Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.96□□□□□ -1.94
BDNFP23560 AC091304.9-201ENST00000612091 226 ntBASIC2.96□□□□□ -1.94
BDNFP23560 AP001506.1-201ENST00000615444 211 ntBASIC2.96□□□□□ -1.94
BDNFP23560 MIR6852-201ENST00000621699 66 ntBASIC2.96□□□□□ -1.94
BDNFP23560 AL157786.1-207ENST00000627771 695 ntBASIC2.96□□□□□ -1.94
BDNFP23560 MIR6733-201ENST00000635723 61 ntBASIC2.96□□□□□ -1.94
BDNFP23560 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
BDNFP23560 FARSBP1-201ENST00000435808 1778 ntBASIC2.96□□□□□ -1.94
BDNFP23560 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
BDNFP23560 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
BDNFP23560 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
BDNFP23560 RNU1-112P-201ENST00000364401 164 ntBASIC2.95□□□□□ -1.94
BDNFP23560 RNU4-91P-201ENST00000364778 135 ntBASIC2.95□□□□□ -1.94
BDNFP23560 RNU6-487P-201ENST00000365430 104 ntBASIC2.95□□□□□ -1.94
BDNFP23560 SNORA24.1-201ENST00000384401 135 ntBASIC2.95□□□□□ -1.94
BDNFP23560 AL049545.1-201ENST00000401856 572 ntBASIC2.95□□□□□ -1.94
BDNFP23560 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.95□□□□□ -1.94
BDNFP23560 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.95□□□□□ -1.94
BDNFP23560 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.95□□□□□ -1.94
BDNFP23560 RPS6P15-201ENST00000431996 751 ntBASIC2.95□□□□□ -1.94
BDNFP23560 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.95□□□□□ -1.94
BDNFP23560 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.95□□□□□ -1.94
BDNFP23560 RPS3P1-201ENST00000456781 192 ntBASIC2.95□□□□□ -1.94
BDNFP23560 AC126389.1-201ENST00000477436 290 ntBASIC2.95□□□□□ -1.94
BDNFP23560 AC011005.2-201ENST00000487324 359 ntBASIC2.95□□□□□ -1.94
BDNFP23560 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.95□□□□□ -1.94
BDNFP23560 AC116562.3-201ENST00000506136 177 ntBASIC2.95□□□□□ -1.94
BDNFP23560 AC112206.3-201ENST00000514578 389 ntBASIC2.95□□□□□ -1.94
BDNFP23560 RNU6-410P-201ENST00000517006 107 ntBASIC2.95□□□□□ -1.94
BDNFP23560 AC109329.1-201ENST00000518744 317 ntBASIC2.95□□□□□ -1.94
BDNFP23560 AC068587.5-201ENST00000528506 175 ntBASIC2.95□□□□□ -1.94
BDNFP23560 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.95□□□□□ -1.94
BDNFP23560 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.95□□□□□ -1.94
BDNFP23560 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.95□□□□□ -1.94
BDNFP23560 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.95□□□□□ -1.94
BDNFP23560 AC063944.3-201ENST00000609969 533 ntBASIC2.95□□□□□ -1.94
BDNFP23560 AL020991.1-201ENST00000612314 373 ntBASIC2.95□□□□□ -1.94
BDNFP23560 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.95□□□□□ -1.94
BDNFP23560 AC010297.1-201ENST00000623948 149 ntBASIC2.95□□□□□ -1.94
BDNFP23560 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
BDNFP23560 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
BDNFP23560 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
BDNFP23560 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
BDNFP23560 OR4G2P-201ENST00000328113 903 ntBASIC2.94□□□□□ -1.94
BDNFP23560 RNY4P34-201ENST00000364779 95 ntBASIC2.94□□□□□ -1.94
BDNFP23560 MIR10A-201ENST00000385043 110 ntBASIC2.94□□□□□ -1.94
BDNFP23560 AL138827.1-201ENST00000402666 306 ntBASIC2.94□□□□□ -1.94
BDNFP23560 RAP1BP3-201ENST00000407180 549 ntBASIC2.94□□□□□ -1.94
BDNFP23560 HMGN1P14-201ENST00000412459 517 ntBASIC2.94□□□□□ -1.94
BDNFP23560 AC114491.1-201ENST00000416095 246 ntBASIC2.94□□□□□ -1.94
BDNFP23560 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.94□□□□□ -1.94
BDNFP23560 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.94□□□□□ -1.94
BDNFP23560 PGBD4P3-201ENST00000440731 581 ntBASIC2.94□□□□□ -1.94
BDNFP23560 AL161788.1-201ENST00000441805 169 ntBASIC2.94□□□□□ -1.94
BDNFP23560 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
BDNFP23560 ART2BP-201ENST00000453501 499 ntBASIC2.94□□□□□ -1.94
BDNFP23560 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.94□□□□□ -1.94
BDNFP23560 AP004217.1-201ENST00000480579 346 ntBASIC2.94□□□□□ -1.94
BDNFP23560 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.94□□□□□ -1.94
BDNFP23560 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.94□□□□□ -1.94
BDNFP23560 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.94□□□□□ -1.94
BDNFP23560 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.94□□□□□ -1.94
BDNFP23560 RNU2-46P-201ENST00000517038 113 ntBASIC2.94□□□□□ -1.94
BDNFP23560 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.94□□□□□ -1.94
BDNFP23560 RPL7P20-201ENST00000520308 745 ntBASIC2.94□□□□□ -1.94
BDNFP23560 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.94□□□□□ -1.94
BDNFP23560 OR4R1P-201ENST00000529879 463 ntBASIC2.94□□□□□ -1.94
BDNFP23560 AC105137.2-201ENST00000569073 466 ntBASIC2.94□□□□□ -1.94
BDNFP23560 AC009127.3-201ENST00000570531 403 ntBASIC2.94□□□□□ -1.94
BDNFP23560 MIR4319-201ENST00000577285 85 ntBASIC2.94□□□□□ -1.94
BDNFP23560 AC078899.2-201ENST00000595282 212 ntBASIC2.94□□□□□ -1.94
BDNFP23560 AC090115.4-201ENST00000609970 188 ntBASIC2.94□□□□□ -1.94
BDNFP23560 AC069234.5-201ENST00000611056 416 ntBASIC2.94□□□□□ -1.94
BDNFP23560 AC011890.2-201ENST00000613393 294 ntBASIC2.94□□□□□ -1.94
BDNFP23560 AC025034.2-201ENST00000623264 286 ntBASIC2.94□□□□□ -1.94
BDNFP23560 AC007494.3-201ENST00000624660 743 ntBASIC2.94□□□□□ -1.94
BDNFP23560 U6.114-201ENST00000636407 96 ntBASIC2.94□□□□□ -1.94
BDNFP23560 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
BDNFP23560 MTND5P17-201ENST00000418405 1603 ntBASIC2.93□□□□□ -1.94
BDNFP23560 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.93□□□□□ -1.94
BDNFP23560 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.93□□□□□ -1.94
BDNFP23560 RNU6-1179P-201ENST00000384667 107 ntBASIC2.93□□□□□ -1.94
BDNFP23560 MIR181A2-201ENST00000384863 110 ntBASIC2.93□□□□□ -1.94
BDNFP23560 CIR1P3-201ENST00000405137 479 ntBASIC2.93□□□□□ -1.94
BDNFP23560 AC016831.2-201ENST00000417179 352 ntBASIC2.93□□□□□ -1.94
BDNFP23560 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.93□□□□□ -1.94
BDNFP23560 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.93□□□□□ -1.94
BDNFP23560 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.93□□□□□ -1.94
BDNFP23560 AC073901.1-201ENST00000462471 408 ntBASIC2.93□□□□□ -1.94
BDNFP23560 AC022493.1-201ENST00000492984 337 ntBASIC2.93□□□□□ -1.94
BDNFP23560 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC2.93□□□□□ -1.94
BDNFP23560 AC118273.2-201ENST00000532092 465 ntBASIC2.93□□□□□ -1.94
BDNFP23560 LRRC34P1-201ENST00000542742 915 ntBASIC2.93□□□□□ -1.94
BDNFP23560 CR383656.8-201ENST00000549046 145 ntBASIC2.93□□□□□ -1.94
BDNFP23560 MIR3915-201ENST00000578518 97 ntBASIC2.93□□□□□ -1.94
BDNFP23560 ZNF861P-201ENST00000588126 639 ntBASIC2.93□□□□□ -1.94
BDNFP23560 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
BDNFP23560 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.93□□□□□ -1.94
BDNFP23560 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.93□□□□□ -1.94
BDNFP23560 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms