Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.15□□□□□ -2.07
RAB40BQ12829 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.15□□□□□ -2.07
RAB40BQ12829 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.15□□□□□ -2.07
RAB40BQ12829 AC096576.1-201ENST00000489014 359 ntBASIC2.15□□□□□ -2.07
RAB40BQ12829 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.15□□□□□ -2.07
RAB40BQ12829 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.15□□□□□ -2.07
RAB40BQ12829 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.15□□□□□ -2.07
RAB40BQ12829 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.15□□□□□ -2.07
RAB40BQ12829 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.15□□□□□ -2.07
RAB40BQ12829 RNA5SP112-201ENST00000515937 99 ntBASIC2.15□□□□□ -2.07
RAB40BQ12829 RNU6-123P-201ENST00000516163 102 ntBASIC2.15□□□□□ -2.07
RAB40BQ12829 AC010186.2-204ENST00000537668 439 ntBASIC2.15□□□□□ -2.07
RAB40BQ12829 AL139286.2-201ENST00000606838 396 ntBASIC2.15□□□□□ -2.07
RAB40BQ12829 AC126118.1-201ENST00000607744 628 ntBASIC2.15□□□□□ -2.07
RAB40BQ12829 AC011890.2-201ENST00000613393 294 ntBASIC2.15□□□□□ -2.07
RAB40BQ12829 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
RAB40BQ12829 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.15□□□□□ -2.07
RAB40BQ12829 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
RAB40BQ12829 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
RAB40BQ12829 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.15□□□□□ -2.07
RAB40BQ12829 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
RAB40BQ12829 AC103710.2-202ENST00000641454 2853 ntBASIC2.14□□□□□ -2.07
RAB40BQ12829 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.14□□□□□ -2.07
RAB40BQ12829 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
RAB40BQ12829 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
RAB40BQ12829 U8.3-201ENST00000363321 132 ntBASIC2.14□□□□□ -2.07
RAB40BQ12829 RNA5SP393-201ENST00000363423 117 ntBASIC2.14□□□□□ -2.07
RAB40BQ12829 SNORA24.1-201ENST00000384401 135 ntBASIC2.14□□□□□ -2.07
RAB40BQ12829 SNORA26.8-201ENST00000391306 124 ntBASIC2.14□□□□□ -2.07
RAB40BQ12829 CISD1P1-201ENST00000393907 327 ntBASIC2.14□□□□□ -2.07
RAB40BQ12829 AL049545.1-201ENST00000401856 572 ntBASIC2.14□□□□□ -2.07
RAB40BQ12829 AC009518.2-201ENST00000418056 731 ntBASIC2.14□□□□□ -2.07
RAB40BQ12829 BX276092.3-201ENST00000424182 230 ntBASIC2.14□□□□□ -2.07
RAB40BQ12829 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.14□□□□□ -2.07
RAB40BQ12829 AC092447.3-201ENST00000426027 686 ntBASIC2.14□□□□□ -2.07
RAB40BQ12829 MTCO3P30-201ENST00000426425 670 ntBASIC2.14□□□□□ -2.07
RAB40BQ12829 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.14□□□□□ -2.07
RAB40BQ12829 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.14□□□□□ -2.07
RAB40BQ12829 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.14□□□□□ -2.07
RAB40BQ12829 AC025750.2-201ENST00000442609 450 ntBASIC2.14□□□□□ -2.07
RAB40BQ12829 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
RAB40BQ12829 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.14□□□□□ -2.07
RAB40BQ12829 AL583843.1-201ENST00000456070 346 ntBASIC2.14□□□□□ -2.07
RAB40BQ12829 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.14□□□□□ -2.07
RAB40BQ12829 RN7SKP24-201ENST00000515888 284 ntBASIC2.14□□□□□ -2.07
RAB40BQ12829 Vault.3-201ENST00000516676 95 ntBASIC2.14□□□□□ -2.07
RAB40BQ12829 RNU6-1220P-201ENST00000517126 108 ntBASIC2.14□□□□□ -2.07
RAB40BQ12829 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.14□□□□□ -2.07
RAB40BQ12829 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.14□□□□□ -2.07
RAB40BQ12829 AC009163.5-201ENST00000575421 637 ntBASIC2.14□□□□□ -2.07
RAB40BQ12829 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
RAB40BQ12829 MIR3682-201ENST00000581338 84 ntBASIC2.14□□□□□ -2.07
RAB40BQ12829 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.14□□□□□ -2.07
RAB40BQ12829 AL022154.1-201ENST00000604698 785 ntBASIC2.14□□□□□ -2.07
RAB40BQ12829 AL449363.1-201ENST00000617815 186 ntBASIC2.14□□□□□ -2.07
RAB40BQ12829 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.14□□□□□ -2.07
RAB40BQ12829 AL603839.4-201ENST00000624658 1005 ntBASIC2.14□□□□□ -2.07
RAB40BQ12829 SCARNA15.3-201ENST00000626315 122 ntBASIC2.14□□□□□ -2.07
RAB40BQ12829 SCARNA4.1-201ENST00000628597 123 ntBASIC2.14□□□□□ -2.07
RAB40BQ12829 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
RAB40BQ12829 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
RAB40BQ12829 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
RAB40BQ12829 ZNF720P1-201ENST00000562403 1939 ntBASIC2.13□□□□□ -2.07
RAB40BQ12829 AC016717.2-201ENST00000609089 5141 ntBASIC2.13□□□□□ -2.07
RAB40BQ12829 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.13□□□□□ -2.07
RAB40BQ12829 Y_RNA.22-201ENST00000362492 102 ntBASIC2.13□□□□□ -2.07
RAB40BQ12829 RNU6-486P-201ENST00000363116 107 ntBASIC2.13□□□□□ -2.07
RAB40BQ12829 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
RAB40BQ12829 SNORA75B-201ENST00000384053 137 ntBASIC2.13□□□□□ -2.07
RAB40BQ12829 RNU1-138P-201ENST00000384093 164 ntBASIC2.13□□□□□ -2.07
RAB40BQ12829 MIR518D-201ENST00000385014 87 ntBASIC2.13□□□□□ -2.07
RAB40BQ12829 SNORA40.3-201ENST00000390964 122 ntBASIC2.13□□□□□ -2.07
RAB40BQ12829 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
RAB40BQ12829 AL139039.1-201ENST00000401900 692 ntBASIC2.13□□□□□ -2.07
RAB40BQ12829 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.13□□□□□ -2.07
RAB40BQ12829 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.13□□□□□ -2.07
RAB40BQ12829 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.13□□□□□ -2.07
RAB40BQ12829 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.13□□□□□ -2.07
RAB40BQ12829 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.13□□□□□ -2.07
RAB40BQ12829 snoU109.1-201ENST00000459339 135 ntBASIC2.13□□□□□ -2.07
RAB40BQ12829 MTND4P2-201ENST00000507767 1203 ntBASIC2.13□□□□□ -2.07
RAB40BQ12829 AC118465.1-201ENST00000513820 1271 ntBASIC2.13□□□□□ -2.07
RAB40BQ12829 AC060788.1-201ENST00000521318 469 ntBASIC2.13□□□□□ -2.07
RAB40BQ12829 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.13□□□□□ -2.07
RAB40BQ12829 GTF3AP2-201ENST00000557014 266 ntBASIC2.13□□□□□ -2.07
RAB40BQ12829 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.13□□□□□ -2.07
RAB40BQ12829 AC105245.1-201ENST00000581934 244 ntBASIC2.13□□□□□ -2.07
RAB40BQ12829 AC068276.1-201ENST00000605793 379 ntBASIC2.13□□□□□ -2.07
RAB40BQ12829 AC069294.1-201ENST00000608397 350 ntBASIC2.13□□□□□ -2.07
RAB40BQ12829 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.13□□□□□ -2.07
RAB40BQ12829 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
RAB40BQ12829 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.13□□□□□ -2.07
RAB40BQ12829 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.13□□□□□ -2.07
RAB40BQ12829 AC019226.2-201ENST00000625973 424 ntBASIC2.13□□□□□ -2.07
RAB40BQ12829 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.13□□□□□ -2.07
RAB40BQ12829 AC110994.2-201ENST00000635481 492 ntBASIC2.13□□□□□ -2.07
RAB40BQ12829 AC093536.2-201ENST00000565257 1406 ntBASIC2.13□□□□□ -2.07
RAB40BQ12829 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
RAB40BQ12829 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
RAB40BQ12829 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms