Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC087045.1-201ENST00000605856 382 ntBASIC2.99□□□□□ -1.93
HADHAP40939 AC008945.2-201ENST00000606056 604 ntBASIC2.99□□□□□ -1.93
HADHAP40939 AC093732.2-201ENST00000607950 274 ntBASIC2.99□□□□□ -1.93
HADHAP40939 AC007318.2-201ENST00000620999 243 ntBASIC2.99□□□□□ -1.93
HADHAP40939 SCARNA15.3-201ENST00000626315 122 ntBASIC2.99□□□□□ -1.93
HADHAP40939 SCARNA4.1-201ENST00000628597 123 ntBASIC2.99□□□□□ -1.93
HADHAP40939 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
HADHAP40939 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.99□□□□□ -1.93
HADHAP40939 AC004944.1-201ENST00000517807 3059 ntBASIC2.99□□□□□ -1.93
HADHAP40939 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.98□□□□□ -1.93
HADHAP40939 ASNSP3-201ENST00000451989 1306 ntBASIC2.98□□□□□ -1.93
HADHAP40939 MAPK10-266ENST00000641066 6555 ntBASIC2.98□□□□□ -1.93
HADHAP40939 SNORA68.1-201ENST00000364537 132 ntBASIC2.98□□□□□ -1.93
HADHAP40939 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
HADHAP40939 BX682237.1-201ENST00000415016 335 ntBASIC2.98□□□□□ -1.93
HADHAP40939 AL451074.5-201ENST00000415894 435 ntBASIC2.98□□□□□ -1.93
HADHAP40939 AC092427.1-202ENST00000430569 476 ntBASIC2.98□□□□□ -1.93
HADHAP40939 AL627311.1-201ENST00000431514 115 ntBASIC2.98□□□□□ -1.93
HADHAP40939 AC002486.1-201ENST00000435098 391 ntBASIC2.98□□□□□ -1.93
HADHAP40939 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.98□□□□□ -1.93
HADHAP40939 AL161651.1-201ENST00000440882 223 ntBASIC2.98□□□□□ -1.93
HADHAP40939 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.98□□□□□ -1.93
HADHAP40939 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.98□□□□□ -1.93
HADHAP40939 MTCO2P7-201ENST00000446518 666 ntBASIC2.98□□□□□ -1.93
HADHAP40939 RN7SL499P-201ENST00000481141 276 ntBASIC2.98□□□□□ -1.93
HADHAP40939 HMGB1P30-201ENST00000492455 606 ntBASIC2.98□□□□□ -1.93
HADHAP40939 MRPS36P2-201ENST00000512569 299 ntBASIC2.98□□□□□ -1.93
HADHAP40939 AP003034.1-201ENST00000534621 422 ntBASIC2.98□□□□□ -1.93
HADHAP40939 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.98□□□□□ -1.93
HADHAP40939 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HADHAP40939 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.98□□□□□ -1.93
HADHAP40939 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.98□□□□□ -1.93
HADHAP40939 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.98□□□□□ -1.93
HADHAP40939 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.98□□□□□ -1.93
HADHAP40939 AGGF1P4-201ENST00000568249 801 ntBASIC2.98□□□□□ -1.93
HADHAP40939 AC103810.1-201ENST00000579873 453 ntBASIC2.98□□□□□ -1.93
HADHAP40939 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.98□□□□□ -1.93
HADHAP40939 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.98□□□□□ -1.93
HADHAP40939 Z99129.1-201ENST00000612510 255 ntBASIC2.98□□□□□ -1.93
HADHAP40939 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.98□□□□□ -1.93
HADHAP40939 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HADHAP40939 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HADHAP40939 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
HADHAP40939 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
HADHAP40939 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
HADHAP40939 AC000403.1-201ENST00000613696 3585 ntBASIC2.97□□□□□ -1.93
HADHAP40939 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.97□□□□□ -1.93
HADHAP40939 AC093536.2-201ENST00000565257 1406 ntBASIC2.97□□□□□ -1.93
HADHAP40939 OR5H15-201ENST00000383696 930 ntBASIC2.97□□□□□ -1.93
HADHAP40939 RNU1-109P-201ENST00000383960 147 ntBASIC2.97□□□□□ -1.93
HADHAP40939 RNU6-259P-201ENST00000383999 107 ntBASIC2.97□□□□□ -1.93
HADHAP40939 RNU6-1083P-201ENST00000384022 107 ntBASIC2.97□□□□□ -1.93
HADHAP40939 U3.26-201ENST00000391236 204 ntBASIC2.97□□□□□ -1.93
HADHAP40939 RNU2-66P-201ENST00000410650 161 ntBASIC2.97□□□□□ -1.93
HADHAP40939 Y_RNA.623-201ENST00000411128 95 ntBASIC2.97□□□□□ -1.93
HADHAP40939 AL031779.1-201ENST00000415663 330 ntBASIC2.97□□□□□ -1.93
HADHAP40939 MORF4L1P6-201ENST00000418771 268 ntBASIC2.97□□□□□ -1.93
HADHAP40939 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.97□□□□□ -1.93
HADHAP40939 AC010975.2-201ENST00000427781 588 ntBASIC2.97□□□□□ -1.93
HADHAP40939 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.97□□□□□ -1.93
HADHAP40939 MTND1P18-201ENST00000448191 573 ntBASIC2.97□□□□□ -1.93
HADHAP40939 NANOGNBP1-201ENST00000448444 480 ntBASIC2.97□□□□□ -1.93
HADHAP40939 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC2.97□□□□□ -1.93
HADHAP40939 AL441985.1-201ENST00000457727 251 ntBASIC2.97□□□□□ -1.93
HADHAP40939 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.97□□□□□ -1.93
HADHAP40939 AC022493.1-201ENST00000492984 337 ntBASIC2.97□□□□□ -1.93
HADHAP40939 AC104136.1-201ENST00000512969 394 ntBASIC2.97□□□□□ -1.93
HADHAP40939 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.97□□□□□ -1.93
HADHAP40939 RNU5F-8P-201ENST00000515941 111 ntBASIC2.97□□□□□ -1.93
HADHAP40939 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.97□□□□□ -1.93
HADHAP40939 OR5AQ1P-201ENST00000527596 927 ntBASIC2.97□□□□□ -1.93
HADHAP40939 GLYCAM1-201ENST00000546596 285 ntBASIC2.97□□□□□ -1.93
HADHAP40939 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.97□□□□□ -1.93
HADHAP40939 AL121821.2-201ENST00000556081 394 ntBASIC2.97□□□□□ -1.93
HADHAP40939 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.97□□□□□ -1.93
HADHAP40939 AC009063.1-201ENST00000563342 702 ntBASIC2.97□□□□□ -1.93
HADHAP40939 AC004223.2-201ENST00000590309 544 ntBASIC2.97□□□□□ -1.93
HADHAP40939 AC012119.1-201ENST00000603184 222 ntBASIC2.97□□□□□ -1.93
HADHAP40939 AC025449.1-201ENST00000603896 529 ntBASIC2.97□□□□□ -1.93
HADHAP40939 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HADHAP40939 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.97□□□□□ -1.93
HADHAP40939 AC010329.5-201ENST00000623497 2174 ntBASIC2.97□□□□□ -1.93
HADHAP40939 AC092447.7-201ENST00000422212 1621 ntBASIC2.97□□□□□ -1.93
HADHAP40939 ZNF680P1-201ENST00000436625 1469 ntBASIC2.96□□□□□ -1.93
HADHAP40939 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
HADHAP40939 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
HADHAP40939 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HADHAP40939 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.96□□□□□ -1.94
HADHAP40939 Y_RNA.159-201ENST00000363674 87 ntBASIC2.96□□□□□ -1.94
HADHAP40939 RNU6-371P-201ENST00000364283 108 ntBASIC2.96□□□□□ -1.94
HADHAP40939 SNORA9.2-201ENST00000365361 133 ntBASIC2.96□□□□□ -1.94
HADHAP40939 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HADHAP40939 SET-203ENST00000372688 801 ntTSL 2 BASIC2.96□□□□□ -1.94
HADHAP40939 Z98749.2-208ENST00000381646 500 ntBASIC2.96□□□□□ -1.94
HADHAP40939 RNU6-1029P-201ENST00000384109 107 ntBASIC2.96□□□□□ -1.94
HADHAP40939 RNU6-851P-201ENST00000384565 107 ntBASIC2.96□□□□□ -1.94
HADHAP40939 MIR34A-201ENST00000385130 110 ntBASIC2.96□□□□□ -1.94
HADHAP40939 RNU6-550P-201ENST00000391057 101 ntBASIC2.96□□□□□ -1.94
HADHAP40939 RPS4XP8-201ENST00000402039 771 ntBASIC2.96□□□□□ -1.94
HADHAP40939 SNORD88.1-201ENST00000408684 91 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms