FRG2DP-202ENST00000566967 323 ntBASIC3.83□□□□□ -1.8
SF3B3Q15393 MIR4298-201ENST00000584380 73 ntBASIC3.83□□□□□ -1.8
SF3B3Q15393 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.83□□□□□ -1.8
SF3B3Q15393 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.83□□□□□ -1.8
SF3B3Q15393 Z82243.1-201ENST00000609432 473 ntBASIC3.83□□□□□ -1.8
SF3B3Q15393 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.83□□□□□ -1.8
SF3B3Q15393 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SF3B3Q15393 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
SF3B3Q15393 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms