Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 MIR1290-201ENST00000408735 78 ntBASIC0.92□□□□□ -2.26
HMGXB3Q12766 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.92□□□□□ -2.26
HMGXB3Q12766 MTCO1P3-201ENST00000429327 192 ntBASIC0.92□□□□□ -2.26
HMGXB3Q12766 MTND4LP10-201ENST00000435146 291 ntBASIC0.92□□□□□ -2.26
HMGXB3Q12766 AC004865.1-201ENST00000442276 1003 ntBASIC0.92□□□□□ -2.26
HMGXB3Q12766 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.92□□□□□ -2.26
HMGXB3Q12766 AL049714.1-201ENST00000466686 347 ntBASIC0.92□□□□□ -2.26
HMGXB3Q12766 OR2A41P-201ENST00000473586 105 ntBASIC0.92□□□□□ -2.26
HMGXB3Q12766 SNORA62.5-201ENST00000516634 120 ntBASIC0.92□□□□□ -2.26
HMGXB3Q12766 DEFB108D-201ENST00000527787 222 ntBASIC0.92□□□□□ -2.26
HMGXB3Q12766 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.92□□□□□ -2.26
HMGXB3Q12766 AL391261.3-201ENST00000557194 520 ntBASIC0.92□□□□□ -2.26
HMGXB3Q12766 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.92□□□□□ -2.26
HMGXB3Q12766 AL021997.1-201ENST00000605757 193 ntBASIC0.92□□□□□ -2.26
HMGXB3Q12766 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.92□□□□□ -2.26
HMGXB3Q12766 AC090132.2-201ENST00000615881 347 ntBASIC0.92□□□□□ -2.26
HMGXB3Q12766 U4atac.1-201ENST00000618345 95 ntBASIC0.92□□□□□ -2.26
HMGXB3Q12766 AC068057.2-201ENST00000624047 895 ntBASIC0.92□□□□□ -2.26
HMGXB3Q12766 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.92□□□□□ -2.26
HMGXB3Q12766 AC092393.1-201ENST00000439625 742 ntBASIC0.91□□□□□ -2.26
HMGXB3Q12766 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.91□□□□□ -2.26
HMGXB3Q12766 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.91□□□□□ -2.26
HMGXB3Q12766 RPS20P24-201ENST00000457473 361 ntBASIC0.91□□□□□ -2.26
HMGXB3Q12766 TRBVB-201ENST00000477100 408 ntBASIC0.91□□□□□ -2.26
HMGXB3Q12766 FAM206BP-201ENST00000510179 541 ntBASIC0.91□□□□□ -2.26
HMGXB3Q12766 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.91□□□□□ -2.26
HMGXB3Q12766 RNU4ATAC10P-201ENST00000516967 122 ntBASIC0.91□□□□□ -2.26
HMGXB3Q12766 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC0.91□□□□□ -2.26
HMGXB3Q12766 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.91□□□□□ -2.26
HMGXB3Q12766 AC093510.2-201ENST00000562820 896 ntBASIC0.91□□□□□ -2.26
HMGXB3Q12766 MIR4802-201ENST00000581881 80 ntBASIC0.91□□□□□ -2.26
HMGXB3Q12766 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.91□□□□□ -2.26
HMGXB3Q12766 AC010620.1-201ENST00000601088 1102 ntBASIC0.91□□□□□ -2.26
HMGXB3Q12766 AC110792.4-201ENST00000609843 298 ntBASIC0.91□□□□□ -2.26
HMGXB3Q12766 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC0.91□□□□□ -2.26
HMGXB3Q12766 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.9□□□□□ -2.26
HMGXB3Q12766 PTENP1-201ENST00000447117 1215 ntBASIC0.9□□□□□ -2.26
HMGXB3Q12766 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.9□□□□□ -2.26
HMGXB3Q12766 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.9□□□□□ -2.26
HMGXB3Q12766 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.9□□□□□ -2.26
HMGXB3Q12766 MIR3198-2-201ENST00000577868 80 ntBASIC0.9□□□□□ -2.26
HMGXB3Q12766 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.9□□□□□ -2.26
HMGXB3Q12766 AC016252.1-201ENST00000609721 474 ntBASIC0.9□□□□□ -2.26
HMGXB3Q12766 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.26
HMGXB3Q12766 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.9□□□□□ -2.26
HMGXB3Q12766 RNU6-1187P-201ENST00000364771 110 ntBASIC0.89□□□□□ -2.27
HMGXB3Q12766 U3.13-201ENST00000364804 214 ntBASIC0.89□□□□□ -2.27
HMGXB3Q12766 AL356421.1-201ENST00000403255 413 ntBASIC0.89□□□□□ -2.27
HMGXB3Q12766 AC023141.4-201ENST00000412031 328 ntBASIC0.89□□□□□ -2.27
HMGXB3Q12766 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC0.89□□□□□ -2.27
HMGXB3Q12766 AL392003.1-201ENST00000434394 243 ntBASIC0.89□□□□□ -2.27
HMGXB3Q12766 RPL26P9-201ENST00000457466 433 ntBASIC0.89□□□□□ -2.27
HMGXB3Q12766 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.89□□□□□ -2.27
HMGXB3Q12766 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC0.89□□□□□ -2.27
HMGXB3Q12766 MIR4713-201ENST00000582691 75 ntBASIC0.89□□□□□ -2.27
HMGXB3Q12766 BNIP3P25-201ENST00000596023 559 ntBASIC0.89□□□□□ -2.27
HMGXB3Q12766 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
HMGXB3Q12766 MTND5P11-201ENST00000511037 1812 ntBASIC0.89□□□□□ -2.27
HMGXB3Q12766 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
HMGXB3Q12766 RNU6-1083P-201ENST00000384022 107 ntBASIC0.89□□□□□ -2.27
HMGXB3Q12766 MIR218-1-201ENST00000384999 110 ntBASIC0.89□□□□□ -2.27
HMGXB3Q12766 HMGN2P39-201ENST00000398005 273 ntBASIC0.89□□□□□ -2.27
HMGXB3Q12766 TAF9BP2-201ENST00000400856 499 ntBASIC0.89□□□□□ -2.27
HMGXB3Q12766 RNU2-70P-201ENST00000410718 179 ntBASIC0.89□□□□□ -2.27
HMGXB3Q12766 RNU6-1095P-201ENST00000516148 108 ntBASIC0.89□□□□□ -2.27
HMGXB3Q12766 AC022616.2-201ENST00000523185 300 ntBASIC0.89□□□□□ -2.27
HMGXB3Q12766 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
HMGXB3Q12766 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC0.89□□□□□ -2.27
HMGXB3Q12766 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
HMGXB3Q12766 RNU6-1164P-201ENST00000364428 107 ntBASIC0.88□□□□□ -2.27
HMGXB3Q12766 RNU6-730P-201ENST00000383954 104 ntBASIC0.88□□□□□ -2.27
HMGXB3Q12766 AC241584.1-201ENST00000438469 1241 ntBASIC0.88□□□□□ -2.27
HMGXB3Q12766 AF213884.2-201ENST00000510417 903 ntBASIC0.88□□□□□ -2.27
HMGXB3Q12766 RNU6-488P-201ENST00000515918 99 ntBASIC0.88□□□□□ -2.27
HMGXB3Q12766 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.88□□□□□ -2.27
HMGXB3Q12766 SNORA44.1-201ENST00000517031 108 ntBASIC0.88□□□□□ -2.27
HMGXB3Q12766 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC0.88□□□□□ -2.27
HMGXB3Q12766 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.88□□□□□ -2.27
HMGXB3Q12766 AC069294.1-201ENST00000608397 350 ntBASIC0.88□□□□□ -2.27
HMGXB3Q12766 AC006213.5-201ENST00000619673 288 ntBASIC0.88□□□□□ -2.27
HMGXB3Q12766 uc_338.22-201ENST00000622722 187 ntBASIC0.88□□□□□ -2.27
HMGXB3Q12766 AL589655.1-201ENST00000405398 482 ntBASIC0.87□□□□□ -2.27
HMGXB3Q12766 MTND6P13-201ENST00000443510 523 ntBASIC0.87□□□□□ -2.27
HMGXB3Q12766 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.87□□□□□ -2.27
HMGXB3Q12766 AC104692.1-201ENST00000472406 90 ntBASIC0.87□□□□□ -2.27
HMGXB3Q12766 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0.87□□□□□ -2.27
HMGXB3Q12766 RNA5SP137-201ENST00000516833 135 ntBASIC0.87□□□□□ -2.27
HMGXB3Q12766 C1DP5-201ENST00000525775 383 ntBASIC0.87□□□□□ -2.27
HMGXB3Q12766 FRG1HP-204ENST00000617940 757 ntBASIC0.87□□□□□ -2.27
HMGXB3Q12766 AC008443.7-201ENST00000622195 246 ntBASIC0.87□□□□□ -2.27
HMGXB3Q12766 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC0.87□□□□□ -2.27
HMGXB3Q12766 RNU6-30P-201ENST00000384561 107 ntBASIC0.86□□□□□ -2.27
HMGXB3Q12766 SNORA8-201ENST00000384574 139 ntBASIC0.86□□□□□ -2.27
HMGXB3Q12766 SNORA40.19-201ENST00000390846 128 ntBASIC0.86□□□□□ -2.27
HMGXB3Q12766 LINC01347-201ENST00000417964 355 ntBASIC0.86□□□□□ -2.27
HMGXB3Q12766 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC0.86□□□□□ -2.27
HMGXB3Q12766 AL592447.1-201ENST00000447592 540 ntBASIC0.86□□□□□ -2.27
HMGXB3Q12766 AC079448.1-201ENST00000449377 373 ntBASIC0.86□□□□□ -2.27
HMGXB3Q12766 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.86□□□□□ -2.27
HMGXB3Q12766 GTF2IP12-201ENST00000456547 356 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms