Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AC012065.4-201ENST00000602445 679 ntBASIC2.47□□□□□ -2.01
SRP54P61011 AL021997.1-201ENST00000605757 193 ntBASIC2.47□□□□□ -2.01
SRP54P61011 MIR15A-201ENST00000607334 83 ntBASIC2.47□□□□□ -2.01
SRP54P61011 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.47□□□□□ -2.01
SRP54P61011 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.47□□□□□ -2.01
SRP54P61011 AL109809.4-201ENST00000603520 2185 ntBASIC2.47□□□□□ -2.01
SRP54P61011 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SRP54P61011 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
SRP54P61011 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.46□□□□□ -2.02
SRP54P61011 AL139276.1-201ENST00000311910 1001 ntBASIC2.46□□□□□ -2.02
SRP54P61011 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SRP54P61011 MIR518C-201ENST00000384822 101 ntBASIC2.46□□□□□ -2.02
SRP54P61011 RNA5SP181-201ENST00000410246 98 ntBASIC2.46□□□□□ -2.02
SRP54P61011 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.46□□□□□ -2.02
SRP54P61011 ELOCP4-201ENST00000420090 333 ntBASIC2.46□□□□□ -2.02
SRP54P61011 MTCO3P30-201ENST00000426425 670 ntBASIC2.46□□□□□ -2.02
SRP54P61011 FABP5P14-201ENST00000437273 393 ntBASIC2.46□□□□□ -2.02
SRP54P61011 AL133217.1-201ENST00000450980 425 ntBASIC2.46□□□□□ -2.02
SRP54P61011 RNU7-26P-201ENST00000458980 63 ntBASIC2.46□□□□□ -2.02
SRP54P61011 RPL23AP45-201ENST00000476406 468 ntBASIC2.46□□□□□ -2.02
SRP54P61011 AC023194.1-201ENST00000493084 308 ntBASIC2.46□□□□□ -2.02
SRP54P61011 RNA5SP112-201ENST00000515937 99 ntBASIC2.46□□□□□ -2.02
SRP54P61011 RNU6-581P-201ENST00000516214 105 ntBASIC2.46□□□□□ -2.02
SRP54P61011 Y_RNA.689-201ENST00000516589 107 ntBASIC2.46□□□□□ -2.02
SRP54P61011 IGLV3-17-201ENST00000519099 244 ntBASIC2.46□□□□□ -2.02
SRP54P61011 CKS1BP7-201ENST00000522230 235 ntBASIC2.46□□□□□ -2.02
SRP54P61011 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.46□□□□□ -2.02
SRP54P61011 AC010186.2-204ENST00000537668 439 ntBASIC2.46□□□□□ -2.02
SRP54P61011 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SRP54P61011 AL512310.1-201ENST00000548639 172 ntBASIC2.46□□□□□ -2.02
SRP54P61011 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.46□□□□□ -2.02
SRP54P61011 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.46□□□□□ -2.02
SRP54P61011 AL359547.2-201ENST00000615810 418 ntBASIC2.46□□□□□ -2.02
SRP54P61011 AL590808.1-201ENST00000618696 141 ntBASIC2.46□□□□□ -2.02
SRP54P61011 AL603755.1-201ENST00000619504 163 ntBASIC2.46□□□□□ -2.02
SRP54P61011 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.46□□□□□ -2.02
SRP54P61011 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
SRP54P61011 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SRP54P61011 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SRP54P61011 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SRP54P61011 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.45□□□□□ -2.02
SRP54P61011 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
SRP54P61011 RNU6-486P-201ENST00000363116 107 ntBASIC2.45□□□□□ -2.02
SRP54P61011 RNU6-1280P-201ENST00000365211 107 ntBASIC2.45□□□□□ -2.02
SRP54P61011 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.45□□□□□ -2.02
SRP54P61011 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.45□□□□□ -2.02
SRP54P61011 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.45□□□□□ -2.02
SRP54P61011 AC007283.2-201ENST00000424739 197 ntBASIC2.45□□□□□ -2.02
SRP54P61011 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SRP54P61011 AC007560.1-201ENST00000426912 237 ntBASIC2.45□□□□□ -2.02
SRP54P61011 MED13P1-201ENST00000428342 171 ntBASIC2.45□□□□□ -2.02
SRP54P61011 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.45□□□□□ -2.02
SRP54P61011 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.45□□□□□ -2.02
SRP54P61011 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.45□□□□□ -2.02
SRP54P61011 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.45□□□□□ -2.02
SRP54P61011 ART2BP-201ENST00000453501 499 ntBASIC2.45□□□□□ -2.02
SRP54P61011 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SRP54P61011 BTF3P15-201ENST00000455606 336 ntBASIC2.45□□□□□ -2.02
SRP54P61011 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.45□□□□□ -2.02
SRP54P61011 AC116655.1-201ENST00000508324 901 ntBASIC2.45□□□□□ -2.02
SRP54P61011 OR5B19P-201ENST00000531766 928 ntBASIC2.45□□□□□ -2.02
SRP54P61011 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.45□□□□□ -2.02
SRP54P61011 MIR5694-201ENST00000581190 76 ntBASIC2.45□□□□□ -2.02
SRP54P61011 AC009977.1-201ENST00000586015 570 ntBASIC2.45□□□□□ -2.02
SRP54P61011 NRBF2P1-201ENST00000587407 859 ntBASIC2.45□□□□□ -2.02
SRP54P61011 AL022154.1-201ENST00000604698 785 ntBASIC2.45□□□□□ -2.02
SRP54P61011 Z99289.3-201ENST00000605586 594 ntBASIC2.45□□□□□ -2.02
SRP54P61011 HMGB1P24-202ENST00000615653 685 ntBASIC2.45□□□□□ -2.02
SRP54P61011 AC108479.2-201ENST00000617314 601 ntBASIC2.45□□□□□ -2.02
SRP54P61011 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
SRP54P61011 AC091304.6-201ENST00000619761 202 ntBASIC2.45□□□□□ -2.02
SRP54P61011 PISRT1-201ENST00000626175 531 ntBASIC2.45□□□□□ -2.02
SRP54P61011 AC025048.6-202ENST00000627667 438 ntBASIC2.45□□□□□ -2.02
SRP54P61011 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SRP54P61011 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SRP54P61011 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.44□□□□□ -2.02
SRP54P61011 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.44□□□□□ -2.02
SRP54P61011 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.44□□□□□ -2.02
SRP54P61011 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SRP54P61011 RNU6-39P-201ENST00000384344 107 ntBASIC2.44□□□□□ -2.02
SRP54P61011 RNU6-166P-201ENST00000384371 107 ntBASIC2.44□□□□□ -2.02
SRP54P61011 MIR558-201ENST00000384920 94 ntBASIC2.44□□□□□ -2.02
SRP54P61011 MIR518D-201ENST00000385014 87 ntBASIC2.44□□□□□ -2.02
SRP54P61011 RPS3AP36-201ENST00000398190 775 ntBASIC2.44□□□□□ -2.02
SRP54P61011 AL359511.1-201ENST00000402970 211 ntBASIC2.44□□□□□ -2.02
SRP54P61011 U6atac.2-201ENST00000408644 118 ntBASIC2.44□□□□□ -2.02
SRP54P61011 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.44□□□□□ -2.02
SRP54P61011 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.44□□□□□ -2.02
SRP54P61011 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.44□□□□□ -2.02
SRP54P61011 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.44□□□□□ -2.02
SRP54P61011 BX276092.3-201ENST00000424182 230 ntBASIC2.44□□□□□ -2.02
SRP54P61011 FABP5P13-201ENST00000452144 328 ntBASIC2.44□□□□□ -2.02
SRP54P61011 AP001324.2-201ENST00000461163 319 ntBASIC2.44□□□□□ -2.02
SRP54P61011 TRBV12-1-201ENST00000479785 344 ntBASIC2.44□□□□□ -2.02
SRP54P61011 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.44□□□□□ -2.02
SRP54P61011 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.44□□□□□ -2.02
SRP54P61011 ACA59.2-201ENST00000517061 156 ntBASIC2.44□□□□□ -2.02
SRP54P61011 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.44□□□□□ -2.02
SRP54P61011 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.44□□□□□ -2.02
SRP54P61011 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms