Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 RNU2-68P-201ENST00000410878 191 ntBASIC0.57□□□□□ -2.32
SNCAP37840 AC078974.1-201ENST00000411597 223 ntBASIC0.57□□□□□ -2.32
SNCAP37840 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.57□□□□□ -2.32
SNCAP37840 TRIM60P13-201ENST00000432350 1283 ntBASIC0.57□□□□□ -2.32
SNCAP37840 TOMM22P6-201ENST00000465035 409 ntBASIC0.57□□□□□ -2.32
SNCAP37840 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.57□□□□□ -2.32
SNCAP37840 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.57□□□□□ -2.32
SNCAP37840 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC0.57□□□□□ -2.32
SNCAP37840 MIR4661-201ENST00000582720 75 ntBASIC0.57□□□□□ -2.32
SNCAP37840 CYP2C61P-201ENST00000604072 290 ntBASIC0.57□□□□□ -2.32
SNCAP37840 AL590095.2-201ENST00000604136 117 ntBASIC0.57□□□□□ -2.32
SNCAP37840 AF129408.1-201ENST00000608767 431 ntBASIC0.57□□□□□ -2.32
SNCAP37840 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.57□□□□□ -2.32
SNCAP37840 OR5T3-201ENST00000303059 1023 ntBASIC0.56□□□□□ -2.32
SNCAP37840 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.56□□□□□ -2.32
SNCAP37840 RNU5E-1-201ENST00000362477 120 ntBASIC0.56□□□□□ -2.32
SNCAP37840 SNORD115-3-201ENST00000363100 82 ntBASIC0.56□□□□□ -2.32
SNCAP37840 SNORD114-27-201ENST00000363766 70 ntBASIC0.56□□□□□ -2.32
SNCAP37840 SNORD1A-201ENST00000364968 72 ntBASIC0.56□□□□□ -2.32
SNCAP37840 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
SNCAP37840 RNU6-968P-201ENST00000384076 107 ntBASIC0.56□□□□□ -2.32
SNCAP37840 Y_RNA.595-201ENST00000410403 105 ntBASIC0.56□□□□□ -2.32
SNCAP37840 USP9YP19-201ENST00000412165 485 ntBASIC0.56□□□□□ -2.32
SNCAP37840 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.56□□□□□ -2.32
SNCAP37840 USP9YP13-201ENST00000417797 480 ntBASIC0.56□□□□□ -2.32
SNCAP37840 SKA2P1-201ENST00000425592 390 ntBASIC0.56□□□□□ -2.32
SNCAP37840 AC004941.2-201ENST00000427009 228 ntBASIC0.56□□□□□ -2.32
SNCAP37840 Z82205.1-201ENST00000428456 297 ntBASIC0.56□□□□□ -2.32
SNCAP37840 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.56□□□□□ -2.32
SNCAP37840 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
SNCAP37840 MTND2P24-201ENST00000453434 806 ntBASIC0.56□□□□□ -2.32
SNCAP37840 TRMT112P2-201ENST00000512910 132 ntBASIC0.56□□□□□ -2.32
SNCAP37840 AC108729.3-201ENST00000513484 108 ntBASIC0.56□□□□□ -2.32
SNCAP37840 RNU6-322P-201ENST00000516010 103 ntBASIC0.56□□□□□ -2.32
SNCAP37840 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.56□□□□□ -2.32
SNCAP37840 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC0.56□□□□□ -2.32
SNCAP37840 AC027104.1-201ENST00000563702 681 ntBASIC0.56□□□□□ -2.32
SNCAP37840 ROCK1P1-201ENST00000573767 549 ntBASIC0.56□□□□□ -2.32
SNCAP37840 MIR3973-201ENST00000579824 107 ntBASIC0.56□□□□□ -2.32
SNCAP37840 RN7SL622P-201ENST00000585292 275 ntBASIC0.56□□□□□ -2.32
SNCAP37840 MIR6835-201ENST00000621552 64 ntBASIC0.56□□□□□ -2.32
SNCAP37840 AL133216.2-202ENST00000634512 349 ntBASIC0.56□□□□□ -2.32
SNCAP37840 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.56□□□□□ -2.32
SNCAP37840 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.56□□□□□ -2.32
SNCAP37840 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
SNCAP37840 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.55□□□□□ -2.32
SNCAP37840 ENSAP3-201ENST00000312710 333 ntBASIC0.55□□□□□ -2.32
SNCAP37840 RNU6-778P-201ENST00000363269 103 ntBASIC0.55□□□□□ -2.32
SNCAP37840 AC127391.1-201ENST00000411737 98 ntBASIC0.55□□□□□ -2.32
SNCAP37840 AC069282.1-201ENST00000411911 526 ntBASIC0.55□□□□□ -2.32
SNCAP37840 TPMTP3-201ENST00000411928 735 ntBASIC0.55□□□□□ -2.32
SNCAP37840 RPS15AP12-201ENST00000419498 388 ntBASIC0.55□□□□□ -2.32
SNCAP37840 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.55□□□□□ -2.32
SNCAP37840 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.55□□□□□ -2.32
SNCAP37840 MTCYBP32-201ENST00000427945 1084 ntBASIC0.55□□□□□ -2.32
SNCAP37840 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC0.55□□□□□ -2.32
SNCAP37840 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC0.55□□□□□ -2.32
SNCAP37840 AC245102.2-201ENST00000448956 180 ntBASIC0.55□□□□□ -2.32
SNCAP37840 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.55□□□□□ -2.32
SNCAP37840 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC0.55□□□□□ -2.32
SNCAP37840 PSMC1P5-201ENST00000512850 177 ntBASIC0.55□□□□□ -2.32
SNCAP37840 RN7SKP265-201ENST00000516448 223 ntBASIC0.55□□□□□ -2.32
SNCAP37840 SCARNA16.2-201ENST00000516520 172 ntBASIC0.55□□□□□ -2.32
SNCAP37840 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC0.55□□□□□ -2.32
SNCAP37840 AP000907.2-201ENST00000530827 353 ntBASIC0.55□□□□□ -2.32
SNCAP37840 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.55□□□□□ -2.32
SNCAP37840 AC073544.2-201ENST00000601155 540 ntBASIC0.55□□□□□ -2.32
SNCAP37840 AC027335.2-201ENST00000624030 375 ntBASIC0.55□□□□□ -2.32
SNCAP37840 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC0.55□□□□□ -2.32
SNCAP37840 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.55□□□□□ -2.32
SNCAP37840 AC092125.1-201ENST00000562568 1995 ntBASIC0.55□□□□□ -2.32
SNCAP37840 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.55□□□□□ -2.32
SNCAP37840 RNU1-58P-201ENST00000362413 163 ntBASIC0.54□□□□□ -2.32
SNCAP37840 SNORA51.6-201ENST00000384151 125 ntBASIC0.54□□□□□ -2.32
SNCAP37840 MIR1262-201ENST00000408276 93 ntBASIC0.54□□□□□ -2.32
SNCAP37840 CYCSP33-201ENST00000414485 327 ntBASIC0.54□□□□□ -2.32
SNCAP37840 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.54□□□□□ -2.32
SNCAP37840 RPL31P54-201ENST00000429803 370 ntBASIC0.54□□□□□ -2.32
SNCAP37840 AL161651.1-201ENST00000440882 223 ntBASIC0.54□□□□□ -2.32
SNCAP37840 RPL21P47-201ENST00000483696 477 ntBASIC0.54□□□□□ -2.32
SNCAP37840 AC117454.1-201ENST00000491120 168 ntBASIC0.54□□□□□ -2.32
SNCAP37840 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.54□□□□□ -2.32
SNCAP37840 AF131216.2-201ENST00000512316 564 ntBASIC0.54□□□□□ -2.32
SNCAP37840 RNU6-667P-201ENST00000517186 102 ntBASIC0.54□□□□□ -2.32
SNCAP37840 AP003066.2-201ENST00000529375 555 ntBASIC0.54□□□□□ -2.32
SNCAP37840 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.54□□□□□ -2.32
SNCAP37840 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC0.54□□□□□ -2.32
SNCAP37840 AC090079.2-201ENST00000575289 768 ntBASIC0.54□□□□□ -2.32
SNCAP37840 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.54□□□□□ -2.32
SNCAP37840 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.54□□□□□ -2.32
SNCAP37840 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.54□□□□□ -2.32
SNCAP37840 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
SNCAP37840 RNU6-1164P-201ENST00000364428 107 ntBASIC0.53□□□□□ -2.32
SNCAP37840 AL121978.1-201ENST00000402778 359 ntBASIC0.53□□□□□ -2.32
SNCAP37840 RNU2-48P-201ENST00000410694 191 ntBASIC0.53□□□□□ -2.32
SNCAP37840 HMGN1P14-201ENST00000412459 517 ntBASIC0.53□□□□□ -2.32
SNCAP37840 AC007919.1-201ENST00000429380 217 ntBASIC0.53□□□□□ -2.32
SNCAP37840 CALM1P1-201ENST00000442082 433 ntBASIC0.53□□□□□ -2.32
SNCAP37840 PGBD4P5-201ENST00000445958 426 ntBASIC0.53□□□□□ -2.32
SNCAP37840 AC108078.2-201ENST00000510750 236 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms