Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 ELOCP29-201ENST00000588193 334 ntBASIC2.61□□□□□ -1.99
CTNNA1P35221 AL355297.2-201ENST00000604792 129 ntBASIC2.61□□□□□ -1.99
CTNNA1P35221 AL139286.2-201ENST00000606838 396 ntBASIC2.61□□□□□ -1.99
CTNNA1P35221 AC096772.1-201ENST00000609146 564 ntBASIC2.61□□□□□ -1.99
CTNNA1P35221 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
CTNNA1P35221 AC012640.5-201ENST00000623897 319 ntBASIC2.61□□□□□ -1.99
CTNNA1P35221 AP003400.5-201ENST00000624827 617 ntBASIC2.61□□□□□ -1.99
CTNNA1P35221 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CTNNA1P35221 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
CTNNA1P35221 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
CTNNA1P35221 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CTNNA1P35221 SNORD3E-201ENST00000362899 217 ntBASIC2.6□□□□□ -1.99
CTNNA1P35221 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CTNNA1P35221 MIR558-201ENST00000384920 94 ntBASIC2.6□□□□□ -1.99
CTNNA1P35221 SNORA48.2-201ENST00000390926 124 ntBASIC2.6□□□□□ -1.99
CTNNA1P35221 CISD1P1-201ENST00000393907 327 ntBASIC2.6□□□□□ -1.99
CTNNA1P35221 UBE2V1P2-201ENST00000397758 440 ntBASIC2.6□□□□□ -1.99
CTNNA1P35221 RNU2-39P-201ENST00000410604 198 ntBASIC2.6□□□□□ -1.99
CTNNA1P35221 RNU2-8P-201ENST00000410727 190 ntBASIC2.6□□□□□ -1.99
CTNNA1P35221 RNA5SP270-201ENST00000411361 118 ntBASIC2.6□□□□□ -1.99
CTNNA1P35221 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.6□□□□□ -1.99
CTNNA1P35221 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.6□□□□□ -1.99
CTNNA1P35221 Z99497.1-201ENST00000421282 135 ntBASIC2.6□□□□□ -1.99
CTNNA1P35221 AL160275.3-201ENST00000423876 471 ntBASIC2.6□□□□□ -1.99
CTNNA1P35221 AC006946.1-201ENST00000429106 328 ntBASIC2.6□□□□□ -1.99
CTNNA1P35221 AP000936.2-201ENST00000447151 681 ntBASIC2.6□□□□□ -1.99
CTNNA1P35221 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.6□□□□□ -1.99
CTNNA1P35221 AC012308.1-201ENST00000451232 178 ntBASIC2.6□□□□□ -1.99
CTNNA1P35221 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CTNNA1P35221 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.6□□□□□ -1.99
CTNNA1P35221 SNORD109B-201ENST00000458961 67 ntBASIC2.6□□□□□ -1.99
CTNNA1P35221 SNORD109A-201ENST00000459128 67 ntBASIC2.6□□□□□ -1.99
CTNNA1P35221 AC073901.1-201ENST00000462471 408 ntBASIC2.6□□□□□ -1.99
CTNNA1P35221 AC022493.1-201ENST00000492984 337 ntBASIC2.6□□□□□ -1.99
CTNNA1P35221 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.6□□□□□ -1.99
CTNNA1P35221 AC112206.3-201ENST00000514578 389 ntBASIC2.6□□□□□ -1.99
CTNNA1P35221 RNU6-123P-201ENST00000516163 102 ntBASIC2.6□□□□□ -1.99
CTNNA1P35221 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.6□□□□□ -1.99
CTNNA1P35221 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CTNNA1P35221 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.6□□□□□ -1.99
CTNNA1P35221 ZNF321P-202ENST00000550843 495 ntBASIC2.6□□□□□ -1.99
CTNNA1P35221 RPL21P5-201ENST00000554662 472 ntBASIC2.6□□□□□ -1.99
CTNNA1P35221 MIR548AC-201ENST00000585049 88 ntBASIC2.6□□□□□ -1.99
CTNNA1P35221 AC092354.1-201ENST00000606057 376 ntBASIC2.6□□□□□ -1.99
CTNNA1P35221 AL451064.1-201ENST00000607718 471 ntBASIC2.6□□□□□ -1.99
CTNNA1P35221 AC010378.1-201ENST00000619270 362 ntBASIC2.6□□□□□ -1.99
CTNNA1P35221 AC006020.1-201ENST00000420179 1854 ntBASIC2.6□□□□□ -1.99
CTNNA1P35221 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.6□□□□□ -1.99
CTNNA1P35221 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CTNNA1P35221 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CTNNA1P35221 SNORA9-201ENST00000384215 133 ntBASIC2.59□□□□□ -1.99
CTNNA1P35221 RPL23AP32-201ENST00000395315 459 ntBASIC2.59□□□□□ -1.99
CTNNA1P35221 AL139039.1-201ENST00000401900 692 ntBASIC2.59□□□□□ -1.99
CTNNA1P35221 SNORD23.1-201ENST00000408212 104 ntBASIC2.59□□□□□ -1.99
CTNNA1P35221 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.59□□□□□ -1.99
CTNNA1P35221 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.59□□□□□ -1.99
CTNNA1P35221 AL627311.1-201ENST00000431514 115 ntBASIC2.59□□□□□ -1.99
CTNNA1P35221 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.59□□□□□ -1.99
CTNNA1P35221 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC2.59□□□□□ -1.99
CTNNA1P35221 AC016691.1-201ENST00000441321 413 ntBASIC2.59□□□□□ -1.99
CTNNA1P35221 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.59□□□□□ -1.99
CTNNA1P35221 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CTNNA1P35221 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.59□□□□□ -1.99
CTNNA1P35221 RNU7-125P-201ENST00000458760 62 ntBASIC2.59□□□□□ -1.99
CTNNA1P35221 RPL7P43-201ENST00000478876 753 ntBASIC2.59□□□□□ -1.99
CTNNA1P35221 AC117522.1-201ENST00000509821 380 ntBASIC2.59□□□□□ -1.99
CTNNA1P35221 AC117522.2-201ENST00000510049 657 ntBASIC2.59□□□□□ -1.99
CTNNA1P35221 RNU7-193P-201ENST00000516723 65 ntBASIC2.59□□□□□ -1.99
CTNNA1P35221 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.59□□□□□ -1.99
CTNNA1P35221 AP004607.1-201ENST00000524456 203 ntBASIC2.59□□□□□ -1.99
CTNNA1P35221 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
CTNNA1P35221 PSMA3P-201ENST00000555485 635 ntBASIC2.59□□□□□ -1.99
CTNNA1P35221 MYL12BP1-201ENST00000569826 507 ntBASIC2.59□□□□□ -1.99
CTNNA1P35221 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.59□□□□□ -1.99
CTNNA1P35221 DEFB131E-202ENST00000602581 683 ntBASIC2.59□□□□□ -1.99
CTNNA1P35221 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CTNNA1P35221 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CTNNA1P35221 RNY1P12-201ENST00000364251 105 ntBASIC2.58□□□□□ -2
CTNNA1P35221 SNORA41-201ENST00000384675 132 ntBASIC2.58□□□□□ -2
CTNNA1P35221 Y_RNA.560-201ENST00000384689 102 ntBASIC2.58□□□□□ -2
CTNNA1P35221 MIR27B-201ENST00000385129 97 ntBASIC2.58□□□□□ -2
CTNNA1P35221 RPS3AP36-201ENST00000398190 775 ntBASIC2.58□□□□□ -2
CTNNA1P35221 Y_RNA.598-201ENST00000410480 95 ntBASIC2.58□□□□□ -2
CTNNA1P35221 AC127391.1-201ENST00000411737 98 ntBASIC2.58□□□□□ -2
CTNNA1P35221 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.58□□□□□ -2
CTNNA1P35221 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.58□□□□□ -2
CTNNA1P35221 AC098826.1-201ENST00000433943 471 ntBASIC2.58□□□□□ -2
CTNNA1P35221 MTND1P30-201ENST00000441241 901 ntBASIC2.58□□□□□ -2
CTNNA1P35221 FABP5P5-201ENST00000515537 406 ntBASIC2.58□□□□□ -2
CTNNA1P35221 SNORA31.11-201ENST00000516528 139 ntBASIC2.58□□□□□ -2
CTNNA1P35221 RNU6-232P-201ENST00000517144 64 ntBASIC2.58□□□□□ -2
CTNNA1P35221 AC008015.1-201ENST00000555505 465 ntBASIC2.58□□□□□ -2
CTNNA1P35221 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
CTNNA1P35221 BNIP3P30-201ENST00000601184 574 ntBASIC2.58□□□□□ -2
CTNNA1P35221 AL353778.1-201ENST00000603149 408 ntBASIC2.58□□□□□ -2
CTNNA1P35221 AC018638.7-201ENST00000605836 1114 ntBASIC2.58□□□□□ -2
CTNNA1P35221 AC093788.1-201ENST00000609356 927 ntBASIC2.58□□□□□ -2
CTNNA1P35221 AL161423.1-201ENST00000613700 262 ntBASIC2.58□□□□□ -2
CTNNA1P35221 AC079248.2-201ENST00000623779 326 ntBASIC2.58□□□□□ -2
CTNNA1P35221 MIR203B-201ENST00000636080 86 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms