Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC025048.6-202ENST00000627667 438 ntBASIC2.58□□□□□ -2
VCPP55072 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.58□□□□□ -2
VCPP55072 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.58□□□□□ -2
VCPP55072 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
VCPP55072 AL137003.2-201ENST00000606924 2538 ntBASIC2.58□□□□□ -2
VCPP55072 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
VCPP55072 RNU6-511P-201ENST00000363496 107 ntBASIC2.57□□□□□ -2
VCPP55072 Y_RNA.508-201ENST00000384502 114 ntBASIC2.57□□□□□ -2
VCPP55072 RNU6-14P-201ENST00000384630 106 ntBASIC2.57□□□□□ -2
VCPP55072 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.57□□□□□ -2
VCPP55072 AL139397.2-201ENST00000404529 772 ntBASIC2.57□□□□□ -2
VCPP55072 RNU2-49P-201ENST00000410666 184 ntBASIC2.57□□□□□ -2
VCPP55072 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.57□□□□□ -2
VCPP55072 ZNF90P2-204ENST00000419323 1075 ntBASIC2.57□□□□□ -2
VCPP55072 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.57□□□□□ -2
VCPP55072 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.57□□□□□ -2
VCPP55072 AC124916.1-201ENST00000444020 547 ntBASIC2.57□□□□□ -2
VCPP55072 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.57□□□□□ -2
VCPP55072 TAF9P1-201ENST00000445421 515 ntBASIC2.57□□□□□ -2
VCPP55072 RPS27AP8-201ENST00000452665 445 ntBASIC2.57□□□□□ -2
VCPP55072 TAF9P2-201ENST00000454958 515 ntBASIC2.57□□□□□ -2
VCPP55072 RPL23AP45-201ENST00000476406 468 ntBASIC2.57□□□□□ -2
VCPP55072 RPS29P20-201ENST00000489592 171 ntBASIC2.57□□□□□ -2
VCPP55072 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.57□□□□□ -2
VCPP55072 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.57□□□□□ -2
VCPP55072 NDUFB4P2-201ENST00000509515 391 ntBASIC2.57□□□□□ -2
VCPP55072 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.57□□□□□ -2
VCPP55072 AC060788.1-201ENST00000521318 469 ntBASIC2.57□□□□□ -2
VCPP55072 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.57□□□□□ -2
VCPP55072 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.57□□□□□ -2
VCPP55072 ARL2BPP2-201ENST00000550907 489 ntBASIC2.57□□□□□ -2
VCPP55072 RPL21P5-201ENST00000554662 472 ntBASIC2.57□□□□□ -2
VCPP55072 HMGN1P30-201ENST00000589286 268 ntBASIC2.57□□□□□ -2
VCPP55072 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.57□□□□□ -2
VCPP55072 FTX_3.1-201ENST00000610451 147 ntBASIC2.57□□□□□ -2
VCPP55072 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.57□□□□□ -2
VCPP55072 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.57□□□□□ -2
VCPP55072 AC022079.1-201ENST00000621546 602 ntBASIC2.57□□□□□ -2
VCPP55072 AC099654.13-201ENST00000639774 207 ntBASIC2.57□□□□□ -2
VCPP55072 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.57□□□□□ -2
VCPP55072 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.56□□□□□ -2
VCPP55072 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.56□□□□□ -2
VCPP55072 RNU6-701P-201ENST00000384059 107 ntBASIC2.56□□□□□ -2
VCPP55072 MRPL42P2-201ENST00000403169 426 ntBASIC2.56□□□□□ -2
VCPP55072 RNU2-36P-201ENST00000410361 191 ntBASIC2.56□□□□□ -2
VCPP55072 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.56□□□□□ -2
VCPP55072 RAC1P6-201ENST00000423911 575 ntBASIC2.56□□□□□ -2
VCPP55072 MTCO3P30-201ENST00000426425 670 ntBASIC2.56□□□□□ -2
VCPP55072 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.56□□□□□ -2
VCPP55072 AC010153.1-201ENST00000432862 727 ntBASIC2.56□□□□□ -2
VCPP55072 RPS15AP5-201ENST00000436276 388 ntBASIC2.56□□□□□ -2
VCPP55072 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.56□□□□□ -2
VCPP55072 RPL12P25-201ENST00000455592 494 ntBASIC2.56□□□□□ -2
VCPP55072 SNRPFP4-201ENST00000456366 242 ntBASIC2.56□□□□□ -2
VCPP55072 RPL26P9-201ENST00000457466 433 ntBASIC2.56□□□□□ -2
VCPP55072 SNORD97-201ENST00000459187 142 ntBASIC2.56□□□□□ -2
VCPP55072 AC073901.1-201ENST00000462471 408 ntBASIC2.56□□□□□ -2
VCPP55072 RPL9P6-201ENST00000492764 598 ntBASIC2.56□□□□□ -2
VCPP55072 AC010587.1-201ENST00000505809 469 ntBASIC2.56□□□□□ -2
VCPP55072 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.56□□□□□ -2
VCPP55072 AC108729.3-201ENST00000513484 108 ntBASIC2.56□□□□□ -2
VCPP55072 SNORA31.3-201ENST00000516029 96 ntBASIC2.56□□□□□ -2
VCPP55072 RNA5SP281-201ENST00000516504 135 ntBASIC2.56□□□□□ -2
VCPP55072 RNA5SP290-201ENST00000517133 127 ntBASIC2.56□□□□□ -2
VCPP55072 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.56□□□□□ -2
VCPP55072 MTND2P38-201ENST00000522536 667 ntBASIC2.56□□□□□ -2
VCPP55072 AP006587.4-201ENST00000526053 529 ntBASIC2.56□□□□□ -2
VCPP55072 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.56□□□□□ -2
VCPP55072 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.56□□□□□ -2
VCPP55072 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.56□□□□□ -2
VCPP55072 MIR3616-201ENST00000584070 92 ntBASIC2.56□□□□□ -2
VCPP55072 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.56□□□□□ -2
VCPP55072 AC135507.1-201ENST00000607214 561 ntBASIC2.56□□□□□ -2
VCPP55072 AC110994.2-201ENST00000635481 492 ntBASIC2.56□□□□□ -2
VCPP55072 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.56□□□□□ -2
VCPP55072 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.56□□□□□ -2
VCPP55072 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
VCPP55072 RNU6-1167P-201ENST00000363227 94 ntBASIC2.55□□□□□ -2
VCPP55072 RNU6-884P-201ENST00000363889 107 ntBASIC2.55□□□□□ -2
VCPP55072 Y_RNA.245-201ENST00000364493 95 ntBASIC2.55□□□□□ -2
VCPP55072 RNU1-91P-201ENST00000364746 163 ntBASIC2.55□□□□□ -2
VCPP55072 BTF3P7-201ENST00000407097 488 ntBASIC2.55□□□□□ -2
VCPP55072 SEPT2P1-201ENST00000419651 180 ntBASIC2.55□□□□□ -2
VCPP55072 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.55□□□□□ -2
VCPP55072 AL589872.1-201ENST00000426602 288 ntBASIC2.55□□□□□ -2
VCPP55072 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.55□□□□□ -2
VCPP55072 AC098826.1-201ENST00000433943 471 ntBASIC2.55□□□□□ -2
VCPP55072 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.55□□□□□ -2
VCPP55072 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.55□□□□□ -2
VCPP55072 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.55□□□□□ -2
VCPP55072 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.55□□□□□ -2
VCPP55072 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.55□□□□□ -2
VCPP55072 SNRPGP9-201ENST00000456025 225 ntBASIC2.55□□□□□ -2
VCPP55072 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
VCPP55072 AC010486.3-201ENST00000511602 785 ntBASIC2.55□□□□□ -2
VCPP55072 RNU6-1053P-201ENST00000515930 101 ntBASIC2.55□□□□□ -2
VCPP55072 RNU2-10P-201ENST00000516375 211 ntBASIC2.55□□□□□ -2
VCPP55072 RNA5SP337-201ENST00000517007 109 ntBASIC2.55□□□□□ -2
VCPP55072 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.55□□□□□ -2
VCPP55072 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms