Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 U8.3-201ENST00000363321 132 ntBASIC1.2□□□□□ -2.22
NUP98P52948 RNU4-42P-201ENST00000364738 142 ntBASIC1.2□□□□□ -2.22
NUP98P52948 RNU6-19P-201ENST00000384718 107 ntBASIC1.2□□□□□ -2.22
NUP98P52948 MIR676-201ENST00000390702 67 ntBASIC1.2□□□□□ -2.22
NUP98P52948 RNU6-932P-201ENST00000391108 106 ntBASIC1.2□□□□□ -2.22
NUP98P52948 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
NUP98P52948 RNU2-63P-201ENST00000410792 194 ntBASIC1.2□□□□□ -2.22
NUP98P52948 MTATP6P27-201ENST00000416987 621 ntBASIC1.2□□□□□ -2.22
NUP98P52948 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.2□□□□□ -2.22
NUP98P52948 SNRPEP9-201ENST00000436794 238 ntBASIC1.2□□□□□ -2.22
NUP98P52948 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.2□□□□□ -2.22
NUP98P52948 AL357134.1-201ENST00000445848 426 ntBASIC1.2□□□□□ -2.22
NUP98P52948 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.2□□□□□ -2.22
NUP98P52948 RNA5SP137-201ENST00000516833 135 ntBASIC1.2□□□□□ -2.22
NUP98P52948 CBX3P8-201ENST00000532412 525 ntBASIC1.2□□□□□ -2.22
NUP98P52948 AC016957.1-201ENST00000534895 309 ntBASIC1.2□□□□□ -2.22
NUP98P52948 AC006199.1-201ENST00000548728 219 ntBASIC1.2□□□□□ -2.22
NUP98P52948 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.2□□□□□ -2.22
NUP98P52948 MIR3973-201ENST00000579824 107 ntBASIC1.2□□□□□ -2.22
NUP98P52948 KATNBL1P5-201ENST00000605015 517 ntBASIC1.2□□□□□ -2.22
NUP98P52948 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC1.2□□□□□ -2.22
NUP98P52948 AL050343.2-201ENST00000607338 280 ntBASIC1.2□□□□□ -2.22
NUP98P52948 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
NUP98P52948 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.2□□□□□ -2.22
NUP98P52948 SNRPEP3-201ENST00000338402 276 ntBASIC1.19□□□□□ -2.22
NUP98P52948 RNU6-754P-201ENST00000391166 107 ntBASIC1.19□□□□□ -2.22
NUP98P52948 AC068050.1-201ENST00000394891 380 ntBASIC1.19□□□□□ -2.22
NUP98P52948 AL591704.2-201ENST00000421658 181 ntBASIC1.19□□□□□ -2.22
NUP98P52948 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.19□□□□□ -2.22
NUP98P52948 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.19□□□□□ -2.22
NUP98P52948 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.19□□□□□ -2.22
NUP98P52948 AL441985.1-201ENST00000457727 251 ntBASIC1.19□□□□□ -2.22
NUP98P52948 AC005410.1-202ENST00000460347 485 ntBASIC1.19□□□□□ -2.22
NUP98P52948 RPL31P58-201ENST00000469001 379 ntBASIC1.19□□□□□ -2.22
NUP98P52948 RN7SKP179-201ENST00000516126 217 ntBASIC1.19□□□□□ -2.22
NUP98P52948 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.19□□□□□ -2.22
NUP98P52948 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.19□□□□□ -2.22
NUP98P52948 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
NUP98P52948 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.19□□□□□ -2.22
NUP98P52948 AC021739.1-201ENST00000559631 174 ntBASIC1.19□□□□□ -2.22
NUP98P52948 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.19□□□□□ -2.22
NUP98P52948 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.19□□□□□ -2.22
NUP98P52948 AC239868.4-201ENST00000608318 671 ntBASIC1.19□□□□□ -2.22
NUP98P52948 AC011939.3-201ENST00000613686 466 ntBASIC1.19□□□□□ -2.22
NUP98P52948 AL356473.1-201ENST00000406203 1408 ntBASIC1.19□□□□□ -2.22
NUP98P52948 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
NUP98P52948 AC244636.1-201ENST00000421152 228 ntBASIC1.19□□□□□ -2.22
NUP98P52948 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.19□□□□□ -2.22
NUP98P52948 MTND6P13-201ENST00000443510 523 ntBASIC1.19□□□□□ -2.22
NUP98P52948 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.19□□□□□ -2.22
NUP98P52948 snoU109.1-201ENST00000459339 135 ntBASIC1.19□□□□□ -2.22
NUP98P52948 AC087884.1-201ENST00000469738 328 ntBASIC1.19□□□□□ -2.22
NUP98P52948 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.19□□□□□ -2.22
NUP98P52948 AC020699.1-201ENST00000505161 445 ntBASIC1.19□□□□□ -2.22
NUP98P52948 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
NUP98P52948 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.19□□□□□ -2.22
NUP98P52948 AC006518.2-201ENST00000542513 940 ntBASIC1.19□□□□□ -2.22
NUP98P52948 MTCYBP23-201ENST00000558717 1102 ntBASIC1.19□□□□□ -2.22
NUP98P52948 CYP3A137P-201ENST00000562436 69 ntBASIC1.19□□□□□ -2.22
NUP98P52948 MIR5000-201ENST00000577717 103 ntBASIC1.19□□□□□ -2.22
NUP98P52948 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.19□□□□□ -2.22
NUP98P52948 AC004805.2-201ENST00000605382 482 ntBASIC1.19□□□□□ -2.22
NUP98P52948 AL450270.1-201ENST00000606160 391 ntBASIC1.19□□□□□ -2.22
NUP98P52948 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.19□□□□□ -2.22
NUP98P52948 AC009233.1-201ENST00000616477 371 ntBASIC1.19□□□□□ -2.22
NUP98P52948 AC024581.2-201ENST00000619986 252 ntBASIC1.19□□□□□ -2.22
NUP98P52948 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.19□□□□□ -2.22
NUP98P52948 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.19□□□□□ -2.22
NUP98P52948 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
NUP98P52948 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
NUP98P52948 MIR126-201ENST00000362291 85 ntBASIC1.18□□□□□ -2.22
NUP98P52948 U8.14-201ENST00000390843 143 ntBASIC1.18□□□□□ -2.22
NUP98P52948 RNU2-33P-201ENST00000410344 192 ntBASIC1.18□□□□□ -2.22
NUP98P52948 MTND1P21-201ENST00000412991 285 ntBASIC1.18□□□□□ -2.22
NUP98P52948 MTCYBP38-201ENST00000417160 1123 ntBASIC1.18□□□□□ -2.22
NUP98P52948 AL451054.2-201ENST00000420896 202 ntBASIC1.18□□□□□ -2.22
NUP98P52948 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.18□□□□□ -2.22
NUP98P52948 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.18□□□□□ -2.22
NUP98P52948 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.18□□□□□ -2.22
NUP98P52948 AC027575.1-201ENST00000481064 460 ntBASIC1.18□□□□□ -2.22
NUP98P52948 HMGB1P36-201ENST00000487709 576 ntBASIC1.18□□□□□ -2.22
NUP98P52948 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.18□□□□□ -2.22
NUP98P52948 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.18□□□□□ -2.22
NUP98P52948 AL031274.2-201ENST00000599419 203 ntBASIC1.18□□□□□ -2.22
NUP98P52948 AC010133.1-201ENST00000615809 842 ntBASIC1.18□□□□□ -2.22
NUP98P52948 AC099842.1-201ENST00000619919 596 ntBASIC1.18□□□□□ -2.22
NUP98P52948 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.18□□□□□ -2.22
NUP98P52948 RNU6-778P-201ENST00000363269 103 ntBASIC1.17□□□□□ -2.22
NUP98P52948 Y_RNA.245-201ENST00000364493 95 ntBASIC1.17□□□□□ -2.22
NUP98P52948 RPL22P22-201ENST00000395439 379 ntBASIC1.17□□□□□ -2.22
NUP98P52948 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.17□□□□□ -2.22
NUP98P52948 MTCO3P46-201ENST00000425787 232 ntBASIC1.17□□□□□ -2.22
NUP98P52948 AC093155.1-201ENST00000440164 826 ntBASIC1.17□□□□□ -2.22
NUP98P52948 MIR4698-201ENST00000577795 80 ntBASIC1.17□□□□□ -2.22
NUP98P52948 BNIP3P25-201ENST00000596023 559 ntBASIC1.17□□□□□ -2.22
NUP98P52948 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.17□□□□□ -2.22
NUP98P52948 MIR6857-201ENST00000613267 93 ntBASIC1.17□□□□□ -2.22
NUP98P52948 AL118556.2-201ENST00000614375 824 ntBASIC1.17□□□□□ -2.22
NUP98P52948 MIR506-201ENST00000384998 124 ntBASIC1.17□□□□□ -2.22
NUP98P52948 RNU4-27P-201ENST00000410889 139 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms