Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 HMGN2P3-201ENST00000433603 273 ntBASIC1.49□□□□□ -2.17
ACTBP60709 HMGN2P5-201ENST00000436882 273 ntBASIC1.49□□□□□ -2.17
ACTBP60709 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.49□□□□□ -2.17
ACTBP60709 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.49□□□□□ -2.17
ACTBP60709 AP000542.1-201ENST00000448473 371 ntBASIC1.49□□□□□ -2.17
ACTBP60709 KATNBL1P6-201ENST00000453433 915 ntBASIC1.49□□□□□ -2.17
ACTBP60709 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.49□□□□□ -2.17
ACTBP60709 AC096745.1-201ENST00000509945 370 ntBASIC1.49□□□□□ -2.17
ACTBP60709 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.49□□□□□ -2.17
ACTBP60709 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.49□□□□□ -2.17
ACTBP60709 AC022254.1-201ENST00000567857 235 ntBASIC1.49□□□□□ -2.17
ACTBP60709 MTND4LP25-201ENST00000570218 163 ntBASIC1.49□□□□□ -2.17
ACTBP60709 RPL21P136-201ENST00000605378 396 ntBASIC1.49□□□□□ -2.17
ACTBP60709 AC103710.2-201ENST00000609912 942 ntBASIC1.49□□□□□ -2.17
ACTBP60709 AC022202.1-201ENST00000613515 211 ntBASIC1.49□□□□□ -2.17
ACTBP60709 AC108479.2-201ENST00000617314 601 ntBASIC1.49□□□□□ -2.17
ACTBP60709 MIR6134-201ENST00000617606 109 ntBASIC1.49□□□□□ -2.17
ACTBP60709 PCMTD1P7-201ENST00000634506 357 ntBASIC1.49□□□□□ -2.17
ACTBP60709 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
ACTBP60709 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
ACTBP60709 MIR126-201ENST00000362291 85 ntBASIC1.48□□□□□ -2.17
ACTBP60709 MIR29C-201ENST00000385231 88 ntBASIC1.48□□□□□ -2.17
ACTBP60709 CISD1P1-201ENST00000393907 327 ntBASIC1.48□□□□□ -2.17
ACTBP60709 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.48□□□□□ -2.17
ACTBP60709 OR51A5P-201ENST00000415429 942 ntBASIC1.48□□□□□ -2.17
ACTBP60709 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.48□□□□□ -2.17
ACTBP60709 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.48□□□□□ -2.17
ACTBP60709 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.48□□□□□ -2.17
ACTBP60709 TOMM20P4-201ENST00000427861 435 ntBASIC1.48□□□□□ -2.17
ACTBP60709 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.48□□□□□ -2.17
ACTBP60709 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.48□□□□□ -2.17
ACTBP60709 ELOCP30-201ENST00000447108 299 ntBASIC1.48□□□□□ -2.17
ACTBP60709 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.48□□□□□ -2.17
ACTBP60709 MTCO1P27-201ENST00000448269 226 ntBASIC1.48□□□□□ -2.17
ACTBP60709 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.48□□□□□ -2.17
ACTBP60709 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.48□□□□□ -2.17
ACTBP60709 OR6C5P-201ENST00000452388 923 ntBASIC1.48□□□□□ -2.17
ACTBP60709 AL137159.1-201ENST00000452808 512 ntBASIC1.48□□□□□ -2.17
ACTBP60709 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.48□□□□□ -2.17
ACTBP60709 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.48□□□□□ -2.17
ACTBP60709 AC139453.3-201ENST00000493276 369 ntBASIC1.48□□□□□ -2.17
ACTBP60709 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.48□□□□□ -2.17
ACTBP60709 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.48□□□□□ -2.17
ACTBP60709 FAM206BP-201ENST00000510179 541 ntBASIC1.48□□□□□ -2.17
ACTBP60709 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.48□□□□□ -2.17
ACTBP60709 RNU6-1183P-201ENST00000517054 60 ntBASIC1.48□□□□□ -2.17
ACTBP60709 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
ACTBP60709 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
ACTBP60709 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.48□□□□□ -2.17
ACTBP60709 NDUFA5P6-201ENST00000542110 379 ntBASIC1.48□□□□□ -2.17
ACTBP60709 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.48□□□□□ -2.17
ACTBP60709 AC110588.1-201ENST00000559699 137 ntBASIC1.48□□□□□ -2.17
ACTBP60709 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.48□□□□□ -2.17
ACTBP60709 AC104581.2-201ENST00000572227 430 ntBASIC1.48□□□□□ -2.17
ACTBP60709 MIR4293-201ENST00000584305 78 ntBASIC1.48□□□□□ -2.17
ACTBP60709 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.48□□□□□ -2.17
ACTBP60709 AL121895.2-201ENST00000619558 447 ntBASIC1.48□□□□□ -2.17
ACTBP60709 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.48□□□□□ -2.17
ACTBP60709 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
ACTBP60709 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
ACTBP60709 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
ACTBP60709 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.47□□□□□ -2.17
ACTBP60709 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.47□□□□□ -2.17
ACTBP60709 RNU6-853P-201ENST00000364306 107 ntBASIC1.47□□□□□ -2.17
ACTBP60709 RNU6-512P-201ENST00000364438 103 ntBASIC1.47□□□□□ -2.17
ACTBP60709 Y_RNA.311-201ENST00000365068 96 ntBASIC1.47□□□□□ -2.17
ACTBP60709 RNA5SP363-201ENST00000365072 115 ntBASIC1.47□□□□□ -2.17
ACTBP60709 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
ACTBP60709 RNA5SP465-201ENST00000391195 109 ntBASIC1.47□□□□□ -2.17
ACTBP60709 RNU6-1140P-201ENST00000410517 106 ntBASIC1.47□□□□□ -2.17
ACTBP60709 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.47□□□□□ -2.17
ACTBP60709 AL353706.1-201ENST00000436728 494 ntBASIC1.47□□□□□ -2.17
ACTBP60709 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.47□□□□□ -2.17
ACTBP60709 BRK1P2-201ENST00000442875 223 ntBASIC1.47□□□□□ -2.17
ACTBP60709 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
ACTBP60709 AC092001.1-201ENST00000453012 261 ntBASIC1.47□□□□□ -2.17
ACTBP60709 AC112492.4-201ENST00000456549 352 ntBASIC1.47□□□□□ -2.17
ACTBP60709 RNU7-59P-201ENST00000459101 61 ntBASIC1.47□□□□□ -2.17
ACTBP60709 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.47□□□□□ -2.17
ACTBP60709 AC018868.1-201ENST00000491307 315 ntBASIC1.47□□□□□ -2.17
ACTBP60709 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.47□□□□□ -2.17
ACTBP60709 RPF2P2-201ENST00000504693 896 ntBASIC1.47□□□□□ -2.17
ACTBP60709 AC021146.8-201ENST00000507455 733 ntBASIC1.47□□□□□ -2.17
ACTBP60709 RNA5SP182-201ENST00000516064 82 ntBASIC1.47□□□□□ -2.17
ACTBP60709 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
ACTBP60709 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.47□□□□□ -2.17
ACTBP60709 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.47□□□□□ -2.17
ACTBP60709 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.47□□□□□ -2.17
ACTBP60709 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.47□□□□□ -2.17
ACTBP60709 AC068620.3-201ENST00000602749 560 ntBASIC1.47□□□□□ -2.17
ACTBP60709 AL158211.2-201ENST00000607282 395 ntBASIC1.47□□□□□ -2.17
ACTBP60709 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.47□□□□□ -2.17
ACTBP60709 U1.36-201ENST00000620684 176 ntBASIC1.47□□□□□ -2.17
ACTBP60709 AC017037.3-201ENST00000625016 472 ntBASIC1.47□□□□□ -2.17
ACTBP60709 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.47□□□□□ -2.17
ACTBP60709 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.47□□□□□ -2.17
ACTBP60709 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
ACTBP60709 MIR583-201ENST00000384846 75 ntBASIC1.46□□□□□ -2.18
ACTBP60709 MIR1289-2-201ENST00000408360 111 ntBASIC1.46□□□□□ -2.18
ACTBP60709 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms