Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RN7SKP219-201ENST00000516825 296 ntBASIC2.8□□□□□ -1.96
PDX1P52945 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.8□□□□□ -1.96
PDX1P52945 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.8□□□□□ -1.96
PDX1P52945 AP003034.1-201ENST00000534621 422 ntBASIC2.8□□□□□ -1.96
PDX1P52945 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.8□□□□□ -1.96
PDX1P52945 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.8□□□□□ -1.96
PDX1P52945 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.8□□□□□ -1.96
PDX1P52945 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.8□□□□□ -1.96
PDX1P52945 MTCO3P24-201ENST00000572729 782 ntBASIC2.8□□□□□ -1.96
PDX1P52945 MIR3945-201ENST00000581853 98 ntBASIC2.8□□□□□ -1.96
PDX1P52945 BNIP3P30-201ENST00000601184 574 ntBASIC2.8□□□□□ -1.96
PDX1P52945 AC007621.1-201ENST00000604544 437 ntBASIC2.8□□□□□ -1.96
PDX1P52945 AC007938.3-201ENST00000604965 623 ntBASIC2.8□□□□□ -1.96
PDX1P52945 MTND4LP5-201ENST00000605152 292 ntBASIC2.8□□□□□ -1.96
PDX1P52945 AC093788.1-201ENST00000609356 927 ntBASIC2.8□□□□□ -1.96
PDX1P52945 U6.114-201ENST00000636407 96 ntBASIC2.8□□□□□ -1.96
PDX1P52945 U2.21-201ENST00000637295 81 ntBASIC2.8□□□□□ -1.96
PDX1P52945 AC068137.3-201ENST00000639191 341 ntBASIC2.8□□□□□ -1.96
PDX1P52945 AC073869.6-201ENST00000640656 341 ntBASIC2.8□□□□□ -1.96
PDX1P52945 AC006020.1-201ENST00000420179 1854 ntBASIC2.79□□□□□ -1.96
PDX1P52945 AC027514.1-201ENST00000588561 1603 ntBASIC2.79□□□□□ -1.96
PDX1P52945 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
PDX1P52945 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PDX1P52945 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PDX1P52945 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PDX1P52945 AL354685.2-201ENST00000448218 1447 ntBASIC2.79□□□□□ -1.96
PDX1P52945 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PDX1P52945 RNU6-552P-201ENST00000362869 119 ntBASIC2.79□□□□□ -1.96
PDX1P52945 RNU6-1085P-201ENST00000363576 107 ntBASIC2.79□□□□□ -1.96
PDX1P52945 RNU6-1090P-201ENST00000364065 94 ntBASIC2.79□□□□□ -1.96
PDX1P52945 SNORA14A-201ENST00000364773 135 ntBASIC2.79□□□□□ -1.96
PDX1P52945 SNORA9.2-201ENST00000365361 133 ntBASIC2.79□□□□□ -1.96
PDX1P52945 RNU6-116P-201ENST00000384042 109 ntBASIC2.79□□□□□ -1.96
PDX1P52945 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.79□□□□□ -1.96
PDX1P52945 RNU6-387P-201ENST00000411331 105 ntBASIC2.79□□□□□ -1.96
PDX1P52945 AL592148.1-201ENST00000413568 445 ntBASIC2.79□□□□□ -1.96
PDX1P52945 MTCYBP5-201ENST00000423752 1135 ntBASIC2.79□□□□□ -1.96
PDX1P52945 RPL7P46-201ENST00000425129 740 ntBASIC2.79□□□□□ -1.96
PDX1P52945 MTND3P21-201ENST00000433774 331 ntBASIC2.79□□□□□ -1.96
PDX1P52945 AL596276.1-201ENST00000434465 418 ntBASIC2.79□□□□□ -1.96
PDX1P52945 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.79□□□□□ -1.96
PDX1P52945 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.79□□□□□ -1.96
PDX1P52945 AC073415.1-201ENST00000449240 153 ntBASIC2.79□□□□□ -1.96
PDX1P52945 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.79□□□□□ -1.96
PDX1P52945 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
PDX1P52945 MTND4LP22-201ENST00000508209 276 ntBASIC2.79□□□□□ -1.96
PDX1P52945 Y_RNA.693-201ENST00000516641 110 ntBASIC2.79□□□□□ -1.96
PDX1P52945 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.79□□□□□ -1.96
PDX1P52945 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PDX1P52945 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.79□□□□□ -1.96
PDX1P52945 AL157871.3-201ENST00000557231 293 ntBASIC2.79□□□□□ -1.96
PDX1P52945 HMGB1P33-201ENST00000563485 527 ntBASIC2.79□□□□□ -1.96
PDX1P52945 MIR5583-1-201ENST00000580941 59 ntBASIC2.79□□□□□ -1.96
PDX1P52945 HMGN2P15-201ENST00000585707 270 ntBASIC2.79□□□□□ -1.96
PDX1P52945 AL670379.4-201ENST00000605279 254 ntBASIC2.79□□□□□ -1.96
PDX1P52945 AC010338.1-201ENST00000621823 717 ntBASIC2.79□□□□□ -1.96
PDX1P52945 AC010680.1-201ENST00000590024 3590 ntBASIC2.79□□□□□ -1.96
PDX1P52945 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.79□□□□□ -1.96
PDX1P52945 AP003122.5-201ENST00000527668 3766 ntBASIC2.79□□□□□ -1.96
PDX1P52945 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PDX1P52945 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
PDX1P52945 Y_RNA.6-201ENST00000362350 114 ntBASIC2.78□□□□□ -1.96
PDX1P52945 SNORD3E-201ENST00000362899 217 ntBASIC2.78□□□□□ -1.96
PDX1P52945 RNU6-1287P-201ENST00000362914 107 ntBASIC2.78□□□□□ -1.96
PDX1P52945 RNU6-778P-201ENST00000363269 103 ntBASIC2.78□□□□□ -1.96
PDX1P52945 RNU6-996P-201ENST00000365438 107 ntBASIC2.78□□□□□ -1.96
PDX1P52945 RNU6-1060P-201ENST00000384664 107 ntBASIC2.78□□□□□ -1.96
PDX1P52945 RNA5SP111-201ENST00000411386 101 ntBASIC2.78□□□□□ -1.96
PDX1P52945 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.78□□□□□ -1.96
PDX1P52945 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.78□□□□□ -1.96
PDX1P52945 OR6C66P-201ENST00000414917 930 ntBASIC2.78□□□□□ -1.96
PDX1P52945 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.78□□□□□ -1.96
PDX1P52945 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PDX1P52945 MYL8P-204ENST00000431574 518 ntBASIC2.78□□□□□ -1.96
PDX1P52945 AC087499.2-201ENST00000432861 149 ntBASIC2.78□□□□□ -1.96
PDX1P52945 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.78□□□□□ -1.96
PDX1P52945 AL714022.1-201ENST00000439897 151 ntBASIC2.78□□□□□ -1.96
PDX1P52945 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.78□□□□□ -1.96
PDX1P52945 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.78□□□□□ -1.96
PDX1P52945 GMFBP1-201ENST00000467831 427 ntBASIC2.78□□□□□ -1.96
PDX1P52945 AC083798.1-201ENST00000472671 131 ntBASIC2.78□□□□□ -1.96
PDX1P52945 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.78□□□□□ -1.96
PDX1P52945 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.78□□□□□ -1.96
PDX1P52945 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.78□□□□□ -1.96
PDX1P52945 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.78□□□□□ -1.96
PDX1P52945 AL512360.1-201ENST00000555346 234 ntBASIC2.78□□□□□ -1.96
PDX1P52945 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.78□□□□□ -1.96
PDX1P52945 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
PDX1P52945 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.78□□□□□ -1.96
PDX1P52945 DUSP12P1-201ENST00000612874 516 ntBASIC2.78□□□□□ -1.96
PDX1P52945 AL354950.2-201ENST00000617939 290 ntBASIC2.78□□□□□ -1.96
PDX1P52945 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.78□□□□□ -1.96
PDX1P52945 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PDX1P52945 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
PDX1P52945 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PDX1P52945 AC233263.6-201ENST00000631132 1963 ntBASIC2.78□□□□□ -1.97
PDX1P52945 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PDX1P52945 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.77□□□□□ -1.97
PDX1P52945 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.77□□□□□ -1.97
PDX1P52945 AL139276.1-201ENST00000311910 1001 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms