Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 MTCO1P27-201ENST00000448269 226 ntBASIC1.91□□□□□ -2.1
BRCA1P38398 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.91□□□□□ -2.1
BRCA1P38398 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.91□□□□□ -2.1
BRCA1P38398 AC013267.1-201ENST00000458227 267 ntBASIC1.91□□□□□ -2.1
BRCA1P38398 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.91□□□□□ -2.1
BRCA1P38398 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.91□□□□□ -2.1
BRCA1P38398 AC104563.1-201ENST00000476147 376 ntBASIC1.91□□□□□ -2.1
BRCA1P38398 MRPL42P6-201ENST00000486397 371 ntBASIC1.91□□□□□ -2.1
BRCA1P38398 HMGN1P7-201ENST00000491722 313 ntBASIC1.91□□□□□ -2.1
BRCA1P38398 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.91□□□□□ -2.1
BRCA1P38398 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.91□□□□□ -2.1
BRCA1P38398 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.91□□□□□ -2.1
BRCA1P38398 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
BRCA1P38398 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.91□□□□□ -2.1
BRCA1P38398 AC021739.1-201ENST00000559631 174 ntBASIC1.91□□□□□ -2.1
BRCA1P38398 AC022662.1-201ENST00000580252 331 ntBASIC1.91□□□□□ -2.1
BRCA1P38398 AC245297.2-201ENST00000610119 565 ntBASIC1.91□□□□□ -2.1
BRCA1P38398 AC116618.1-201ENST00000634617 774 ntBASIC1.91□□□□□ -2.1
BRCA1P38398 MTND5P33-201ENST00000571250 1450 ntBASIC1.91□□□□□ -2.1
BRCA1P38398 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
BRCA1P38398 NACAP2-201ENST00000318548 624 ntBASIC1.9□□□□□ -2.1
BRCA1P38398 U8.1-201ENST00000362843 134 ntBASIC1.9□□□□□ -2.1
BRCA1P38398 Y_RNA.192-201ENST00000363977 102 ntBASIC1.9□□□□□ -2.1
BRCA1P38398 RNU6-1280P-201ENST00000365211 107 ntBASIC1.9□□□□□ -2.1
BRCA1P38398 RNU6-19P-201ENST00000384718 107 ntBASIC1.9□□□□□ -2.1
BRCA1P38398 RNU6-220P-201ENST00000390919 107 ntBASIC1.9□□□□□ -2.1
BRCA1P38398 AL513475.1-201ENST00000406602 315 ntBASIC1.9□□□□□ -2.1
BRCA1P38398 SNORD23.1-201ENST00000408212 104 ntBASIC1.9□□□□□ -2.1
BRCA1P38398 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.9□□□□□ -2.1
BRCA1P38398 AL365400.1-201ENST00000431854 640 ntBASIC1.9□□□□□ -2.1
BRCA1P38398 GPM6BP2-201ENST00000432046 144 ntBASIC1.9□□□□□ -2.1
BRCA1P38398 RPL7P34-201ENST00000433316 712 ntBASIC1.9□□□□□ -2.1
BRCA1P38398 Z80107.1-201ENST00000436830 412 ntBASIC1.9□□□□□ -2.1
BRCA1P38398 EEF1A1P39-201ENST00000440791 250 ntBASIC1.9□□□□□ -2.1
BRCA1P38398 GPM6BP1-201ENST00000446387 144 ntBASIC1.9□□□□□ -2.1
BRCA1P38398 AC009474.2-201ENST00000451383 136 ntBASIC1.9□□□□□ -2.1
BRCA1P38398 RPL37P6-201ENST00000460682 294 ntBASIC1.9□□□□□ -2.1
BRCA1P38398 AF131216.2-201ENST00000512316 564 ntBASIC1.9□□□□□ -2.1
BRCA1P38398 RNA5SP220-201ENST00000516298 104 ntBASIC1.9□□□□□ -2.1
BRCA1P38398 RNU1-92P-201ENST00000517017 135 ntBASIC1.9□□□□□ -2.1
BRCA1P38398 AC109329.1-201ENST00000518744 317 ntBASIC1.9□□□□□ -2.1
BRCA1P38398 AC010186.2-204ENST00000537668 439 ntBASIC1.9□□□□□ -2.1
BRCA1P38398 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.9□□□□□ -2.1
BRCA1P38398 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.9□□□□□ -2.1
BRCA1P38398 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.9□□□□□ -2.1
BRCA1P38398 BNIP3P9-201ENST00000603714 553 ntBASIC1.9□□□□□ -2.1
BRCA1P38398 SEPT7P9-203ENST00000604116 343 ntBASIC1.9□□□□□ -2.1
BRCA1P38398 RNU6-701P-201ENST00000384059 107 ntBASIC1.9□□□□□ -2.11
BRCA1P38398 SNORA40C-201ENST00000391285 128 ntBASIC1.9□□□□□ -2.11
BRCA1P38398 ZNF90P2-204ENST00000419323 1075 ntBASIC1.9□□□□□ -2.11
BRCA1P38398 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.9□□□□□ -2.11
BRCA1P38398 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.9□□□□□ -2.11
BRCA1P38398 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.9□□□□□ -2.11
BRCA1P38398 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.9□□□□□ -2.11
BRCA1P38398 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
BRCA1P38398 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.9□□□□□ -2.11
BRCA1P38398 AC008526.1-201ENST00000509149 338 ntBASIC1.9□□□□□ -2.11
BRCA1P38398 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.9□□□□□ -2.11
BRCA1P38398 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.9□□□□□ -2.11
BRCA1P38398 AC025755.1-201ENST00000521306 278 ntBASIC1.9□□□□□ -2.11
BRCA1P38398 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.9□□□□□ -2.11
BRCA1P38398 AC090888.1-201ENST00000561335 1141 ntBASIC1.9□□□□□ -2.11
BRCA1P38398 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.9□□□□□ -2.11
BRCA1P38398 AC009127.3-201ENST00000570531 403 ntBASIC1.9□□□□□ -2.11
BRCA1P38398 AC090079.2-201ENST00000575289 768 ntBASIC1.9□□□□□ -2.11
BRCA1P38398 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.9□□□□□ -2.11
BRCA1P38398 RNU6-91P-201ENST00000607774 107 ntBASIC1.9□□□□□ -2.11
BRCA1P38398 AC007038.2-201ENST00000608095 740 ntBASIC1.9□□□□□ -2.11
BRCA1P38398 OR10AB1P-201ENST00000609613 938 ntBASIC1.9□□□□□ -2.11
BRCA1P38398 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.9□□□□□ -2.11
BRCA1P38398 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.9□□□□□ -2.11
BRCA1P38398 AC112204.3-201ENST00000623822 332 ntBASIC1.9□□□□□ -2.11
BRCA1P38398 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.9□□□□□ -2.11
BRCA1P38398 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
BRCA1P38398 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
BRCA1P38398 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
BRCA1P38398 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.89□□□□□ -2.11
BRCA1P38398 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.89□□□□□ -2.11
BRCA1P38398 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.89□□□□□ -2.11
BRCA1P38398 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.89□□□□□ -2.11
BRCA1P38398 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.89□□□□□ -2.11
BRCA1P38398 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.89□□□□□ -2.11
BRCA1P38398 RNU6-703P-201ENST00000516946 107 ntBASIC1.89□□□□□ -2.11
BRCA1P38398 AC068587.4-201ENST00000533893 186 ntBASIC1.89□□□□□ -2.11
BRCA1P38398 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.89□□□□□ -2.11
BRCA1P38398 AL133153.1-201ENST00000557756 303 ntBASIC1.89□□□□□ -2.11
BRCA1P38398 MTCYBP23-201ENST00000558717 1102 ntBASIC1.89□□□□□ -2.11
BRCA1P38398 MIR5694-201ENST00000581190 76 ntBASIC1.89□□□□□ -2.11
BRCA1P38398 MIR4765-201ENST00000585007 77 ntBASIC1.89□□□□□ -2.11
BRCA1P38398 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.89□□□□□ -2.11
BRCA1P38398 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.89□□□□□ -2.11
BRCA1P38398 AC010928.2-201ENST00000588017 287 ntBASIC1.89□□□□□ -2.11
BRCA1P38398 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.89□□□□□ -2.11
BRCA1P38398 AL158050.2-201ENST00000605336 568 ntBASIC1.89□□□□□ -2.11
BRCA1P38398 AC131235.4-201ENST00000609288 620 ntBASIC1.89□□□□□ -2.11
BRCA1P38398 AC010608.3-201ENST00000625048 527 ntBASIC1.89□□□□□ -2.11
BRCA1P38398 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
BRCA1P38398 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.89□□□□□ -2.11
BRCA1P38398 RNU6-1083P-201ENST00000384022 107 ntBASIC1.88□□□□□ -2.11
BRCA1P38398 MIR517C-201ENST00000385103 95 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms