Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.16□□□□□ -2.06
HOXA9P31269 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.16□□□□□ -2.06
HOXA9P31269 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.16□□□□□ -2.06
HOXA9P31269 BNIP3P2-201ENST00000441221 577 ntBASIC2.16□□□□□ -2.06
HOXA9P31269 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.16□□□□□ -2.06
HOXA9P31269 CBWD4P-201ENST00000445695 655 ntBASIC2.16□□□□□ -2.06
HOXA9P31269 BMI1P1-201ENST00000445879 941 ntBASIC2.16□□□□□ -2.06
HOXA9P31269 AL590365.1-201ENST00000450788 243 ntBASIC2.16□□□□□ -2.06
HOXA9P31269 AC098826.2-201ENST00000452011 651 ntBASIC2.16□□□□□ -2.06
HOXA9P31269 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.16□□□□□ -2.06
HOXA9P31269 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.16□□□□□ -2.06
HOXA9P31269 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.16□□□□□ -2.06
HOXA9P31269 AP000797.1-201ENST00000478870 387 ntBASIC2.16□□□□□ -2.06
HOXA9P31269 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.16□□□□□ -2.06
HOXA9P31269 RPF2P2-201ENST00000504693 896 ntBASIC2.16□□□□□ -2.06
HOXA9P31269 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.16□□□□□ -2.06
HOXA9P31269 DEFB108A-201ENST00000530110 222 ntBASIC2.16□□□□□ -2.06
HOXA9P31269 AC007834.2-201ENST00000536310 343 ntBASIC2.16□□□□□ -2.06
HOXA9P31269 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.16□□□□□ -2.06
HOXA9P31269 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.16□□□□□ -2.06
HOXA9P31269 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.16□□□□□ -2.06
HOXA9P31269 MIR3146-201ENST00000580367 79 ntBASIC2.16□□□□□ -2.06
HOXA9P31269 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.16□□□□□ -2.06
HOXA9P31269 AC012065.4-201ENST00000602445 679 ntBASIC2.16□□□□□ -2.06
HOXA9P31269 AL031775.1-201ENST00000607014 887 ntBASIC2.16□□□□□ -2.06
HOXA9P31269 AC068057.2-201ENST00000624047 895 ntBASIC2.16□□□□□ -2.06
HOXA9P31269 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HOXA9P31269 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
HOXA9P31269 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.15□□□□□ -2.06
HOXA9P31269 AC007785.2-201ENST00000598627 1916 ntBASIC2.15□□□□□ -2.06
HOXA9P31269 MTND4P27-201ENST00000450813 1354 ntBASIC2.15□□□□□ -2.07
HOXA9P31269 RNU4-21P-201ENST00000362802 126 ntBASIC2.15□□□□□ -2.07
HOXA9P31269 RNU5A-8P-201ENST00000364102 114 ntBASIC2.15□□□□□ -2.07
HOXA9P31269 AL359634.1-202ENST00000404721 284 ntBASIC2.15□□□□□ -2.07
HOXA9P31269 SNORD23.1-201ENST00000408212 104 ntBASIC2.15□□□□□ -2.07
HOXA9P31269 Y_RNA.608-201ENST00000410647 95 ntBASIC2.15□□□□□ -2.07
HOXA9P31269 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.15□□□□□ -2.07
HOXA9P31269 AC092047.1-201ENST00000424997 240 ntBASIC2.15□□□□□ -2.07
HOXA9P31269 WARS2P1-201ENST00000429678 537 ntBASIC2.15□□□□□ -2.07
HOXA9P31269 CETN4P-201ENST00000432407 469 ntBASIC2.15□□□□□ -2.07
HOXA9P31269 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.15□□□□□ -2.07
HOXA9P31269 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.15□□□□□ -2.07
HOXA9P31269 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.15□□□□□ -2.07
HOXA9P31269 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.15□□□□□ -2.07
HOXA9P31269 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.15□□□□□ -2.07
HOXA9P31269 MTND3P7-201ENST00000474435 343 ntBASIC2.15□□□□□ -2.07
HOXA9P31269 BET1P1-201ENST00000482276 359 ntBASIC2.15□□□□□ -2.07
HOXA9P31269 RPL23AP41-201ENST00000484754 458 ntBASIC2.15□□□□□ -2.07
HOXA9P31269 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.15□□□□□ -2.07
HOXA9P31269 GZMAP1-201ENST00000503054 631 ntBASIC2.15□□□□□ -2.07
HOXA9P31269 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.15□□□□□ -2.07
HOXA9P31269 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.15□□□□□ -2.07
HOXA9P31269 AC114797.1-201ENST00000514003 728 ntBASIC2.15□□□□□ -2.07
HOXA9P31269 SCARNA11.3-201ENST00000517276 130 ntBASIC2.15□□□□□ -2.07
HOXA9P31269 AC022616.6-201ENST00000520479 119 ntBASIC2.15□□□□□ -2.07
HOXA9P31269 AP002748.2-201ENST00000528671 348 ntBASIC2.15□□□□□ -2.07
HOXA9P31269 AP003181.2-201ENST00000528941 181 ntBASIC2.15□□□□□ -2.07
HOXA9P31269 AP003122.4-201ENST00000530980 758 ntBASIC2.15□□□□□ -2.07
HOXA9P31269 CYCSP26-201ENST00000534107 320 ntBASIC2.15□□□□□ -2.07
HOXA9P31269 OSBPL9P5-201ENST00000542581 171 ntBASIC2.15□□□□□ -2.07
HOXA9P31269 MRPS36P5-201ENST00000551909 298 ntBASIC2.15□□□□□ -2.07
HOXA9P31269 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.15□□□□□ -2.07
HOXA9P31269 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.15□□□□□ -2.07
HOXA9P31269 MIR548AB-201ENST00000584917 84 ntBASIC2.15□□□□□ -2.07
HOXA9P31269 KC877982.1-201ENST00000602313 470 ntBASIC2.15□□□□□ -2.07
HOXA9P31269 AP001981.2-201ENST00000603241 418 ntBASIC2.15□□□□□ -2.07
HOXA9P31269 AC092354.1-201ENST00000606057 376 ntBASIC2.15□□□□□ -2.07
HOXA9P31269 MIR6845-201ENST00000613182 61 ntBASIC2.15□□□□□ -2.07
HOXA9P31269 AC092140.2-201ENST00000618027 521 ntBASIC2.15□□□□□ -2.07
HOXA9P31269 AL031601.2-202ENST00000622650 282 ntBASIC2.15□□□□□ -2.07
HOXA9P31269 AC091953.2-201ENST00000623979 160 ntBASIC2.15□□□□□ -2.07
HOXA9P31269 MTND1P37-201ENST00000636562 264 ntBASIC2.15□□□□□ -2.07
HOXA9P31269 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
HOXA9P31269 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.15□□□□□ -2.07
HOXA9P31269 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.15□□□□□ -2.07
HOXA9P31269 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
HOXA9P31269 RNU6-1159P-201ENST00000362933 107 ntBASIC2.14□□□□□ -2.07
HOXA9P31269 SNORA3A-201ENST00000364113 130 ntBASIC2.14□□□□□ -2.07
HOXA9P31269 RNU5E-5P-201ENST00000365379 116 ntBASIC2.14□□□□□ -2.07
HOXA9P31269 SNORD116-8-201ENST00000384365 95 ntBASIC2.14□□□□□ -2.07
HOXA9P31269 MIR583-201ENST00000384846 75 ntBASIC2.14□□□□□ -2.07
HOXA9P31269 U3.40-201ENST00000408706 208 ntBASIC2.14□□□□□ -2.07
HOXA9P31269 AL139156.1-201ENST00000412785 841 ntBASIC2.14□□□□□ -2.07
HOXA9P31269 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.14□□□□□ -2.07
HOXA9P31269 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.14□□□□□ -2.07
HOXA9P31269 CYCSP46-201ENST00000423569 204 ntBASIC2.14□□□□□ -2.07
HOXA9P31269 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.14□□□□□ -2.07
HOXA9P31269 AL356583.2-201ENST00000426536 280 ntBASIC2.14□□□□□ -2.07
HOXA9P31269 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.14□□□□□ -2.07
HOXA9P31269 MTATP6P17-201ENST00000431030 672 ntBASIC2.14□□□□□ -2.07
HOXA9P31269 USP12PX-201ENST00000432383 1057 ntBASIC2.14□□□□□ -2.07
HOXA9P31269 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.14□□□□□ -2.07
HOXA9P31269 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.14□□□□□ -2.07
HOXA9P31269 MTND1P30-201ENST00000441241 901 ntBASIC2.14□□□□□ -2.07
HOXA9P31269 UBE2D3P4-201ENST00000441973 436 ntBASIC2.14□□□□□ -2.07
HOXA9P31269 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.14□□□□□ -2.07
HOXA9P31269 AC020550.1-201ENST00000447385 163 ntBASIC2.14□□□□□ -2.07
HOXA9P31269 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.14□□□□□ -2.07
HOXA9P31269 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.14□□□□□ -2.07
HOXA9P31269 PSPHP1-201ENST00000450062 261 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms