Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC0.86□□□□□ -2.27
LSM3P62310 ZKSCAN7P1-201ENST00000543668 673 ntBASIC0.86□□□□□ -2.27
LSM3P62310 AC090115.3-201ENST00000553218 849 ntBASIC0.86□□□□□ -2.27
LSM3P62310 PSMA3P-201ENST00000555485 635 ntBASIC0.86□□□□□ -2.27
LSM3P62310 LINC00557-201ENST00000563184 1279 ntBASIC0.86□□□□□ -2.27
LSM3P62310 AC005668.1-201ENST00000571142 476 ntBASIC0.86□□□□□ -2.27
LSM3P62310 AC090615.1-201ENST00000577519 154 ntBASIC0.86□□□□□ -2.27
LSM3P62310 AP001542.2-201ENST00000593141 364 ntBASIC0.86□□□□□ -2.27
LSM3P62310 AC004908.3-201ENST00000610248 625 ntBASIC0.86□□□□□ -2.27
LSM3P62310 U1.36-201ENST00000620684 176 ntBASIC0.86□□□□□ -2.27
LSM3P62310 AC138627.2-201ENST00000624202 601 ntBASIC0.86□□□□□ -2.27
LSM3P62310 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.86□□□□□ -2.27
LSM3P62310 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.86□□□□□ -2.27
LSM3P62310 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
LSM3P62310 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
LSM3P62310 RNU6-661P-201ENST00000362409 107 ntBASIC0.85□□□□□ -2.27
LSM3P62310 RNU6-1078P-201ENST00000364522 103 ntBASIC0.85□□□□□ -2.27
LSM3P62310 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC0.85□□□□□ -2.27
LSM3P62310 RNU6-481P-201ENST00000384194 107 ntBASIC0.85□□□□□ -2.27
LSM3P62310 AL021407.1-201ENST00000404531 386 ntBASIC0.85□□□□□ -2.27
LSM3P62310 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.85□□□□□ -2.27
LSM3P62310 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.85□□□□□ -2.27
LSM3P62310 RPL36AP53-201ENST00000432891 316 ntBASIC0.85□□□□□ -2.27
LSM3P62310 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.85□□□□□ -2.27
LSM3P62310 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.85□□□□□ -2.27
LSM3P62310 snoU13.9-201ENST00000458927 103 ntBASIC0.85□□□□□ -2.27
LSM3P62310 AC010409.1-201ENST00000487382 476 ntBASIC0.85□□□□□ -2.27
LSM3P62310 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.85□□□□□ -2.27
LSM3P62310 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
LSM3P62310 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.85□□□□□ -2.27
LSM3P62310 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC0.85□□□□□ -2.27
LSM3P62310 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC0.85□□□□□ -2.27
LSM3P62310 SNORA48.9-201ENST00000516419 162 ntBASIC0.85□□□□□ -2.27
LSM3P62310 RNU6-902P-201ENST00000517212 91 ntBASIC0.85□□□□□ -2.27
LSM3P62310 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.85□□□□□ -2.27
LSM3P62310 AC022861.1-201ENST00000522981 663 ntBASIC0.85□□□□□ -2.27
LSM3P62310 AP003392.2-201ENST00000527269 208 ntBASIC0.85□□□□□ -2.27
LSM3P62310 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.85□□□□□ -2.27
LSM3P62310 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC0.85□□□□□ -2.27
LSM3P62310 AC002400.1-201ENST00000569310 726 ntBASIC0.85□□□□□ -2.27
LSM3P62310 ADAM3B-201ENST00000569937 840 ntBASIC0.85□□□□□ -2.27
LSM3P62310 MIR4422-201ENST00000581938 83 ntBASIC0.85□□□□□ -2.27
LSM3P62310 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC0.85□□□□□ -2.27
LSM3P62310 BBIP1P1-201ENST00000602999 279 ntBASIC0.85□□□□□ -2.27
LSM3P62310 DPPA3P3-201ENST00000603842 430 ntBASIC0.85□□□□□ -2.27
LSM3P62310 AL161798.1-201ENST00000604630 131 ntBASIC0.85□□□□□ -2.27
LSM3P62310 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC0.85□□□□□ -2.27
LSM3P62310 AC008759.3-201ENST00000613300 508 ntBASIC0.85□□□□□ -2.27
LSM3P62310 AC099842.1-201ENST00000619919 596 ntBASIC0.85□□□□□ -2.27
LSM3P62310 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
LSM3P62310 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
LSM3P62310 NACAP2-201ENST00000318548 624 ntBASIC0.84□□□□□ -2.27
LSM3P62310 RNU6-28P-201ENST00000362378 107 ntBASIC0.84□□□□□ -2.27
LSM3P62310 RNU1-58P-201ENST00000362413 163 ntBASIC0.84□□□□□ -2.27
LSM3P62310 RNA5SP327-201ENST00000362494 101 ntBASIC0.84□□□□□ -2.27
LSM3P62310 RNU6-1167P-201ENST00000363227 94 ntBASIC0.84□□□□□ -2.27
LSM3P62310 RNU6-1066P-201ENST00000363573 105 ntBASIC0.84□□□□□ -2.27
LSM3P62310 RNU4-38P-201ENST00000364472 129 ntBASIC0.84□□□□□ -2.27
LSM3P62310 RNU6-343P-201ENST00000364709 104 ntBASIC0.84□□□□□ -2.27
LSM3P62310 SUGT1P1-201ENST00000379514 476 ntBASIC0.84□□□□□ -2.27
LSM3P62310 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
LSM3P62310 AC008267.5-201ENST00000424928 265 ntBASIC0.84□□□□□ -2.27
LSM3P62310 AC017099.1-201ENST00000448261 1028 ntBASIC0.84□□□□□ -2.27
LSM3P62310 AC079448.1-201ENST00000449377 373 ntBASIC0.84□□□□□ -2.27
LSM3P62310 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC0.84□□□□□ -2.27
LSM3P62310 RPL21P47-201ENST00000483696 477 ntBASIC0.84□□□□□ -2.27
LSM3P62310 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.84□□□□□ -2.27
LSM3P62310 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC0.84□□□□□ -2.27
LSM3P62310 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.84□□□□□ -2.27
LSM3P62310 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.84□□□□□ -2.27
LSM3P62310 AC010486.1-201ENST00000511793 424 ntBASIC0.84□□□□□ -2.27
LSM3P62310 RNU6-586P-201ENST00000517265 104 ntBASIC0.84□□□□□ -2.27
LSM3P62310 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
LSM3P62310 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.84□□□□□ -2.27
LSM3P62310 AP000763.2-201ENST00000540641 163 ntBASIC0.84□□□□□ -2.27
LSM3P62310 AC093249.1-201ENST00000567049 203 ntBASIC0.84□□□□□ -2.27
LSM3P62310 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.84□□□□□ -2.27
LSM3P62310 RPL30P11-203ENST00000598995 310 ntBASIC0.84□□□□□ -2.27
LSM3P62310 AC013244.2-201ENST00000603396 103 ntBASIC0.84□□□□□ -2.27
LSM3P62310 AL450270.1-201ENST00000606160 391 ntBASIC0.84□□□□□ -2.27
LSM3P62310 AC116312.1-201ENST00000606841 314 ntBASIC0.84□□□□□ -2.27
LSM3P62310 AC034229.4-201ENST00000607861 441 ntBASIC0.84□□□□□ -2.27
LSM3P62310 AC019226.1-201ENST00000625666 515 ntBASIC0.84□□□□□ -2.27
LSM3P62310 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
LSM3P62310 SNRPEP3-201ENST00000338402 276 ntBASIC0.83□□□□□ -2.28
LSM3P62310 SNORA70B-201ENST00000384210 135 ntBASIC0.83□□□□□ -2.28
LSM3P62310 MIR1302-8-201ENST00000408342 128 ntBASIC0.83□□□□□ -2.28
LSM3P62310 GXYLT1P1-201ENST00000446657 490 ntBASIC0.83□□□□□ -2.28
LSM3P62310 RNU6-775P-201ENST00000459318 96 ntBASIC0.83□□□□□ -2.28
LSM3P62310 RPS26P55-201ENST00000471178 356 ntBASIC0.83□□□□□ -2.28
LSM3P62310 AC021382.1-201ENST00000483523 359 ntBASIC0.83□□□□□ -2.28
LSM3P62310 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.83□□□□□ -2.28
LSM3P62310 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.83□□□□□ -2.28
LSM3P62310 PTP4A1P4-201ENST00000512479 322 ntBASIC0.83□□□□□ -2.28
LSM3P62310 ZNF971P-201ENST00000562068 1249 ntBASIC0.83□□□□□ -2.28
LSM3P62310 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.83□□□□□ -2.28
LSM3P62310 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.83□□□□□ -2.28
LSM3P62310 AC098826.3-201ENST00000603823 466 ntBASIC0.83□□□□□ -2.28
LSM3P62310 AL022345.1-201ENST00000607292 135 ntBASIC0.83□□□□□ -2.28
LSM3P62310 Z82243.1-201ENST00000609432 473 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 154.1 ms