Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RNU6-203P-201ENST00000384038 104 ntBASIC1.53□□□□□ -2.16
TPM4P67936 AL133475.1-201ENST00000404414 305 ntBASIC1.53□□□□□ -2.16
TPM4P67936 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.53□□□□□ -2.16
TPM4P67936 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.53□□□□□ -2.16
TPM4P67936 MTND5P14-201ENST00000441481 1267 ntBASIC1.53□□□□□ -2.16
TPM4P67936 MTND1P31-201ENST00000449206 961 ntBASIC1.53□□□□□ -2.16
TPM4P67936 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.53□□□□□ -2.16
TPM4P67936 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.53□□□□□ -2.16
TPM4P67936 RNU6-1225P-201ENST00000516336 65 ntBASIC1.53□□□□□ -2.16
TPM4P67936 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.53□□□□□ -2.16
TPM4P67936 AC023825.1-201ENST00000566704 1030 ntBASIC1.53□□□□□ -2.16
TPM4P67936 MIR5708-201ENST00000579723 85 ntBASIC1.53□□□□□ -2.16
TPM4P67936 AC006338.1-201ENST00000618453 749 ntBASIC1.53□□□□□ -2.16
TPM4P67936 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.53□□□□□ -2.16
TPM4P67936 AC093875.1-201ENST00000623688 504 ntBASIC1.53□□□□□ -2.16
TPM4P67936 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.52□□□□□ -2.17
TPM4P67936 AC092447.10-201ENST00000620607 1652 ntBASIC1.52□□□□□ -2.17
TPM4P67936 RNU6-188P-201ENST00000364207 107 ntBASIC1.52□□□□□ -2.17
TPM4P67936 RNU6-609P-201ENST00000365459 107 ntBASIC1.52□□□□□ -2.17
TPM4P67936 RNU2-48P-201ENST00000410694 191 ntBASIC1.52□□□□□ -2.17
TPM4P67936 AC118469.1-201ENST00000442943 488 ntBASIC1.52□□□□□ -2.17
TPM4P67936 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.52□□□□□ -2.17
TPM4P67936 AC098862.1-201ENST00000504991 413 ntBASIC1.52□□□□□ -2.17
TPM4P67936 AC093012.1-202ENST00000549403 582 ntBASIC1.52□□□□□ -2.17
TPM4P67936 AC015720.1-201ENST00000565251 277 ntBASIC1.52□□□□□ -2.17
TPM4P67936 AC098483.2-201ENST00000603158 454 ntBASIC1.52□□□□□ -2.17
TPM4P67936 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.52□□□□□ -2.17
TPM4P67936 U6.99-201ENST00000637524 83 ntBASIC1.52□□□□□ -2.17
TPM4P67936 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
TPM4P67936 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.52□□□□□ -2.17
TPM4P67936 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
TPM4P67936 AC138393.1-203ENST00000327086 343 ntBASIC1.51□□□□□ -2.17
TPM4P67936 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
TPM4P67936 RNU6-60P-201ENST00000364792 103 ntBASIC1.51□□□□□ -2.17
TPM4P67936 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
TPM4P67936 RNU11-3P-201ENST00000391111 133 ntBASIC1.51□□□□□ -2.17
TPM4P67936 RNA5SP501-201ENST00000410990 112 ntBASIC1.51□□□□□ -2.17
TPM4P67936 AC068533.2-201ENST00000411872 306 ntBASIC1.51□□□□□ -2.17
TPM4P67936 RPL21P24-201ENST00000413752 448 ntBASIC1.51□□□□□ -2.17
TPM4P67936 AC015922.2-201ENST00000435593 184 ntBASIC1.51□□□□□ -2.17
TPM4P67936 AP000949.1-201ENST00000438328 629 ntBASIC1.51□□□□□ -2.17
TPM4P67936 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.51□□□□□ -2.17
TPM4P67936 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.51□□□□□ -2.17
TPM4P67936 AC104563.1-201ENST00000476147 376 ntBASIC1.51□□□□□ -2.17
TPM4P67936 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.51□□□□□ -2.17
TPM4P67936 TPT1P8-201ENST00000510120 555 ntBASIC1.51□□□□□ -2.17
TPM4P67936 RNU6-586P-201ENST00000517265 104 ntBASIC1.51□□□□□ -2.17
TPM4P67936 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.5□□□□□ -2.17
TPM4P67936 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.5□□□□□ -2.17
TPM4P67936 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
TPM4P67936 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.5□□□□□ -2.17
TPM4P67936 MIR1262-201ENST00000408276 93 ntBASIC1.5□□□□□ -2.17
TPM4P67936 SDAD1P3-201ENST00000427380 333 ntBASIC1.5□□□□□ -2.17
TPM4P67936 BRK1P2-201ENST00000442875 223 ntBASIC1.5□□□□□ -2.17
TPM4P67936 AC023194.1-201ENST00000493084 308 ntBASIC1.5□□□□□ -2.17
TPM4P67936 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.5□□□□□ -2.17
TPM4P67936 MTND4P2-201ENST00000507767 1203 ntBASIC1.5□□□□□ -2.17
TPM4P67936 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.5□□□□□ -2.17
TPM4P67936 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.5□□□□□ -2.17
TPM4P67936 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.5□□□□□ -2.17
TPM4P67936 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.5□□□□□ -2.17
TPM4P67936 RPL30P11-203ENST00000598995 310 ntBASIC1.5□□□□□ -2.17
TPM4P67936 AL670379.10-201ENST00000604330 253 ntBASIC1.5□□□□□ -2.17
TPM4P67936 AL670379.9-201ENST00000605428 253 ntBASIC1.5□□□□□ -2.17
TPM4P67936 AC069545.1-201ENST00000605671 358 ntBASIC1.5□□□□□ -2.17
TPM4P67936 AC107952.2-201ENST00000606048 486 ntBASIC1.5□□□□□ -2.17
TPM4P67936 AC021755.4-201ENST00000616620 456 ntBASIC1.5□□□□□ -2.17
TPM4P67936 AC078880.5-201ENST00000617845 421 ntBASIC1.5□□□□□ -2.17
TPM4P67936 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.5□□□□□ -2.17
TPM4P67936 AP005901.5-201ENST00000545779 1796 ntBASIC1.49□□□□□ -2.17
TPM4P67936 AC091812.1-201ENST00000432235 1948 ntBASIC1.49□□□□□ -2.17
TPM4P67936 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.49□□□□□ -2.17
TPM4P67936 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC1.49□□□□□ -2.17
TPM4P67936 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.49□□□□□ -2.17
TPM4P67936 AC104651.1-201ENST00000427559 735 ntBASIC1.49□□□□□ -2.17
TPM4P67936 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.49□□□□□ -2.17
TPM4P67936 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.49□□□□□ -2.17
TPM4P67936 MTCO2P20-201ENST00000437339 673 ntBASIC1.49□□□□□ -2.17
TPM4P67936 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.49□□□□□ -2.17
TPM4P67936 AL096829.2-201ENST00000446582 742 ntBASIC1.49□□□□□ -2.17
TPM4P67936 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.49□□□□□ -2.17
TPM4P67936 AC245102.2-201ENST00000448956 180 ntBASIC1.49□□□□□ -2.17
TPM4P67936 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.49□□□□□ -2.17
TPM4P67936 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.49□□□□□ -2.17
TPM4P67936 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.49□□□□□ -2.17
TPM4P67936 AC093801.2-201ENST00000503966 1050 ntBASIC1.49□□□□□ -2.17
TPM4P67936 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.49□□□□□ -2.17
TPM4P67936 AC135279.1-201ENST00000543493 504 ntBASIC1.49□□□□□ -2.17
TPM4P67936 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.49□□□□□ -2.17
TPM4P67936 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.49□□□□□ -2.17
TPM4P67936 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.49□□□□□ -2.17
TPM4P67936 VN1R87P-201ENST00000596706 487 ntBASIC1.49□□□□□ -2.17
TPM4P67936 AC010900.2-201ENST00000604508 210 ntBASIC1.49□□□□□ -2.17
TPM4P67936 MIR7843-201ENST00000622274 79 ntBASIC1.49□□□□□ -2.17
TPM4P67936 AL356094.1-201ENST00000624663 1212 ntBASIC1.49□□□□□ -2.17
TPM4P67936 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.49□□□□□ -2.17
TPM4P67936 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TPM4P67936 ZNF680P1-201ENST00000436625 1469 ntBASIC1.49□□□□□ -2.17
TPM4P67936 AC002543.1-201ENST00000299783 1954 ntBASIC1.48□□□□□ -2.17
TPM4P67936 AL161722.3-201ENST00000605789 2983 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms