Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AL356585.4-201ENST00000623078 1229 ntBASIC0.63□□□□□ -2.31
CLIP1P30622 Z99571.1-201ENST00000636677 394 ntBASIC0.63□□□□□ -2.31
CLIP1P30622 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC0.62□□□□□ -2.31
CLIP1P30622 RNU6-733P-201ENST00000410759 104 ntBASIC0.62□□□□□ -2.31
CLIP1P30622 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.62□□□□□ -2.31
CLIP1P30622 PIGFP2-201ENST00000421400 651 ntBASIC0.62□□□□□ -2.31
CLIP1P30622 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.62□□□□□ -2.31
CLIP1P30622 RNU6-420P-201ENST00000458780 107 ntBASIC0.62□□□□□ -2.31
CLIP1P30622 AL133373.1-201ENST00000497098 94 ntBASIC0.62□□□□□ -2.31
CLIP1P30622 AF213884.2-201ENST00000510417 903 ntBASIC0.62□□□□□ -2.31
CLIP1P30622 AC008494.2-201ENST00000514544 370 ntBASIC0.62□□□□□ -2.31
CLIP1P30622 RNA5SP112-201ENST00000515937 99 ntBASIC0.62□□□□□ -2.31
CLIP1P30622 RNA5SP404-201ENST00000517118 132 ntBASIC0.62□□□□□ -2.31
CLIP1P30622 PTK2-220ENST00000520151 573 ntTSL 4 BASIC0.62□□□□□ -2.31
CLIP1P30622 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.62□□□□□ -2.31
CLIP1P30622 Z69720.2-201ENST00000624755 279 ntBASIC0.62□□□□□ -2.31
CLIP1P30622 OR5H6-203ENST00000642105 978 ntBASIC0.62□□□□□ -2.31
CLIP1P30622 AL391516.1-201ENST00000554380 2449 ntBASIC0.62□□□□□ -2.31
CLIP1P30622 Y_RNA.274-201ENST00000364714 101 ntBASIC0.61□□□□□ -2.31
CLIP1P30622 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
CLIP1P30622 RNA5SP63-201ENST00000391225 112 ntBASIC0.61□□□□□ -2.31
CLIP1P30622 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC0.61□□□□□ -2.31
CLIP1P30622 AL035410.1-201ENST00000427409 427 ntBASIC0.61□□□□□ -2.31
CLIP1P30622 RPL36P19-201ENST00000430744 301 ntBASIC0.61□□□□□ -2.31
CLIP1P30622 NDUFA5P10-201ENST00000432147 357 ntBASIC0.61□□□□□ -2.31
CLIP1P30622 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC0.61□□□□□ -2.31
CLIP1P30622 SNRPEP7-201ENST00000438350 220 ntBASIC0.61□□□□□ -2.31
CLIP1P30622 AC073614.1-201ENST00000438690 650 ntBASIC0.61□□□□□ -2.31
CLIP1P30622 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.61□□□□□ -2.31
CLIP1P30622 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC0.61□□□□□ -2.31
CLIP1P30622 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.61□□□□□ -2.31
CLIP1P30622 MTCYBP22-201ENST00000603788 447 ntBASIC0.61□□□□□ -2.31
CLIP1P30622 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
CLIP1P30622 AC099842.1-201ENST00000619919 596 ntBASIC0.61□□□□□ -2.31
CLIP1P30622 AC073308.1-201ENST00000623696 305 ntBASIC0.61□□□□□ -2.31
CLIP1P30622 RNU6-748P-201ENST00000384648 107 ntBASIC0.6□□□□□ -2.31
CLIP1P30622 NDUFS5P1-201ENST00000405668 289 ntBASIC0.6□□□□□ -2.31
CLIP1P30622 VN1R42P-201ENST00000424651 344 ntBASIC0.6□□□□□ -2.31
CLIP1P30622 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.6□□□□□ -2.31
CLIP1P30622 ZNF736P6Y-201ENST00000447526 1213 ntBASIC0.6□□□□□ -2.31
CLIP1P30622 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.6□□□□□ -2.31
CLIP1P30622 PRELID3BP1-201ENST00000457142 540 ntBASIC0.6□□□□□ -2.31
CLIP1P30622 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.6□□□□□ -2.31
CLIP1P30622 AC109927.2-201ENST00000506416 303 ntBASIC0.6□□□□□ -2.31
CLIP1P30622 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC0.6□□□□□ -2.31
CLIP1P30622 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.6□□□□□ -2.31
CLIP1P30622 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.6□□□□□ -2.31
CLIP1P30622 AC004492.1-201ENST00000607036 742 ntBASIC0.6□□□□□ -2.31
CLIP1P30622 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.59□□□□□ -2.31
CLIP1P30622 MIR10B-201ENST00000385011 110 ntBASIC0.59□□□□□ -2.31
CLIP1P30622 NDUFB4P7-201ENST00000423198 363 ntBASIC0.59□□□□□ -2.31
CLIP1P30622 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.59□□□□□ -2.31
CLIP1P30622 RPL30P6-201ENST00000475925 342 ntBASIC0.59□□□□□ -2.31
CLIP1P30622 AP003122.4-201ENST00000530980 758 ntBASIC0.59□□□□□ -2.31
CLIP1P30622 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.59□□□□□ -2.31
CLIP1P30622 AC090115.3-201ENST00000553218 849 ntBASIC0.59□□□□□ -2.31
CLIP1P30622 AC233702.2-202ENST00000562547 291 ntBASIC0.59□□□□□ -2.31
CLIP1P30622 AC008121.1-201ENST00000603244 268 ntBASIC0.59□□□□□ -2.31
CLIP1P30622 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.59□□□□□ -2.31
CLIP1P30622 MTND4P8-201ENST00000514997 1362 ntBASIC0.59□□□□□ -2.32
CLIP1P30622 MIR518A2-201ENST00000384966 87 ntBASIC0.58□□□□□ -2.32
CLIP1P30622 AC097463.2-201ENST00000421074 142 ntBASIC0.58□□□□□ -2.32
CLIP1P30622 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.58□□□□□ -2.32
CLIP1P30622 AL035666.1-201ENST00000446195 348 ntBASIC0.58□□□□□ -2.32
CLIP1P30622 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.58□□□□□ -2.32
CLIP1P30622 SNORA62.5-201ENST00000516634 120 ntBASIC0.58□□□□□ -2.32
CLIP1P30622 RNU6-798P-201ENST00000516912 103 ntBASIC0.58□□□□□ -2.32
CLIP1P30622 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.58□□□□□ -2.32
CLIP1P30622 MTCYBP27-201ENST00000555160 670 ntBASIC0.58□□□□□ -2.32
CLIP1P30622 HMGN1P30-201ENST00000589286 268 ntBASIC0.58□□□□□ -2.32
CLIP1P30622 AC012669.1-201ENST00000603209 283 ntBASIC0.58□□□□□ -2.32
CLIP1P30622 AP000654.2-201ENST00000605633 586 ntBASIC0.58□□□□□ -2.32
CLIP1P30622 AC093838.1-201ENST00000613014 469 ntBASIC0.58□□□□□ -2.32
CLIP1P30622 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.58□□□□□ -2.32
CLIP1P30622 SNORA63.3-201ENST00000362682 132 ntBASIC0.57□□□□□ -2.32
CLIP1P30622 RNU6-115P-201ENST00000364310 107 ntBASIC0.57□□□□□ -2.32
CLIP1P30622 RNU6-26P-201ENST00000383985 107 ntBASIC0.57□□□□□ -2.32
CLIP1P30622 AL136372.1-201ENST00000403060 228 ntBASIC0.57□□□□□ -2.32
CLIP1P30622 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.57□□□□□ -2.32
CLIP1P30622 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.57□□□□□ -2.32
CLIP1P30622 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC0.57□□□□□ -2.32
CLIP1P30622 AC112492.4-201ENST00000456549 352 ntBASIC0.57□□□□□ -2.32
CLIP1P30622 HMGN1P10-201ENST00000474557 553 ntBASIC0.57□□□□□ -2.32
CLIP1P30622 AC092470.1-201ENST00000546187 132 ntBASIC0.57□□□□□ -2.32
CLIP1P30622 AP003973.1-201ENST00000604639 691 ntBASIC0.57□□□□□ -2.32
CLIP1P30622 AL365204.3-201ENST00000612448 685 ntBASIC0.57□□□□□ -2.32
CLIP1P30622 AC104763.3-201ENST00000613765 618 ntBASIC0.57□□□□□ -2.32
CLIP1P30622 MTND4P16-201ENST00000466108 1367 ntBASIC0.56□□□□□ -2.32
CLIP1P30622 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC0.56□□□□□ -2.32
CLIP1P30622 RNU6-1035P-201ENST00000384477 107 ntBASIC0.56□□□□□ -2.32
CLIP1P30622 AL031577.2-201ENST00000404133 280 ntBASIC0.56□□□□□ -2.32
CLIP1P30622 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
CLIP1P30622 RPL30P7-201ENST00000479312 323 ntBASIC0.56□□□□□ -2.32
CLIP1P30622 RNF138P1-201ENST00000502765 546 ntBASIC0.56□□□□□ -2.32
CLIP1P30622 SCARNA16.2-201ENST00000516520 172 ntBASIC0.56□□□□□ -2.32
CLIP1P30622 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
CLIP1P30622 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC0.56□□□□□ -2.32
CLIP1P30622 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.56□□□□□ -2.32
CLIP1P30622 AC069294.1-201ENST00000608397 350 ntBASIC0.56□□□□□ -2.32
CLIP1P30622 AP000254.1-201ENST00000609934 520 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms