Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.74□□□□□ -2.13
TPM1P09493 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.74□□□□□ -2.13
TPM1P09493 AC099654.9-201ENST00000637055 678 ntBASIC1.74□□□□□ -2.13
TPM1P09493 AL356292.1-201ENST00000283110 373 ntBASIC1.73□□□□□ -2.13
TPM1P09493 MIR126-201ENST00000362291 85 ntBASIC1.73□□□□□ -2.13
TPM1P09493 U8.2-201ENST00000363156 134 ntBASIC1.73□□□□□ -2.13
TPM1P09493 RNU6-853P-201ENST00000364306 107 ntBASIC1.73□□□□□ -2.13
TPM1P09493 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.73□□□□□ -2.13
TPM1P09493 MTND4P3-201ENST00000417829 541 ntBASIC1.73□□□□□ -2.13
TPM1P09493 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.73□□□□□ -2.13
TPM1P09493 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.73□□□□□ -2.13
TPM1P09493 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.73□□□□□ -2.13
TPM1P09493 AC017099.1-201ENST00000448261 1028 ntBASIC1.73□□□□□ -2.13
TPM1P09493 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.73□□□□□ -2.13
TPM1P09493 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.73□□□□□ -2.13
TPM1P09493 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.73□□□□□ -2.13
TPM1P09493 RPL23AP63-201ENST00000498752 471 ntBASIC1.73□□□□□ -2.13
TPM1P09493 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.73□□□□□ -2.13
TPM1P09493 Y_RNA.675-201ENST00000516389 149 ntBASIC1.73□□□□□ -2.13
TPM1P09493 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.73□□□□□ -2.13
TPM1P09493 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.73□□□□□ -2.13
TPM1P09493 AL354943.1-201ENST00000572103 781 ntBASIC1.73□□□□□ -2.13
TPM1P09493 MIR3198-2-201ENST00000577868 80 ntBASIC1.73□□□□□ -2.13
TPM1P09493 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.73□□□□□ -2.13
TPM1P09493 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.73□□□□□ -2.13
TPM1P09493 RPL21P136-201ENST00000605378 396 ntBASIC1.73□□□□□ -2.13
TPM1P09493 AC112204.3-201ENST00000623822 332 ntBASIC1.73□□□□□ -2.13
TPM1P09493 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.73□□□□□ -2.13
TPM1P09493 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.72□□□□□ -2.13
TPM1P09493 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
TPM1P09493 SNORD115-3-201ENST00000363100 82 ntBASIC1.72□□□□□ -2.13
TPM1P09493 RNU6-898P-201ENST00000365627 104 ntBASIC1.72□□□□□ -2.13
TPM1P09493 MIR19A-201ENST00000384878 82 ntBASIC1.72□□□□□ -2.13
TPM1P09493 RN7SKP51-201ENST00000410781 304 ntBASIC1.72□□□□□ -2.13
TPM1P09493 AC007098.1-201ENST00000420122 367 ntBASIC1.72□□□□□ -2.13
TPM1P09493 HMGN2P3-201ENST00000433603 273 ntBASIC1.72□□□□□ -2.13
TPM1P09493 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.72□□□□□ -2.13
TPM1P09493 HMGN2P5-201ENST00000436882 273 ntBASIC1.72□□□□□ -2.13
TPM1P09493 PAXBP1P1-201ENST00000449315 447 ntBASIC1.72□□□□□ -2.13
TPM1P09493 RNU1-98P-201ENST00000458992 160 ntBASIC1.72□□□□□ -2.13
TPM1P09493 RNU6-586P-201ENST00000517265 104 ntBASIC1.72□□□□□ -2.13
TPM1P09493 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.72□□□□□ -2.13
TPM1P09493 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.72□□□□□ -2.13
TPM1P09493 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.72□□□□□ -2.13
TPM1P09493 RPL30P11-203ENST00000598995 310 ntBASIC1.72□□□□□ -2.13
TPM1P09493 AC096772.1-201ENST00000609146 564 ntBASIC1.72□□□□□ -2.13
TPM1P09493 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
TPM1P09493 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
TPM1P09493 MTND4P23-201ENST00000447723 1363 ntBASIC1.72□□□□□ -2.13
TPM1P09493 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.71□□□□□ -2.14
TPM1P09493 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.71□□□□□ -2.14
TPM1P09493 AC009310.1-201ENST00000414414 451 ntBASIC1.71□□□□□ -2.14
TPM1P09493 UBE2V1P4-201ENST00000425374 344 ntBASIC1.71□□□□□ -2.14
TPM1P09493 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.71□□□□□ -2.14
TPM1P09493 MTCO2P25-201ENST00000447065 681 ntBASIC1.71□□□□□ -2.14
TPM1P09493 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.71□□□□□ -2.14
TPM1P09493 BTF3P15-201ENST00000455606 336 ntBASIC1.71□□□□□ -2.14
TPM1P09493 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.71□□□□□ -2.14
TPM1P09493 RNA5SP57-201ENST00000459463 123 ntBASIC1.71□□□□□ -2.14
TPM1P09493 AC104629.1-201ENST00000494226 508 ntBASIC1.71□□□□□ -2.14
TPM1P09493 AP004607.1-201ENST00000524456 203 ntBASIC1.71□□□□□ -2.14
TPM1P09493 IMMP1LP2-201ENST00000552954 492 ntBASIC1.71□□□□□ -2.14
TPM1P09493 AC136619.2-201ENST00000563361 631 ntBASIC1.71□□□□□ -2.14
TPM1P09493 AC018638.7-201ENST00000605836 1114 ntBASIC1.71□□□□□ -2.14
TPM1P09493 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.71□□□□□ -2.14
TPM1P09493 AC090970.3-201ENST00000612566 866 ntBASIC1.71□□□□□ -2.14
TPM1P09493 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
TPM1P09493 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
TPM1P09493 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
TPM1P09493 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
TPM1P09493 AC006026.1-201ENST00000444025 1803 ntBASIC1.7□□□□□ -2.14
TPM1P09493 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.7□□□□□ -2.14
TPM1P09493 RNU1-42P-201ENST00000364033 160 ntBASIC1.7□□□□□ -2.14
TPM1P09493 RNU6-224P-201ENST00000384055 107 ntBASIC1.7□□□□□ -2.14
TPM1P09493 MIR518D-201ENST00000385014 87 ntBASIC1.7□□□□□ -2.14
TPM1P09493 SNORA40.2-201ENST00000390847 128 ntBASIC1.7□□□□□ -2.14
TPM1P09493 BX510359.4-201ENST00000423750 193 ntBASIC1.7□□□□□ -2.14
TPM1P09493 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.7□□□□□ -2.14
TPM1P09493 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
TPM1P09493 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.7□□□□□ -2.14
TPM1P09493 AC068587.2-201ENST00000478386 781 ntBASIC1.7□□□□□ -2.14
TPM1P09493 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.7□□□□□ -2.14
TPM1P09493 MTCYBP43-201ENST00000513621 740 ntBASIC1.7□□□□□ -2.14
TPM1P09493 RNU6-572P-201ENST00000516724 80 ntBASIC1.7□□□□□ -2.14
TPM1P09493 RNU6-250P-201ENST00000516958 103 ntBASIC1.7□□□□□ -2.14
TPM1P09493 AC009902.1-201ENST00000519351 183 ntBASIC1.7□□□□□ -2.14
TPM1P09493 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.7□□□□□ -2.14
TPM1P09493 EEF1A1P37-201ENST00000522748 715 ntBASIC1.7□□□□□ -2.14
TPM1P09493 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.7□□□□□ -2.14
TPM1P09493 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.7□□□□□ -2.14
TPM1P09493 BX248123.2-201ENST00000606318 124 ntBASIC1.7□□□□□ -2.14
TPM1P09493 U1.36-201ENST00000620684 176 ntBASIC1.7□□□□□ -2.14
TPM1P09493 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.69□□□□□ -2.14
TPM1P09493 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
TPM1P09493 RNU6-777P-201ENST00000364265 104 ntBASIC1.69□□□□□ -2.14
TPM1P09493 MIR320A-201ENST00000385302 82 ntBASIC1.69□□□□□ -2.14
TPM1P09493 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
TPM1P09493 RNU6-955P-201ENST00000410497 104 ntBASIC1.69□□□□□ -2.14
TPM1P09493 RNU2-48P-201ENST00000410694 191 ntBASIC1.69□□□□□ -2.14
TPM1P09493 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms