Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 MIR3670-1-201ENST00000584160 65 ntBASIC2.81□□□□□ -1.96
CLPTM1O96005 MIR3670-3-201ENST00000584855 65 ntBASIC2.81□□□□□ -1.96
CLPTM1O96005 AC008521.1-201ENST00000587471 187 ntBASIC2.81□□□□□ -1.96
CLPTM1O96005 AC060780.3-201ENST00000589464 80 ntBASIC2.81□□□□□ -1.96
CLPTM1O96005 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.81□□□□□ -1.96
CLPTM1O96005 AC104763.2-201ENST00000604179 382 ntBASIC2.81□□□□□ -1.96
CLPTM1O96005 AL670379.4-201ENST00000605279 254 ntBASIC2.81□□□□□ -1.96
CLPTM1O96005 MIR3670-4-201ENST00000612260 65 ntBASIC2.81□□□□□ -1.96
CLPTM1O96005 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.81□□□□□ -1.96
CLPTM1O96005 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.81□□□□□ -1.96
CLPTM1O96005 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CLPTM1O96005 AC026241.1-201ENST00000517873 2142 ntBASIC2.8□□□□□ -1.96
CLPTM1O96005 CASC19-280ENST00000642102 1351 ntBASIC2.8□□□□□ -1.96
CLPTM1O96005 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
CLPTM1O96005 RNU4-20P-201ENST00000365601 151 ntBASIC2.8□□□□□ -1.96
CLPTM1O96005 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CLPTM1O96005 AL139039.1-201ENST00000401900 692 ntBASIC2.8□□□□□ -1.96
CLPTM1O96005 U3.42-201ENST00000408746 214 ntBASIC2.8□□□□□ -1.96
CLPTM1O96005 RNU2-25P-201ENST00000411041 191 ntBASIC2.8□□□□□ -1.96
CLPTM1O96005 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.8□□□□□ -1.96
CLPTM1O96005 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.8□□□□□ -1.96
CLPTM1O96005 AL109913.1-201ENST00000421173 514 ntBASIC2.8□□□□□ -1.96
CLPTM1O96005 AC007919.1-201ENST00000429380 217 ntBASIC2.8□□□□□ -1.96
CLPTM1O96005 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.8□□□□□ -1.96
CLPTM1O96005 HMGB1P27-201ENST00000431429 603 ntBASIC2.8□□□□□ -1.96
CLPTM1O96005 AL591212.2-201ENST00000433923 257 ntBASIC2.8□□□□□ -1.96
CLPTM1O96005 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.8□□□□□ -1.96
CLPTM1O96005 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.8□□□□□ -1.96
CLPTM1O96005 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.8□□□□□ -1.96
CLPTM1O96005 AP000705.1-201ENST00000454567 350 ntBASIC2.8□□□□□ -1.96
CLPTM1O96005 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.8□□□□□ -1.96
CLPTM1O96005 AIG1P1-201ENST00000503376 148 ntBASIC2.8□□□□□ -1.96
CLPTM1O96005 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.8□□□□□ -1.96
CLPTM1O96005 AC117522.3-201ENST00000507974 584 ntBASIC2.8□□□□□ -1.96
CLPTM1O96005 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.8□□□□□ -1.96
CLPTM1O96005 RNU6-927P-201ENST00000516199 100 ntBASIC2.8□□□□□ -1.96
CLPTM1O96005 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.8□□□□□ -1.96
CLPTM1O96005 RANP3-201ENST00000530970 276 ntBASIC2.8□□□□□ -1.96
CLPTM1O96005 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.8□□□□□ -1.96
CLPTM1O96005 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
CLPTM1O96005 AP005205.1-201ENST00000563503 508 ntBASIC2.8□□□□□ -1.96
CLPTM1O96005 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.8□□□□□ -1.96
CLPTM1O96005 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.8□□□□□ -1.96
CLPTM1O96005 AC010525.2-201ENST00000590920 195 ntBASIC2.8□□□□□ -1.96
CLPTM1O96005 AC010620.2-201ENST00000600135 313 ntBASIC2.8□□□□□ -1.96
CLPTM1O96005 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
CLPTM1O96005 AP001486.3-201ENST00000615334 372 ntBASIC2.8□□□□□ -1.96
CLPTM1O96005 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.8□□□□□ -1.96
CLPTM1O96005 AC099654.14-201ENST00000638599 341 ntBASIC2.8□□□□□ -1.96
CLPTM1O96005 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.8□□□□□ -1.96
CLPTM1O96005 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
CLPTM1O96005 UBE2L2-201ENST00000254302 429 ntBASIC2.79□□□□□ -1.96
CLPTM1O96005 VTRNA1-1-201ENST00000363120 99 ntBASIC2.79□□□□□ -1.96
CLPTM1O96005 RNU6-116P-201ENST00000384042 109 ntBASIC2.79□□□□□ -1.96
CLPTM1O96005 RNU6-550P-201ENST00000391057 101 ntBASIC2.79□□□□□ -1.96
CLPTM1O96005 RNU6-817P-201ENST00000391083 104 ntBASIC2.79□□□□□ -1.96
CLPTM1O96005 RNU6-876P-201ENST00000391295 104 ntBASIC2.79□□□□□ -1.96
CLPTM1O96005 MIR1290-201ENST00000408735 78 ntBASIC2.79□□□□□ -1.96
CLPTM1O96005 HMGN2P35-201ENST00000412164 270 ntBASIC2.79□□□□□ -1.96
CLPTM1O96005 SNRPEP10-201ENST00000420249 274 ntBASIC2.79□□□□□ -1.96
CLPTM1O96005 AL139413.1-201ENST00000421309 217 ntBASIC2.79□□□□□ -1.96
CLPTM1O96005 NDUFB4P7-201ENST00000423198 363 ntBASIC2.79□□□□□ -1.96
CLPTM1O96005 CBWD4P-201ENST00000445695 655 ntBASIC2.79□□□□□ -1.96
CLPTM1O96005 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.79□□□□□ -1.96
CLPTM1O96005 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.79□□□□□ -1.96
CLPTM1O96005 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.79□□□□□ -1.96
CLPTM1O96005 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.79□□□□□ -1.96
CLPTM1O96005 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.79□□□□□ -1.96
CLPTM1O96005 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.79□□□□□ -1.96
CLPTM1O96005 RNU6-358P-201ENST00000516564 75 ntBASIC2.79□□□□□ -1.96
CLPTM1O96005 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.79□□□□□ -1.96
CLPTM1O96005 ADI1P3-201ENST00000549509 470 ntBASIC2.79□□□□□ -1.96
CLPTM1O96005 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.79□□□□□ -1.96
CLPTM1O96005 MIR5680-201ENST00000577577 84 ntBASIC2.79□□□□□ -1.96
CLPTM1O96005 AC138761.3-201ENST00000579993 334 ntBASIC2.79□□□□□ -1.96
CLPTM1O96005 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.79□□□□□ -1.96
CLPTM1O96005 NRBF2P5-201ENST00000603087 788 ntBASIC2.79□□□□□ -1.96
CLPTM1O96005 AC022893.3-201ENST00000607665 437 ntBASIC2.79□□□□□ -1.96
CLPTM1O96005 DISC2.1-201ENST00000612827 205 ntBASIC2.79□□□□□ -1.96
CLPTM1O96005 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.79□□□□□ -1.96
CLPTM1O96005 AC103710.2-202ENST00000641454 2853 ntBASIC2.79□□□□□ -1.96
CLPTM1O96005 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
CLPTM1O96005 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CLPTM1O96005 AC008568.2-201ENST00000623862 2313 ntBASIC2.79□□□□□ -1.96
CLPTM1O96005 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CLPTM1O96005 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CLPTM1O96005 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
CLPTM1O96005 AL139276.1-201ENST00000311910 1001 ntBASIC2.78□□□□□ -1.96
CLPTM1O96005 Y_RNA.88-201ENST00000363029 99 ntBASIC2.78□□□□□ -1.96
CLPTM1O96005 RNU6-512P-201ENST00000364438 103 ntBASIC2.78□□□□□ -1.96
CLPTM1O96005 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.78□□□□□ -1.96
CLPTM1O96005 MIR325-201ENST00000385260 98 ntBASIC2.78□□□□□ -1.96
CLPTM1O96005 U3.19-201ENST00000390893 196 ntBASIC2.78□□□□□ -1.96
CLPTM1O96005 AL606923.1-201ENST00000406616 190 ntBASIC2.78□□□□□ -1.96
CLPTM1O96005 RNA5SP111-201ENST00000411386 101 ntBASIC2.78□□□□□ -1.96
CLPTM1O96005 RPS12P24-201ENST00000412619 387 ntBASIC2.78□□□□□ -1.96
CLPTM1O96005 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.78□□□□□ -1.96
CLPTM1O96005 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.78□□□□□ -1.96
CLPTM1O96005 AL356867.1-201ENST00000429623 299 ntBASIC2.78□□□□□ -1.96
CLPTM1O96005 NDUFB4P6-201ENST00000436819 366 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms