Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.73□□□□□ -1.97
PDGFRAP16234 AL121992.2-201ENST00000606262 256 ntBASIC2.73□□□□□ -1.97
PDGFRAP16234 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.73□□□□□ -1.97
PDGFRAP16234 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.73□□□□□ -1.97
PDGFRAP16234 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
PDGFRAP16234 AC004520.1-201ENST00000608362 1413 ntBASIC2.73□□□□□ -1.97
PDGFRAP16234 AL136360.1-201ENST00000503377 1900 ntBASIC2.73□□□□□ -1.97
PDGFRAP16234 Y_RNA.77-201ENST00000362962 107 ntBASIC2.72□□□□□ -1.97
PDGFRAP16234 Y_RNA.201-201ENST00000364052 96 ntBASIC2.72□□□□□ -1.97
PDGFRAP16234 RNU6-461P-201ENST00000364195 107 ntBASIC2.72□□□□□ -1.97
PDGFRAP16234 RNU6-166P-201ENST00000384371 107 ntBASIC2.72□□□□□ -1.97
PDGFRAP16234 Y_RNA.500-201ENST00000384466 111 ntBASIC2.72□□□□□ -1.97
PDGFRAP16234 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.72□□□□□ -1.97
PDGFRAP16234 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PDGFRAP16234 C1DP2-201ENST00000418167 426 ntBASIC2.72□□□□□ -1.97
PDGFRAP16234 RPL31P35-201ENST00000431058 377 ntBASIC2.72□□□□□ -1.97
PDGFRAP16234 GPR143P-201ENST00000434155 205 ntBASIC2.72□□□□□ -1.97
PDGFRAP16234 MTATP6P16-201ENST00000434543 526 ntBASIC2.72□□□□□ -1.97
PDGFRAP16234 AL445687.1-201ENST00000439946 251 ntBASIC2.72□□□□□ -1.97
PDGFRAP16234 AL031667.1-201ENST00000440222 725 ntBASIC2.72□□□□□ -1.97
PDGFRAP16234 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.72□□□□□ -1.97
PDGFRAP16234 AL078601.1-201ENST00000444542 271 ntBASIC2.72□□□□□ -1.97
PDGFRAP16234 MTND1P27-201ENST00000451117 902 ntBASIC2.72□□□□□ -1.97
PDGFRAP16234 AC116562.3-201ENST00000506136 177 ntBASIC2.72□□□□□ -1.97
PDGFRAP16234 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.72□□□□□ -1.97
PDGFRAP16234 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.72□□□□□ -1.97
PDGFRAP16234 RNU6-123P-201ENST00000516163 102 ntBASIC2.72□□□□□ -1.97
PDGFRAP16234 RNU6-410P-201ENST00000517006 107 ntBASIC2.72□□□□□ -1.97
PDGFRAP16234 AC068587.5-201ENST00000528506 175 ntBASIC2.72□□□□□ -1.97
PDGFRAP16234 MIR3162-201ENST00000581818 82 ntBASIC2.72□□□□□ -1.97
PDGFRAP16234 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.72□□□□□ -1.97
PDGFRAP16234 AL158032.1-201ENST00000605401 106 ntBASIC2.72□□□□□ -1.97
PDGFRAP16234 MIR98-201ENST00000606724 119 ntBASIC2.72□□□□□ -1.97
PDGFRAP16234 AC135507.1-201ENST00000607214 561 ntBASIC2.72□□□□□ -1.97
PDGFRAP16234 AC109347.2-201ENST00000610220 349 ntBASIC2.72□□□□□ -1.97
PDGFRAP16234 AC024940.5-201ENST00000622889 474 ntBASIC2.72□□□□□ -1.97
PDGFRAP16234 AC010329.5-201ENST00000623497 2174 ntBASIC2.72□□□□□ -1.97
PDGFRAP16234 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
PDGFRAP16234 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
PDGFRAP16234 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
PDGFRAP16234 RNU6-179P-201ENST00000363350 107 ntBASIC2.71□□□□□ -1.98
PDGFRAP16234 RNU6-1097P-201ENST00000363586 107 ntBASIC2.71□□□□□ -1.98
PDGFRAP16234 RNU1-100P-201ENST00000365255 165 ntBASIC2.71□□□□□ -1.98
PDGFRAP16234 RNU6-108P-201ENST00000365558 107 ntBASIC2.71□□□□□ -1.98
PDGFRAP16234 RNU6-1083P-201ENST00000384022 107 ntBASIC2.71□□□□□ -1.98
PDGFRAP16234 MIR592-201ENST00000384959 97 ntBASIC2.71□□□□□ -1.98
PDGFRAP16234 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PDGFRAP16234 RPS4XP8-201ENST00000402039 771 ntBASIC2.71□□□□□ -1.98
PDGFRAP16234 RNU6-387P-201ENST00000411331 105 ntBASIC2.71□□□□□ -1.98
PDGFRAP16234 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.71□□□□□ -1.98
PDGFRAP16234 PIGFP2-201ENST00000421400 651 ntBASIC2.71□□□□□ -1.98
PDGFRAP16234 AL160275.3-201ENST00000423876 471 ntBASIC2.71□□□□□ -1.98
PDGFRAP16234 AC007560.1-201ENST00000426912 237 ntBASIC2.71□□□□□ -1.98
PDGFRAP16234 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.71□□□□□ -1.98
PDGFRAP16234 USP9YP29-201ENST00000445112 563 ntBASIC2.71□□□□□ -1.98
PDGFRAP16234 MTCYBP1-201ENST00000454315 1119 ntBASIC2.71□□□□□ -1.98
PDGFRAP16234 AC233279.1-201ENST00000455300 423 ntBASIC2.71□□□□□ -1.98
PDGFRAP16234 ARL2BPP4-201ENST00000506854 471 ntBASIC2.71□□□□□ -1.98
PDGFRAP16234 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.71□□□□□ -1.98
PDGFRAP16234 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.71□□□□□ -1.98
PDGFRAP16234 MTCO3P28-201ENST00000513351 515 ntBASIC2.71□□□□□ -1.98
PDGFRAP16234 RNA5SP282-201ENST00000516355 108 ntBASIC2.71□□□□□ -1.98
PDGFRAP16234 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.71□□□□□ -1.98
PDGFRAP16234 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.71□□□□□ -1.98
PDGFRAP16234 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
PDGFRAP16234 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.71□□□□□ -1.98
PDGFRAP16234 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.71□□□□□ -1.98
PDGFRAP16234 MIR3117-201ENST00000584034 78 ntBASIC2.71□□□□□ -1.98
PDGFRAP16234 AC008521.1-201ENST00000587471 187 ntBASIC2.71□□□□□ -1.98
PDGFRAP16234 AC098848.2-201ENST00000588023 330 ntBASIC2.71□□□□□ -1.98
PDGFRAP16234 AC040904.1-201ENST00000590850 223 ntBASIC2.71□□□□□ -1.98
PDGFRAP16234 AC126118.1-201ENST00000607744 628 ntBASIC2.71□□□□□ -1.98
PDGFRAP16234 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.71□□□□□ -1.98
PDGFRAP16234 AC025034.2-201ENST00000623264 286 ntBASIC2.71□□□□□ -1.98
PDGFRAP16234 AC092608.2-201ENST00000624427 218 ntBASIC2.71□□□□□ -1.98
PDGFRAP16234 AL157786.1-207ENST00000627771 695 ntBASIC2.71□□□□□ -1.98
PDGFRAP16234 FO624990.1-201ENST00000636373 85 ntBASIC2.71□□□□□ -1.98
PDGFRAP16234 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
PDGFRAP16234 Z82195.2-201ENST00000612348 18351 ntBASIC2.71□□□□□ -1.98
PDGFRAP16234 AC004944.1-201ENST00000517807 3059 ntBASIC2.71□□□□□ -1.98
PDGFRAP16234 MTND5P17-201ENST00000418405 1603 ntBASIC2.71□□□□□ -1.98
PDGFRAP16234 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.7□□□□□ -1.98
PDGFRAP16234 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
PDGFRAP16234 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.7□□□□□ -1.98
PDGFRAP16234 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
PDGFRAP16234 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
PDGFRAP16234 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.7□□□□□ -1.98
PDGFRAP16234 SNORD62.1-201ENST00000362541 86 ntBASIC2.7□□□□□ -1.98
PDGFRAP16234 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.7□□□□□ -1.98
PDGFRAP16234 RNU6-19P-201ENST00000384718 107 ntBASIC2.7□□□□□ -1.98
PDGFRAP16234 MIR518D-201ENST00000385014 87 ntBASIC2.7□□□□□ -1.98
PDGFRAP16234 RNU6-1328P-201ENST00000410938 106 ntBASIC2.7□□□□□ -1.98
PDGFRAP16234 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.7□□□□□ -1.98
PDGFRAP16234 BX295541.1-201ENST00000417774 250 ntBASIC2.7□□□□□ -1.98
PDGFRAP16234 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.7□□□□□ -1.98
PDGFRAP16234 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.7□□□□□ -1.98
PDGFRAP16234 KATNBL1P3-201ENST00000443475 909 ntBASIC2.7□□□□□ -1.98
PDGFRAP16234 GZMAP1-201ENST00000503054 631 ntBASIC2.7□□□□□ -1.98
PDGFRAP16234 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.7□□□□□ -1.98
PDGFRAP16234 RPL37P25-201ENST00000507308 276 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms