Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.29□□□□□ -1.88
PMS2P54278 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.29□□□□□ -1.88
PMS2P54278 AC093151.1-201ENST00000427711 313 ntBASIC3.29□□□□□ -1.88
PMS2P54278 ERLEC1P1-201ENST00000433806 578 ntBASIC3.29□□□□□ -1.88
PMS2P54278 AL512844.2-201ENST00000433990 593 ntBASIC3.29□□□□□ -1.88
PMS2P54278 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.29□□□□□ -1.88
PMS2P54278 RNU6-333P-201ENST00000459117 107 ntBASIC3.29□□□□□ -1.88
PMS2P54278 HMGN2P26-201ENST00000463169 339 ntBASIC3.29□□□□□ -1.88
PMS2P54278 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PMS2P54278 FGF7P4-201ENST00000509595 295 ntBASIC3.29□□□□□ -1.88
PMS2P54278 RNU6-685P-201ENST00000517088 95 ntBASIC3.29□□□□□ -1.88
PMS2P54278 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.29□□□□□ -1.88
PMS2P54278 AC078814.3-201ENST00000553036 491 ntBASIC3.29□□□□□ -1.88
PMS2P54278 TRAV28-201ENST00000557548 323 ntBASIC3.29□□□□□ -1.88
PMS2P54278 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.29□□□□□ -1.88
PMS2P54278 AC010653.1-201ENST00000571108 881 ntBASIC3.29□□□□□ -1.88
PMS2P54278 MIR3609-201ENST00000582661 80 ntBASIC3.29□□□□□ -1.88
PMS2P54278 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.29□□□□□ -1.88
PMS2P54278 AL365204.3-201ENST00000612448 685 ntBASIC3.29□□□□□ -1.88
PMS2P54278 Y_RNA.804-201ENST00000615262 101 ntBASIC3.29□□□□□ -1.88
PMS2P54278 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.29□□□□□ -1.88
PMS2P54278 AC009233.1-201ENST00000616477 371 ntBASIC3.29□□□□□ -1.88
PMS2P54278 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.29□□□□□ -1.88
PMS2P54278 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.29□□□□□ -1.88
PMS2P54278 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.29□□□□□ -1.88
PMS2P54278 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
PMS2P54278 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PMS2P54278 MAPK10-322ENST00000641485 4530 ntBASIC3.29□□□□□ -1.88
PMS2P54278 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
PMS2P54278 AC022336.2-201ENST00000568966 2538 ntBASIC3.29□□□□□ -1.88
PMS2P54278 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
PMS2P54278 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.28□□□□□ -1.88
PMS2P54278 Y_RNA.11-201ENST00000362375 109 ntBASIC3.28□□□□□ -1.88
PMS2P54278 U3.12-201ENST00000364498 214 ntBASIC3.28□□□□□ -1.88
PMS2P54278 RNU4-20P-201ENST00000365601 151 ntBASIC3.28□□□□□ -1.88
PMS2P54278 RNU6-14P-201ENST00000384630 106 ntBASIC3.28□□□□□ -1.88
PMS2P54278 Y_RNA.576-201ENST00000384781 102 ntBASIC3.28□□□□□ -1.88
PMS2P54278 MIR128-1-201ENST00000384921 82 ntBASIC3.28□□□□□ -1.88
PMS2P54278 MT-TD-201ENST00000387419 68 ntBASIC3.28□□□□□ -1.88
PMS2P54278 MIR887-201ENST00000401258 79 ntBASIC3.28□□□□□ -1.88
PMS2P54278 RNU2-33P-201ENST00000410344 192 ntBASIC3.28□□□□□ -1.88
PMS2P54278 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PMS2P54278 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.28□□□□□ -1.88
PMS2P54278 Z82210.1-201ENST00000440037 231 ntBASIC3.28□□□□□ -1.88
PMS2P54278 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.28□□□□□ -1.88
PMS2P54278 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.28□□□□□ -1.88
PMS2P54278 AMD1P1-201ENST00000457220 922 ntBASIC3.28□□□□□ -1.88
PMS2P54278 MTND3P22-201ENST00000510932 243 ntBASIC3.28□□□□□ -1.88
PMS2P54278 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.28□□□□□ -1.88
PMS2P54278 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.28□□□□□ -1.88
PMS2P54278 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.28□□□□□ -1.88
PMS2P54278 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.28□□□□□ -1.88
PMS2P54278 PSMA2P1-201ENST00000526365 646 ntBASIC3.28□□□□□ -1.88
PMS2P54278 AC023050.3-201ENST00000541142 333 ntBASIC3.28□□□□□ -1.88
PMS2P54278 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.28□□□□□ -1.88
PMS2P54278 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.28□□□□□ -1.88
PMS2P54278 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.28□□□□□ -1.88
PMS2P54278 AC008521.1-201ENST00000587471 187 ntBASIC3.28□□□□□ -1.88
PMS2P54278 AC012493.2-201ENST00000595083 291 ntBASIC3.28□□□□□ -1.88
PMS2P54278 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.28□□□□□ -1.88
PMS2P54278 U6.114-201ENST00000636407 96 ntBASIC3.28□□□□□ -1.88
PMS2P54278 MTND1P37-201ENST00000636562 264 ntBASIC3.28□□□□□ -1.88
PMS2P54278 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PMS2P54278 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PMS2P54278 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.28□□□□□ -1.88
PMS2P54278 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
PMS2P54278 AL353743.1-202ENST00000431724 1695 ntBASIC3.27□□□□□ -1.89
PMS2P54278 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PMS2P54278 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PMS2P54278 SNORA51.4-201ENST00000364993 124 ntBASIC3.27□□□□□ -1.89
PMS2P54278 U8.9-201ENST00000365667 134 ntBASIC3.27□□□□□ -1.89
PMS2P54278 RNU6-701P-201ENST00000384059 107 ntBASIC3.27□□□□□ -1.89
PMS2P54278 MIR325-201ENST00000385260 98 ntBASIC3.27□□□□□ -1.89
PMS2P54278 SNORA26.7-201ENST00000391288 122 ntBASIC3.27□□□□□ -1.89
PMS2P54278 NDUFS5P1-201ENST00000405668 289 ntBASIC3.27□□□□□ -1.89
PMS2P54278 AL162578.1-201ENST00000406202 378 ntBASIC3.27□□□□□ -1.89
PMS2P54278 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.27□□□□□ -1.89
PMS2P54278 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PMS2P54278 RN7SKP58-201ENST00000411010 305 ntBASIC3.27□□□□□ -1.89
PMS2P54278 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.27□□□□□ -1.89
PMS2P54278 ARL5AP1-201ENST00000418991 388 ntBASIC3.27□□□□□ -1.89
PMS2P54278 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.27□□□□□ -1.89
PMS2P54278 HSPE1P1-201ENST00000421494 318 ntBASIC3.27□□□□□ -1.89
PMS2P54278 MTND4P28-201ENST00000426217 387 ntBASIC3.27□□□□□ -1.89
PMS2P54278 CALM2P2-201ENST00000428512 440 ntBASIC3.27□□□□□ -1.89
PMS2P54278 AC007919.1-201ENST00000429380 217 ntBASIC3.27□□□□□ -1.89
PMS2P54278 RPS12P18-201ENST00000442381 270 ntBASIC3.27□□□□□ -1.89
PMS2P54278 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC3.27□□□□□ -1.89
PMS2P54278 AL162395.1-201ENST00000457882 422 ntBASIC3.27□□□□□ -1.89
PMS2P54278 RPL37P6-201ENST00000460682 294 ntBASIC3.27□□□□□ -1.89
PMS2P54278 AC117522.3-201ENST00000507974 584 ntBASIC3.27□□□□□ -1.89
PMS2P54278 AC108078.2-201ENST00000510750 236 ntBASIC3.27□□□□□ -1.89
PMS2P54278 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.27□□□□□ -1.89
PMS2P54278 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PMS2P54278 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PMS2P54278 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.27□□□□□ -1.89
PMS2P54278 PSMA3P-201ENST00000555485 635 ntBASIC3.27□□□□□ -1.89
PMS2P54278 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.27□□□□□ -1.89
PMS2P54278 VN1R80P-201ENST00000597126 338 ntBASIC3.27□□□□□ -1.89
PMS2P54278 HSPE1P7-201ENST00000604681 321 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 197.4 ms