Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.3□□□□□ -2.2
CCL1P22362 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.3□□□□□ -2.2
CCL1P22362 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.3□□□□□ -2.2
CCL1P22362 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.3□□□□□ -2.2
CCL1P22362 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.3□□□□□ -2.2
CCL1P22362 HMGN2P3-201ENST00000433603 273 ntBASIC1.3□□□□□ -2.2
CCL1P22362 HMGN2P5-201ENST00000436882 273 ntBASIC1.3□□□□□ -2.2
CCL1P22362 BTBD7P2-201ENST00000441962 620 ntBASIC1.3□□□□□ -2.2
CCL1P22362 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.3□□□□□ -2.2
CCL1P22362 AC245102.2-201ENST00000448956 180 ntBASIC1.3□□□□□ -2.2
CCL1P22362 RNU7-59P-201ENST00000459101 61 ntBASIC1.3□□□□□ -2.2
CCL1P22362 AC011005.2-201ENST00000487324 359 ntBASIC1.3□□□□□ -2.2
CCL1P22362 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
CCL1P22362 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.3□□□□□ -2.2
CCL1P22362 SNORA31.3-201ENST00000516029 96 ntBASIC1.3□□□□□ -2.2
CCL1P22362 RNU6-1028P-201ENST00000517164 93 ntBASIC1.3□□□□□ -2.2
CCL1P22362 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.3□□□□□ -2.2
CCL1P22362 AP003049.1-201ENST00000529418 457 ntBASIC1.3□□□□□ -2.2
CCL1P22362 OR5B19P-201ENST00000531766 928 ntBASIC1.3□□□□□ -2.2
CCL1P22362 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.3□□□□□ -2.2
CCL1P22362 MTCYBP23-201ENST00000558717 1102 ntBASIC1.3□□□□□ -2.2
CCL1P22362 AL132657.2-201ENST00000564417 358 ntBASIC1.3□□□□□ -2.2
CCL1P22362 AL512347.1-201ENST00000566420 503 ntBASIC1.3□□□□□ -2.2
CCL1P22362 AC126365.2-201ENST00000580630 379 ntBASIC1.3□□□□□ -2.2
CCL1P22362 AC021171.1-201ENST00000603137 706 ntBASIC1.3□□□□□ -2.2
CCL1P22362 DPPA3P3-201ENST00000603842 430 ntBASIC1.3□□□□□ -2.2
CCL1P22362 ELOCP5-201ENST00000604924 333 ntBASIC1.3□□□□□ -2.2
CCL1P22362 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.3□□□□□ -2.2
CCL1P22362 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.3□□□□□ -2.2
CCL1P22362 U1.36-201ENST00000620684 176 ntBASIC1.3□□□□□ -2.2
CCL1P22362 PCMTD1P7-201ENST00000634506 357 ntBASIC1.3□□□□□ -2.2
CCL1P22362 Z99571.1-201ENST00000636677 394 ntBASIC1.3□□□□□ -2.2
CCL1P22362 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CCL1P22362 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CCL1P22362 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.29□□□□□ -2.2
CCL1P22362 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CCL1P22362 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CCL1P22362 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
CCL1P22362 AL590084.1-201ENST00000407885 387 ntBASIC1.29□□□□□ -2.2
CCL1P22362 MIR1304-201ENST00000408243 91 ntBASIC1.29□□□□□ -2.2
CCL1P22362 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CCL1P22362 USP9YP24-201ENST00000434374 697 ntBASIC1.29□□□□□ -2.2
CCL1P22362 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.29□□□□□ -2.2
CCL1P22362 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.29□□□□□ -2.2
CCL1P22362 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.29□□□□□ -2.2
CCL1P22362 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.29□□□□□ -2.2
CCL1P22362 MTCO2P25-201ENST00000447065 681 ntBASIC1.29□□□□□ -2.2
CCL1P22362 PAXBP1P1-201ENST00000449315 447 ntBASIC1.29□□□□□ -2.2
CCL1P22362 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.29□□□□□ -2.2
CCL1P22362 AC006512.1-201ENST00000468816 291 ntBASIC1.29□□□□□ -2.2
CCL1P22362 AC055855.1-201ENST00000489563 579 ntBASIC1.29□□□□□ -2.2
CCL1P22362 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.29□□□□□ -2.2
CCL1P22362 AC023194.1-201ENST00000493084 308 ntBASIC1.29□□□□□ -2.2
CCL1P22362 AC139453.3-201ENST00000493276 369 ntBASIC1.29□□□□□ -2.2
CCL1P22362 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.29□□□□□ -2.2
CCL1P22362 FAM92A1P2-202ENST00000504766 877 ntBASIC1.29□□□□□ -2.2
CCL1P22362 Y_RNA.675-201ENST00000516389 149 ntBASIC1.29□□□□□ -2.2
CCL1P22362 AP003355.1-201ENST00000518956 587 ntBASIC1.29□□□□□ -2.2
CCL1P22362 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.29□□□□□ -2.2
CCL1P22362 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.29□□□□□ -2.2
CCL1P22362 MIR4285-201ENST00000581001 85 ntBASIC1.29□□□□□ -2.2
CCL1P22362 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.29□□□□□ -2.2
CCL1P22362 AC005776.1-201ENST00000603164 290 ntBASIC1.29□□□□□ -2.2
CCL1P22362 AL670379.10-201ENST00000604330 253 ntBASIC1.29□□□□□ -2.2
CCL1P22362 AL670379.9-201ENST00000605428 253 ntBASIC1.29□□□□□ -2.2
CCL1P22362 AP002802.2-201ENST00000605877 235 ntBASIC1.29□□□□□ -2.2
CCL1P22362 AL359314.1-201ENST00000616913 261 ntBASIC1.29□□□□□ -2.2
CCL1P22362 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.29□□□□□ -2.2
CCL1P22362 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.28□□□□□ -2.2
CCL1P22362 RNU6-188P-201ENST00000364207 107 ntBASIC1.28□□□□□ -2.2
CCL1P22362 Y_RNA.578-201ENST00000390903 88 ntBASIC1.28□□□□□ -2.2
CCL1P22362 AL591034.2-201ENST00000402839 359 ntBASIC1.28□□□□□ -2.2
CCL1P22362 MIR1323-201ENST00000408090 73 ntBASIC1.28□□□□□ -2.2
CCL1P22362 MTND4P3-201ENST00000417829 541 ntBASIC1.28□□□□□ -2.2
CCL1P22362 USP9YP21-201ENST00000420603 432 ntBASIC1.28□□□□□ -2.2
CCL1P22362 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.28□□□□□ -2.2
CCL1P22362 PGBD4P6-201ENST00000421501 610 ntBASIC1.28□□□□□ -2.2
CCL1P22362 AL953862.1-201ENST00000423016 168 ntBASIC1.28□□□□□ -2.2
CCL1P22362 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.28□□□□□ -2.2
CCL1P22362 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.28□□□□□ -2.2
CCL1P22362 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.28□□□□□ -2.2
CCL1P22362 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.28□□□□□ -2.2
CCL1P22362 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.28□□□□□ -2.2
CCL1P22362 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.28□□□□□ -2.2
CCL1P22362 AC023790.1-201ENST00000482174 347 ntBASIC1.28□□□□□ -2.2
CCL1P22362 RPL23AP94-201ENST00000512518 302 ntBASIC1.28□□□□□ -2.2
CCL1P22362 RNY4P37-201ENST00000516225 96 ntBASIC1.28□□□□□ -2.2
CCL1P22362 RNU6-678P-201ENST00000516832 109 ntBASIC1.28□□□□□ -2.2
CCL1P22362 AC022880.1-201ENST00000534017 973 ntBASIC1.28□□□□□ -2.2
CCL1P22362 UBE2L4-201ENST00000587688 464 ntBASIC1.28□□□□□ -2.2
CCL1P22362 MTATP6P2-201ENST00000603319 678 ntBASIC1.28□□□□□ -2.2
CCL1P22362 AC103810.8-201ENST00000607347 118 ntBASIC1.28□□□□□ -2.2
CCL1P22362 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.28□□□□□ -2.2
CCL1P22362 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
CCL1P22362 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.27□□□□□ -2.21
CCL1P22362 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
CCL1P22362 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.27□□□□□ -2.21
CCL1P22362 RNU1-23P-201ENST00000363361 144 ntBASIC1.27□□□□□ -2.21
CCL1P22362 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
CCL1P22362 Y_RNA.408-201ENST00000383987 102 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms