Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 AC112492.4-201ENST00000456549 352 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 AC138853.1-201ENST00000503549 823 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 AC025857.1-201ENST00000525252 377 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.75□□□□□ -2.29
SCN7AQ01118 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.75□□□□□ -2.29
SCN7AQ01118 AC025588.3-201ENST00000604182 274 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 AC008945.2-201ENST00000606056 604 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 AL356585.4-201ENST00000623078 1229 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 AL109659.3-201ENST00000624985 950 ntBASIC0.75□□□□□ -2.29
SCN7AQ01118 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.75□□□□□ -2.29
SCN7AQ01118 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.74□□□□□ -2.29
SCN7AQ01118 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.74□□□□□ -2.29
SCN7AQ01118 AL589655.1-201ENST00000405398 482 ntBASIC0.74□□□□□ -2.29
SCN7AQ01118 AL449283.1-202ENST00000418249 604 ntBASIC0.74□□□□□ -2.29
SCN7AQ01118 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.74□□□□□ -2.29
SCN7AQ01118 AC024082.2-201ENST00000434771 238 ntBASIC0.74□□□□□ -2.29
SCN7AQ01118 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.74□□□□□ -2.29
SCN7AQ01118 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.74□□□□□ -2.29
SCN7AQ01118 AC104073.1-201ENST00000451988 151 ntBASIC0.74□□□□□ -2.29
SCN7AQ01118 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.74□□□□□ -2.29
SCN7AQ01118 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.74□□□□□ -2.29
SCN7AQ01118 OR6C7P-201ENST00000547875 934 ntBASIC0.74□□□□□ -2.29
SCN7AQ01118 AC006199.1-201ENST00000548728 219 ntBASIC0.74□□□□□ -2.29
SCN7AQ01118 AC015688.2-201ENST00000584523 262 ntBASIC0.74□□□□□ -2.29
SCN7AQ01118 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.74□□□□□ -2.29
SCN7AQ01118 AL078605.1-201ENST00000603529 500 ntBASIC0.74□□□□□ -2.29
SCN7AQ01118 MTND4LP5-201ENST00000605152 292 ntBASIC0.74□□□□□ -2.29
SCN7AQ01118 FTX_3.1-201ENST00000610451 147 ntBASIC0.74□□□□□ -2.29
SCN7AQ01118 AC008498.1-201ENST00000613012 531 ntBASIC0.74□□□□□ -2.29
SCN7AQ01118 BEND7P1-201ENST00000422058 457 ntBASIC0.73□□□□□ -2.29
SCN7AQ01118 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.73□□□□□ -2.29
SCN7AQ01118 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC0.73□□□□□ -2.29
SCN7AQ01118 AL354941.1-201ENST00000438600 464 ntBASIC0.73□□□□□ -2.29
SCN7AQ01118 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.73□□□□□ -2.29
SCN7AQ01118 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.73□□□□□ -2.29
SCN7AQ01118 AL096803.2-201ENST00000450032 677 ntBASIC0.73□□□□□ -2.29
SCN7AQ01118 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
SCN7AQ01118 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.73□□□□□ -2.29
SCN7AQ01118 CYCSP23-201ENST00000519781 313 ntBASIC0.73□□□□□ -2.29
SCN7AQ01118 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.73□□□□□ -2.29
SCN7AQ01118 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.73□□□□□ -2.29
SCN7AQ01118 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.73□□□□□ -2.29
SCN7AQ01118 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.73□□□□□ -2.29
SCN7AQ01118 AC018638.7-201ENST00000605836 1114 ntBASIC0.73□□□□□ -2.29
SCN7AQ01118 AC243829.6-201ENST00000612652 106 ntBASIC0.73□□□□□ -2.29
SCN7AQ01118 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0.73□□□□□ -2.29
SCN7AQ01118 ZNF663P-202ENST00000641770 1131 ntBASIC0.73□□□□□ -2.29
SCN7AQ01118 ELL2P3-201ENST00000457883 1602 ntBASIC0.73□□□□□ -2.29
SCN7AQ01118 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.73□□□□□ -2.29
SCN7AQ01118 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
SCN7AQ01118 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
SCN7AQ01118 RNU6-272P-201ENST00000411028 104 ntBASIC0.72□□□□□ -2.29
SCN7AQ01118 RNA5SP127-201ENST00000411051 133 ntBASIC0.72□□□□□ -2.29
SCN7AQ01118 AC096649.2-201ENST00000416186 393 ntBASIC0.72□□□□□ -2.29
SCN7AQ01118 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.72□□□□□ -2.29
SCN7AQ01118 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.72□□□□□ -2.29
SCN7AQ01118 AL512637.2-201ENST00000431287 1256 ntBASIC0.72□□□□□ -2.29
SCN7AQ01118 AL591704.1-201ENST00000432574 275 ntBASIC0.72□□□□□ -2.29
SCN7AQ01118 AL592447.1-201ENST00000447592 540 ntBASIC0.72□□□□□ -2.29
SCN7AQ01118 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.72□□□□□ -2.29
SCN7AQ01118 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.72□□□□□ -2.29
SCN7AQ01118 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.72□□□□□ -2.29
SCN7AQ01118 RNU6-27P-201ENST00000516146 107 ntBASIC0.72□□□□□ -2.29
SCN7AQ01118 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.72□□□□□ -2.29
SCN7AQ01118 AL356432.3-201ENST00000568952 465 ntBASIC0.72□□□□□ -2.29
SCN7AQ01118 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.72□□□□□ -2.29
SCN7AQ01118 AC104763.3-201ENST00000613765 618 ntBASIC0.72□□□□□ -2.29
SCN7AQ01118 U1.36-201ENST00000620684 176 ntBASIC0.72□□□□□ -2.29
SCN7AQ01118 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.72□□□□□ -2.29
SCN7AQ01118 ZNF29P-201ENST00000225587 168 ntBASIC0.72□□□□□ -2.29
SCN7AQ01118 RNU6-1187P-201ENST00000364771 110 ntBASIC0.72□□□□□ -2.29
SCN7AQ01118 VTRNA1-3-201ENST00000365645 89 ntBASIC0.72□□□□□ -2.29
SCN7AQ01118 MIR218-1-201ENST00000384999 110 ntBASIC0.72□□□□□ -2.29
SCN7AQ01118 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.72□□□□□ -2.29
SCN7AQ01118 AL160275.3-201ENST00000423876 471 ntBASIC0.72□□□□□ -2.29
SCN7AQ01118 RSU1P2-202ENST00000437884 485 ntBASIC0.72□□□□□ -2.29
SCN7AQ01118 DUXAP8-207ENST00000456786 622 ntBASIC0.72□□□□□ -2.29
SCN7AQ01118 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.72□□□□□ -2.29
SCN7AQ01118 HMGB1P36-201ENST00000487709 576 ntBASIC0.72□□□□□ -2.29
SCN7AQ01118 RNU11-2P-201ENST00000516898 142 ntBASIC0.72□□□□□ -2.29
SCN7AQ01118 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC0.72□□□□□ -2.29
SCN7AQ01118 AC092953.2-201ENST00000608000 699 ntBASIC0.72□□□□□ -2.29
SCN7AQ01118 AC006213.4-201ENST00000616184 634 ntBASIC0.72□□□□□ -2.29
SCN7AQ01118 AC005832.2-201ENST00000538921 1430 ntBASIC0.72□□□□□ -2.29
SCN7AQ01118 Y_RNA.458-201ENST00000384240 102 ntBASIC0.71□□□□□ -2.3
SCN7AQ01118 AL161788.1-201ENST00000441805 169 ntBASIC0.71□□□□□ -2.3
SCN7AQ01118 RAC1P7-201ENST00000445367 377 ntBASIC0.71□□□□□ -2.3
SCN7AQ01118 ARPC3P5-201ENST00000448802 534 ntBASIC0.71□□□□□ -2.3
SCN7AQ01118 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.71□□□□□ -2.3
SCN7AQ01118 AP001025.1-201ENST00000486139 332 ntBASIC0.71□□□□□ -2.3
SCN7AQ01118 AC099513.1-201ENST00000490423 301 ntBASIC0.71□□□□□ -2.3
SCN7AQ01118 RNA5SP395-201ENST00000516567 118 ntBASIC0.71□□□□□ -2.3
SCN7AQ01118 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.71□□□□□ -2.3
SCN7AQ01118 OR5B19P-201ENST00000531766 928 ntBASIC0.71□□□□□ -2.3
SCN7AQ01118 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.71□□□□□ -2.3
SCN7AQ01118 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC0.71□□□□□ -2.3
SCN7AQ01118 CYP4A27P-201ENST00000567218 190 ntBASIC0.71□□□□□ -2.3
SCN7AQ01118 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms