Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 ZNF680P1-201ENST00000436625 1469 ntBASIC0.8□□□□□ -2.28
TNFP01375 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
TNFP01375 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
TNFP01375 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
TNFP01375 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.8□□□□□ -2.28
TNFP01375 AC004941.2-201ENST00000427009 228 ntBASIC0.8□□□□□ -2.28
TNFP01375 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.8□□□□□ -2.28
TNFP01375 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.8□□□□□ -2.28
TNFP01375 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.8□□□□□ -2.28
TNFP01375 snoU13.9-201ENST00000458927 103 ntBASIC0.8□□□□□ -2.28
TNFP01375 NDUFA5P6-201ENST00000542110 379 ntBASIC0.8□□□□□ -2.28
TNFP01375 MIR5000-201ENST00000577717 103 ntBASIC0.8□□□□□ -2.28
TNFP01375 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC0.8□□□□□ -2.28
TNFP01375 HSPE1P19-201ENST00000603327 295 ntBASIC0.8□□□□□ -2.28
TNFP01375 MIR6515-201ENST00000619843 57 ntBASIC0.8□□□□□ -2.28
TNFP01375 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.79□□□□□ -2.28
TNFP01375 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
TNFP01375 SNORD114-2-201ENST00000363953 78 ntBASIC0.79□□□□□ -2.28
TNFP01375 Y_RNA.354-201ENST00000365448 111 ntBASIC0.79□□□□□ -2.28
TNFP01375 PIGPP2-201ENST00000411569 458 ntBASIC0.79□□□□□ -2.28
TNFP01375 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.79□□□□□ -2.28
TNFP01375 AL135790.2-201ENST00000437701 267 ntBASIC0.79□□□□□ -2.28
TNFP01375 AC017099.1-201ENST00000448261 1028 ntBASIC0.79□□□□□ -2.28
TNFP01375 FCF1P6-201ENST00000456841 595 ntBASIC0.79□□□□□ -2.28
TNFP01375 AC018437.1-201ENST00000492214 406 ntBASIC0.79□□□□□ -2.28
TNFP01375 RNA5SP384-201ENST00000516615 116 ntBASIC0.79□□□□□ -2.28
TNFP01375 AP003066.2-201ENST00000529375 555 ntBASIC0.79□□□□□ -2.28
TNFP01375 AP003034.1-201ENST00000534621 422 ntBASIC0.79□□□□□ -2.28
TNFP01375 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.79□□□□□ -2.28
TNFP01375 AP005136.1-201ENST00000579765 429 ntBASIC0.79□□□□□ -2.28
TNFP01375 AC005261.5-201ENST00000596280 355 ntBASIC0.79□□□□□ -2.28
TNFP01375 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.79□□□□□ -2.28
TNFP01375 GDI2P1-201ENST00000429312 1336 ntBASIC0.79□□□□□ -2.28
TNFP01375 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
TNFP01375 OR5T3-201ENST00000303059 1023 ntBASIC0.78□□□□□ -2.28
TNFP01375 RNY1-201ENST00000364228 113 ntBASIC0.78□□□□□ -2.28
TNFP01375 RNU6-1187P-201ENST00000364771 110 ntBASIC0.78□□□□□ -2.28
TNFP01375 RNU6-152P-201ENST00000384037 107 ntBASIC0.78□□□□□ -2.28
TNFP01375 MIR29C-201ENST00000385231 88 ntBASIC0.78□□□□□ -2.28
TNFP01375 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
TNFP01375 RNU11-3P-201ENST00000391111 133 ntBASIC0.78□□□□□ -2.28
TNFP01375 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.78□□□□□ -2.28
TNFP01375 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC0.78□□□□□ -2.28
TNFP01375 AC092634.2-201ENST00000428146 1010 ntBASIC0.78□□□□□ -2.28
TNFP01375 RPS15AP17-201ENST00000470598 390 ntBASIC0.78□□□□□ -2.28
TNFP01375 OR9N1P-202ENST00000494289 481 ntBASIC0.78□□□□□ -2.28
TNFP01375 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.78□□□□□ -2.28
TNFP01375 RPS27AP10-201ENST00000496103 208 ntBASIC0.78□□□□□ -2.28
TNFP01375 MTCYBP16-201ENST00000509187 1129 ntBASIC0.78□□□□□ -2.28
TNFP01375 RNU6-351P-201ENST00000516097 100 ntBASIC0.78□□□□□ -2.28
TNFP01375 SNORD19.2-201ENST00000516978 73 ntBASIC0.78□□□□□ -2.28
TNFP01375 SNORA48.11-201ENST00000517015 89 ntBASIC0.78□□□□□ -2.28
TNFP01375 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC0.78□□□□□ -2.28
TNFP01375 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC0.78□□□□□ -2.28
TNFP01375 AP003122.4-201ENST00000530980 758 ntBASIC0.78□□□□□ -2.28
TNFP01375 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC0.78□□□□□ -2.28
TNFP01375 AC090115.3-201ENST00000553218 849 ntBASIC0.78□□□□□ -2.28
TNFP01375 AC027104.1-201ENST00000563702 681 ntBASIC0.78□□□□□ -2.28
TNFP01375 AC233266.2-201ENST00000567067 528 ntBASIC0.78□□□□□ -2.28
TNFP01375 AC108706.1-201ENST00000611053 297 ntBASIC0.78□□□□□ -2.28
TNFP01375 AL121890.5-201ENST00000620848 304 ntBASIC0.78□□□□□ -2.28
TNFP01375 AC090517.3-201ENST00000625170 141 ntBASIC0.78□□□□□ -2.28
TNFP01375 AL590396.2-201ENST00000636511 1041 ntBASIC0.78□□□□□ -2.28
TNFP01375 MIR6866-201ENST00000638146 69 ntBASIC0.78□□□□□ -2.28
TNFP01375 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
TNFP01375 ENSAP3-201ENST00000312710 333 ntBASIC0.77□□□□□ -2.29
TNFP01375 SNORA70.7-201ENST00000384159 133 ntBASIC0.77□□□□□ -2.29
TNFP01375 RNU6-439P-201ENST00000384188 106 ntBASIC0.77□□□□□ -2.29
TNFP01375 RNU6-17P-201ENST00000384245 107 ntBASIC0.77□□□□□ -2.29
TNFP01375 RNU6-18P-201ENST00000384527 107 ntBASIC0.77□□□□□ -2.29
TNFP01375 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
TNFP01375 AL109755.1-201ENST00000401791 649 ntBASIC0.77□□□□□ -2.29
TNFP01375 RNA5SP501-201ENST00000410990 112 ntBASIC0.77□□□□□ -2.29
TNFP01375 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.77□□□□□ -2.29
TNFP01375 MTCO3P2-201ENST00000457365 171 ntBASIC0.77□□□□□ -2.29
TNFP01375 AP001324.2-201ENST00000461163 319 ntBASIC0.77□□□□□ -2.29
TNFP01375 AC018868.1-201ENST00000491307 315 ntBASIC0.77□□□□□ -2.29
TNFP01375 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC0.77□□□□□ -2.29
TNFP01375 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.77□□□□□ -2.29
TNFP01375 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.77□□□□□ -2.29
TNFP01375 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC0.77□□□□□ -2.29
TNFP01375 SNORA31.22-201ENST00000517204 135 ntBASIC0.77□□□□□ -2.29
TNFP01375 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC0.77□□□□□ -2.29
TNFP01375 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC0.77□□□□□ -2.29
TNFP01375 AC125611.1-201ENST00000549563 229 ntBASIC0.77□□□□□ -2.29
TNFP01375 AC021739.1-201ENST00000559631 174 ntBASIC0.77□□□□□ -2.29
TNFP01375 MIR3167-201ENST00000579623 85 ntBASIC0.77□□□□□ -2.29
TNFP01375 AP005229.2-201ENST00000609980 697 ntBASIC0.77□□□□□ -2.29
TNFP01375 MIR6835-201ENST00000621552 64 ntBASIC0.77□□□□□ -2.29
TNFP01375 Z75746.1-201ENST00000440243 2080 ntBASIC0.77□□□□□ -2.29
TNFP01375 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.76□□□□□ -2.29
TNFP01375 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.76□□□□□ -2.29
TNFP01375 RNU5E-1-201ENST00000362477 120 ntBASIC0.76□□□□□ -2.29
TNFP01375 MIR95-201ENST00000385072 81 ntBASIC0.76□□□□□ -2.29
TNFP01375 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.76□□□□□ -2.29
TNFP01375 AC078974.1-201ENST00000411597 223 ntBASIC0.76□□□□□ -2.29
TNFP01375 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.76□□□□□ -2.29
TNFP01375 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.76□□□□□ -2.29
TNFP01375 KATNBL1P6-201ENST00000453433 915 ntBASIC0.76□□□□□ -2.29
TNFP01375 AC244505.3-201ENST00000454598 187 ntBASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms