Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 MIR23A-201ENST00000385245 73 ntBASIC4.73□□□□□ -1.65
ERCC3P19447 MIR513A2-201ENST00000385249 127 ntBASIC4.73□□□□□ -1.65
ERCC3P19447 AL138878.1-201ENST00000405131 347 ntBASIC4.73□□□□□ -1.65
ERCC3P19447 MIR1179-201ENST00000408703 91 ntBASIC4.73□□□□□ -1.65
ERCC3P19447 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.73□□□□□ -1.65
ERCC3P19447 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.73□□□□□ -1.65
ERCC3P19447 AL691449.1-201ENST00000426570 421 ntBASIC4.73□□□□□ -1.65
ERCC3P19447 AC087650.1-201ENST00000431445 468 ntBASIC4.73□□□□□ -1.65
ERCC3P19447 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.73□□□□□ -1.65
ERCC3P19447 SNORA71B-202ENST00000439232 272 ntBASIC4.73□□□□□ -1.65
ERCC3P19447 MTCYBP6-201ENST00000441810 138 ntBASIC4.73□□□□□ -1.65
ERCC3P19447 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.73□□□□□ -1.65
ERCC3P19447 SSXP4-201ENST00000451349 245 ntBASIC4.73□□□□□ -1.65
ERCC3P19447 Y_RNA.639-201ENST00000458981 102 ntBASIC4.73□□□□□ -1.65
ERCC3P19447 snoU13.22-201ENST00000459428 104 ntBASIC4.73□□□□□ -1.65
ERCC3P19447 AC133134.1-201ENST00000466800 359 ntBASIC4.73□□□□□ -1.65
ERCC3P19447 RPS26P15-201ENST00000488067 348 ntBASIC4.73□□□□□ -1.65
ERCC3P19447 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.73□□□□□ -1.65
ERCC3P19447 RNU6-264P-201ENST00000517134 104 ntBASIC4.73□□□□□ -1.65
ERCC3P19447 IGKV2-23-201ENST00000518729 323 ntBASIC4.73□□□□□ -1.65
ERCC3P19447 AC012468.1-201ENST00000604888 430 ntBASIC4.73□□□□□ -1.65
ERCC3P19447 AC018889.1-201ENST00000605372 397 ntBASIC4.73□□□□□ -1.65
ERCC3P19447 AC040896.1-201ENST00000613819 479 ntBASIC4.73□□□□□ -1.65
ERCC3P19447 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.73□□□□□ -1.65
ERCC3P19447 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.73□□□□□ -1.65
ERCC3P19447 AC098657.3-201ENST00000620434 263 ntBASIC4.73□□□□□ -1.65
ERCC3P19447 CR392039.5-201ENST00000623201 510 ntBASIC4.73□□□□□ -1.65
ERCC3P19447 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.73□□□□□ -1.65
ERCC3P19447 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
ERCC3P19447 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ERCC3P19447 MTND5P7-201ENST00000413558 1798 ntBASIC4.73□□□□□ -1.65
ERCC3P19447 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
ERCC3P19447 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
ERCC3P19447 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.72□□□□□ -1.65
ERCC3P19447 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.72□□□□□ -1.65
ERCC3P19447 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ERCC3P19447 SNORA71.3-201ENST00000362582 128 ntBASIC4.72□□□□□ -1.65
ERCC3P19447 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
ERCC3P19447 Z98749.2-208ENST00000381646 500 ntBASIC4.72□□□□□ -1.65
ERCC3P19447 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
ERCC3P19447 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.72□□□□□ -1.65
ERCC3P19447 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.72□□□□□ -1.65
ERCC3P19447 AL159169.1-201ENST00000421119 127 ntBASIC4.72□□□□□ -1.65
ERCC3P19447 GOT2P5-201ENST00000433995 546 ntBASIC4.72□□□□□ -1.65
ERCC3P19447 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.72□□□□□ -1.65
ERCC3P19447 AL500522.2-201ENST00000448562 343 ntBASIC4.72□□□□□ -1.65
ERCC3P19447 AC012308.1-201ENST00000451232 178 ntBASIC4.72□□□□□ -1.65
ERCC3P19447 AC006026.2-201ENST00000457376 180 ntBASIC4.72□□□□□ -1.65
ERCC3P19447 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.72□□□□□ -1.65
ERCC3P19447 RNA5SP384-201ENST00000516615 116 ntBASIC4.72□□□□□ -1.65
ERCC3P19447 AP004607.1-201ENST00000524456 203 ntBASIC4.72□□□□□ -1.65
ERCC3P19447 AP000867.2-201ENST00000532468 320 ntBASIC4.72□□□□□ -1.65
ERCC3P19447 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.72□□□□□ -1.65
ERCC3P19447 NACAP3-201ENST00000552100 481 ntBASIC4.72□□□□□ -1.65
ERCC3P19447 SNRPGP18-201ENST00000553000 214 ntBASIC4.72□□□□□ -1.65
ERCC3P19447 AC020914.4-201ENST00000597690 277 ntBASIC4.72□□□□□ -1.65
ERCC3P19447 AL391261.4-201ENST00000616012 481 ntBASIC4.72□□□□□ -1.65
ERCC3P19447 AC006111.3-201ENST00000622137 383 ntBASIC4.72□□□□□ -1.65
ERCC3P19447 AL732372.2-225ENST00000642124 456 ntBASIC4.72□□□□□ -1.65
ERCC3P19447 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
ERCC3P19447 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
ERCC3P19447 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.72□□□□□ -1.65
ERCC3P19447 ZNF962P-201ENST00000443465 3140 ntBASIC4.72□□□□□ -1.65
ERCC3P19447 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
ERCC3P19447 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.71□□□□□ -1.66
ERCC3P19447 RNU6-78P-201ENST00000362897 107 ntBASIC4.71□□□□□ -1.66
ERCC3P19447 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.71□□□□□ -1.66
ERCC3P19447 RNU6-1280P-201ENST00000365211 107 ntBASIC4.71□□□□□ -1.66
ERCC3P19447 RNU6-1040P-201ENST00000383974 107 ntBASIC4.71□□□□□ -1.66
ERCC3P19447 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
ERCC3P19447 PTMAP5-201ENST00000393073 333 ntBASIC4.71□□□□□ -1.66
ERCC3P19447 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.71□□□□□ -1.66
ERCC3P19447 RNA5SP44-201ENST00000410446 133 ntBASIC4.71□□□□□ -1.66
ERCC3P19447 MTND3P9-201ENST00000429526 346 ntBASIC4.71□□□□□ -1.66
ERCC3P19447 AL133396.1-201ENST00000432048 687 ntBASIC4.71□□□□□ -1.66
ERCC3P19447 DAP3P1-201ENST00000441522 278 ntBASIC4.71□□□□□ -1.66
ERCC3P19447 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
ERCC3P19447 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.71□□□□□ -1.66
ERCC3P19447 AL133547.1-201ENST00000448546 220 ntBASIC4.71□□□□□ -1.66
ERCC3P19447 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.71□□□□□ -1.66
ERCC3P19447 RPS27AP10-201ENST00000496103 208 ntBASIC4.71□□□□□ -1.66
ERCC3P19447 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.71□□□□□ -1.66
ERCC3P19447 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.71□□□□□ -1.66
ERCC3P19447 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ERCC3P19447 AL451007.1-201ENST00000595491 289 ntBASIC4.71□□□□□ -1.66
ERCC3P19447 AC024220.1-201ENST00000603675 484 ntBASIC4.71□□□□□ -1.66
ERCC3P19447 HMGB1P50-201ENST00000605814 607 ntBASIC4.71□□□□□ -1.66
ERCC3P19447 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.71□□□□□ -1.66
ERCC3P19447 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.71□□□□□ -1.66
ERCC3P19447 AL354798.1-201ENST00000622505 329 ntBASIC4.71□□□□□ -1.66
ERCC3P19447 FP236240.3-201ENST00000623061 327 ntBASIC4.71□□□□□ -1.66
ERCC3P19447 AC012442.3-202ENST00000636742 206 ntBASIC4.71□□□□□ -1.66
ERCC3P19447 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.71□□□□□ -1.66
ERCC3P19447 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.71□□□□□ -1.66
ERCC3P19447 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ERCC3P19447 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ERCC3P19447 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.71□□□□□ -1.66
ERCC3P19447 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ERCC3P19447 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ERCC3P19447 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms