Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.06□□□□□ -1.92
LDLRP01130 RNA5SP310-201ENST00000459084 116 ntBASIC3.06□□□□□ -1.92
LDLRP01130 AC104472.2-201ENST00000469035 601 ntBASIC3.06□□□□□ -1.92
LDLRP01130 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.06□□□□□ -1.92
LDLRP01130 AC010486.1-201ENST00000511793 424 ntBASIC3.06□□□□□ -1.92
LDLRP01130 SNORA31.1-201ENST00000515993 133 ntBASIC3.06□□□□□ -1.92
LDLRP01130 SNORA31.5-201ENST00000516190 133 ntBASIC3.06□□□□□ -1.92
LDLRP01130 Y_RNA.675-201ENST00000516389 149 ntBASIC3.06□□□□□ -1.92
LDLRP01130 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.06□□□□□ -1.92
LDLRP01130 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.06□□□□□ -1.92
LDLRP01130 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.06□□□□□ -1.92
LDLRP01130 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.06□□□□□ -1.92
LDLRP01130 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.06□□□□□ -1.92
LDLRP01130 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.06□□□□□ -1.92
LDLRP01130 AC104984.5-201ENST00000586878 94 ntBASIC3.06□□□□□ -1.92
LDLRP01130 NRBF2P5-201ENST00000603087 788 ntBASIC3.06□□□□□ -1.92
LDLRP01130 AL132765.2-201ENST00000610812 351 ntBASIC3.06□□□□□ -1.92
LDLRP01130 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.06□□□□□ -1.92
LDLRP01130 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
LDLRP01130 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LDLRP01130 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LDLRP01130 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.05□□□□□ -1.92
LDLRP01130 API5P2-201ENST00000397055 1498 ntBASIC3.05□□□□□ -1.92
LDLRP01130 RNU6-845P-201ENST00000362578 103 ntBASIC3.05□□□□□ -1.92
LDLRP01130 RNU6-960P-201ENST00000364056 120 ntBASIC3.05□□□□□ -1.92
LDLRP01130 RNU6-1322P-201ENST00000364309 107 ntBASIC3.05□□□□□ -1.92
LDLRP01130 RNU1-140P-201ENST00000365040 165 ntBASIC3.05□□□□□ -1.92
LDLRP01130 Y_RNA.481-201ENST00000384373 102 ntBASIC3.05□□□□□ -1.92
LDLRP01130 AL357075.1-201ENST00000404107 726 ntBASIC3.05□□□□□ -1.92
LDLRP01130 RNU4-47P-201ENST00000410876 114 ntBASIC3.05□□□□□ -1.92
LDLRP01130 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.05□□□□□ -1.92
LDLRP01130 AL590383.1-201ENST00000428602 75 ntBASIC3.05□□□□□ -1.92
LDLRP01130 RPS20P5-201ENST00000434808 360 ntBASIC3.05□□□□□ -1.92
LDLRP01130 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.05□□□□□ -1.92
LDLRP01130 HMGB3P12-201ENST00000438745 556 ntBASIC3.05□□□□□ -1.92
LDLRP01130 CALM1P1-201ENST00000442082 433 ntBASIC3.05□□□□□ -1.92
LDLRP01130 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LDLRP01130 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.05□□□□□ -1.92
LDLRP01130 KC877373.1-201ENST00000479066 408 ntBASIC3.05□□□□□ -1.92
LDLRP01130 AC006445.1-201ENST00000491925 405 ntBASIC3.05□□□□□ -1.92
LDLRP01130 FCF1P8-201ENST00000510322 597 ntBASIC3.05□□□□□ -1.92
LDLRP01130 RN7SKP282-201ENST00000516824 299 ntBASIC3.05□□□□□ -1.92
LDLRP01130 RNU6-410P-201ENST00000517006 107 ntBASIC3.05□□□□□ -1.92
LDLRP01130 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.05□□□□□ -1.92
LDLRP01130 CASP1P1-201ENST00000526345 212 ntBASIC3.05□□□□□ -1.92
LDLRP01130 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.05□□□□□ -1.92
LDLRP01130 AC005476.1-201ENST00000554427 397 ntBASIC3.05□□□□□ -1.92
LDLRP01130 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.05□□□□□ -1.92
LDLRP01130 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.05□□□□□ -1.92
LDLRP01130 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.05□□□□□ -1.92
LDLRP01130 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.05□□□□□ -1.92
LDLRP01130 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.05□□□□□ -1.92
LDLRP01130 AC007998.5-201ENST00000622938 237 ntBASIC3.05□□□□□ -1.92
LDLRP01130 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.05□□□□□ -1.92
LDLRP01130 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
LDLRP01130 RNU1-70P-201ENST00000362618 164 ntBASIC3.04□□□□□ -1.92
LDLRP01130 Y_RNA.72-201ENST00000362894 103 ntBASIC3.04□□□□□ -1.92
LDLRP01130 RNU6-288P-201ENST00000363690 104 ntBASIC3.04□□□□□ -1.92
LDLRP01130 SNORA14A-201ENST00000364773 135 ntBASIC3.04□□□□□ -1.92
LDLRP01130 RNU6-946P-201ENST00000383878 107 ntBASIC3.04□□□□□ -1.92
LDLRP01130 RNU6-767P-201ENST00000384132 107 ntBASIC3.04□□□□□ -1.92
LDLRP01130 RNU6-1158P-201ENST00000391167 107 ntBASIC3.04□□□□□ -1.92
LDLRP01130 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LDLRP01130 AL356432.1-201ENST00000405809 419 ntBASIC3.04□□□□□ -1.92
LDLRP01130 AL138885.1-201ENST00000405921 675 ntBASIC3.04□□□□□ -1.92
LDLRP01130 RNU2-9P-201ENST00000410194 145 ntBASIC3.04□□□□□ -1.92
LDLRP01130 BMS1P22-201ENST00000414726 313 ntBASIC3.04□□□□□ -1.92
LDLRP01130 TMEM167AP1-201ENST00000423409 219 ntBASIC3.04□□□□□ -1.92
LDLRP01130 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.04□□□□□ -1.92
LDLRP01130 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.04□□□□□ -1.92
LDLRP01130 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.04□□□□□ -1.92
LDLRP01130 MED13P1-201ENST00000428342 171 ntBASIC3.04□□□□□ -1.92
LDLRP01130 AL606489.2-201ENST00000433886 234 ntBASIC3.04□□□□□ -1.92
LDLRP01130 MTATP6P16-201ENST00000434543 526 ntBASIC3.04□□□□□ -1.92
LDLRP01130 AC107083.1-201ENST00000439643 279 ntBASIC3.04□□□□□ -1.92
LDLRP01130 PIGFP3-201ENST00000441918 722 ntBASIC3.04□□□□□ -1.92
LDLRP01130 CBWD4P-201ENST00000445695 655 ntBASIC3.04□□□□□ -1.92
LDLRP01130 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.04□□□□□ -1.92
LDLRP01130 AC083798.1-201ENST00000472671 131 ntBASIC3.04□□□□□ -1.92
LDLRP01130 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.04□□□□□ -1.92
LDLRP01130 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.04□□□□□ -1.92
LDLRP01130 OR5B19P-201ENST00000531766 928 ntBASIC3.04□□□□□ -1.92
LDLRP01130 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.04□□□□□ -1.92
LDLRP01130 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.04□□□□□ -1.92
LDLRP01130 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.04□□□□□ -1.92
LDLRP01130 MTCO3P13-201ENST00000577757 781 ntBASIC3.04□□□□□ -1.92
LDLRP01130 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.04□□□□□ -1.92
LDLRP01130 AC018638.8-201ENST00000588755 281 ntBASIC3.04□□□□□ -1.92
LDLRP01130 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.04□□□□□ -1.92
LDLRP01130 AC093732.2-201ENST00000607950 274 ntBASIC3.04□□□□□ -1.92
LDLRP01130 PART1_1.1-201ENST00000611761 217 ntBASIC3.04□□□□□ -1.92
LDLRP01130 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.04□□□□□ -1.92
LDLRP01130 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.04□□□□□ -1.92
LDLRP01130 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.04□□□□□ -1.92
LDLRP01130 AC092435.3-201ENST00000565538 3654 ntBASIC3.04□□□□□ -1.92
LDLRP01130 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
LDLRP01130 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.03□□□□□ -1.92
LDLRP01130 RNA5SP432-201ENST00000362480 116 ntBASIC3.03□□□□□ -1.92
LDLRP01130 Y_RNA.58-201ENST00000362807 102 ntBASIC3.03□□□□□ -1.92
LDLRP01130 RNU6-1097P-201ENST00000363586 107 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms