Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AP002748.2-201ENST00000528671 348 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 AP003181.2-201ENST00000528941 181 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 RANP3-201ENST00000530970 276 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 AP003122.4-201ENST00000530980 758 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 MIR3118-1-201ENST00000581787 76 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CTDNEP1O95476 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.05□□□□□ -2.08
CTDNEP1O95476 AC012065.4-201ENST00000602445 679 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 DPPA3P3-201ENST00000603842 430 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 AC135507.1-201ENST00000607214 561 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 AC004908.2-201ENST00000609090 574 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 AC013476.2-201ENST00000614456 459 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 SDR42E1P2-201ENST00000614861 481 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 AC068057.2-201ENST00000624047 895 ntBASIC2.05□□□□□ -2.08
CTDNEP1O95476 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
CTDNEP1O95476 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.05□□□□□ -2.08
CTDNEP1O95476 SNORD115.1-201ENST00000391109 76 ntBASIC2.04□□□□□ -2.08
CTDNEP1O95476 AL359634.1-202ENST00000404721 284 ntBASIC2.04□□□□□ -2.08
CTDNEP1O95476 SEPT2P1-201ENST00000419651 180 ntBASIC2.04□□□□□ -2.08
CTDNEP1O95476 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.04□□□□□ -2.08
CTDNEP1O95476 CYCSP46-201ENST00000423569 204 ntBASIC2.04□□□□□ -2.08
CTDNEP1O95476 AL353777.1-201ENST00000425552 326 ntBASIC2.04□□□□□ -2.08
CTDNEP1O95476 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.04□□□□□ -2.08
CTDNEP1O95476 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.04□□□□□ -2.08
CTDNEP1O95476 MTATP6P17-201ENST00000431030 672 ntBASIC2.04□□□□□ -2.08
CTDNEP1O95476 CETN4P-201ENST00000432407 469 ntBASIC2.04□□□□□ -2.08
CTDNEP1O95476 AL645568.3-201ENST00000433683 316 ntBASIC2.04□□□□□ -2.08
CTDNEP1O95476 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.04□□□□□ -2.08
CTDNEP1O95476 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.04□□□□□ -2.08
CTDNEP1O95476 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.04□□□□□ -2.08
CTDNEP1O95476 BNIP3P2-201ENST00000441221 577 ntBASIC2.04□□□□□ -2.08
CTDNEP1O95476 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.04□□□□□ -2.08
CTDNEP1O95476 DDX3P2-201ENST00000446138 111 ntBASIC2.04□□□□□ -2.08
CTDNEP1O95476 ELOCP30-201ENST00000447108 299 ntBASIC2.04□□□□□ -2.08
CTDNEP1O95476 AL590365.1-201ENST00000450788 243 ntBASIC2.04□□□□□ -2.08
CTDNEP1O95476 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.04□□□□□ -2.08
CTDNEP1O95476 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.04□□□□□ -2.08
CTDNEP1O95476 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.04□□□□□ -2.08
CTDNEP1O95476 AP000797.1-201ENST00000478870 387 ntBASIC2.04□□□□□ -2.08
CTDNEP1O95476 SUMO2P6-201ENST00000505273 288 ntBASIC2.04□□□□□ -2.08
CTDNEP1O95476 AC114797.1-201ENST00000514003 728 ntBASIC2.04□□□□□ -2.08
CTDNEP1O95476 RNU6-840P-201ENST00000517275 65 ntBASIC2.04□□□□□ -2.08
CTDNEP1O95476 AC022616.6-201ENST00000520479 119 ntBASIC2.04□□□□□ -2.08
CTDNEP1O95476 DEFB108A-201ENST00000530110 222 ntBASIC2.04□□□□□ -2.08
CTDNEP1O95476 AC007834.2-201ENST00000536310 343 ntBASIC2.04□□□□□ -2.08
CTDNEP1O95476 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.04□□□□□ -2.08
CTDNEP1O95476 OSBPL9P5-201ENST00000542581 171 ntBASIC2.04□□□□□ -2.08
CTDNEP1O95476 MRPS36P5-201ENST00000551909 298 ntBASIC2.04□□□□□ -2.08
CTDNEP1O95476 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.04□□□□□ -2.08
CTDNEP1O95476 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.04□□□□□ -2.08
CTDNEP1O95476 AC012414.6-201ENST00000568241 401 ntBASIC2.04□□□□□ -2.08
CTDNEP1O95476 MIR3146-201ENST00000580367 79 ntBASIC2.04□□□□□ -2.08
CTDNEP1O95476 APOOP1-201ENST00000604695 592 ntBASIC2.04□□□□□ -2.08
CTDNEP1O95476 AC092354.1-201ENST00000606057 376 ntBASIC2.04□□□□□ -2.08
CTDNEP1O95476 AL449363.1-201ENST00000617815 186 ntBASIC2.04□□□□□ -2.08
CTDNEP1O95476 AC092140.2-201ENST00000618027 521 ntBASIC2.04□□□□□ -2.08
CTDNEP1O95476 AC091953.2-201ENST00000623979 160 ntBASIC2.04□□□□□ -2.08
CTDNEP1O95476 AC099654.13-201ENST00000639774 207 ntBASIC2.04□□□□□ -2.08
CTDNEP1O95476 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.04□□□□□ -2.08
CTDNEP1O95476 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CTDNEP1O95476 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.03□□□□□ -2.08
CTDNEP1O95476 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CTDNEP1O95476 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.03□□□□□ -2.08
CTDNEP1O95476 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.03□□□□□ -2.08
CTDNEP1O95476 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CTDNEP1O95476 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
CTDNEP1O95476 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.03□□□□□ -2.08
CTDNEP1O95476 RNU6-223P-201ENST00000362830 107 ntBASIC2.03□□□□□ -2.08
CTDNEP1O95476 RNU4-1-201ENST00000363925 141 ntBASIC2.03□□□□□ -2.08
CTDNEP1O95476 RNY4P16-201ENST00000364768 94 ntBASIC2.03□□□□□ -2.08
CTDNEP1O95476 RNU5E-5P-201ENST00000365379 116 ntBASIC2.03□□□□□ -2.08
CTDNEP1O95476 RNU5A-2P-201ENST00000384337 116 ntBASIC2.03□□□□□ -2.08
CTDNEP1O95476 AC019129.1-201ENST00000403786 261 ntBASIC2.03□□□□□ -2.08
CTDNEP1O95476 Y_RNA.608-201ENST00000410647 95 ntBASIC2.03□□□□□ -2.08
CTDNEP1O95476 NPM1P11-201ENST00000417106 855 ntBASIC2.03□□□□□ -2.08
CTDNEP1O95476 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.03□□□□□ -2.08
CTDNEP1O95476 AC092047.1-201ENST00000424997 240 ntBASIC2.03□□□□□ -2.08
CTDNEP1O95476 AL356583.2-201ENST00000426536 280 ntBASIC2.03□□□□□ -2.08
CTDNEP1O95476 AC007560.1-201ENST00000426912 237 ntBASIC2.03□□□□□ -2.08
CTDNEP1O95476 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.03□□□□□ -2.08
CTDNEP1O95476 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.03□□□□□ -2.08
CTDNEP1O95476 AC010153.1-201ENST00000432862 727 ntBASIC2.03□□□□□ -2.08
CTDNEP1O95476 AC020550.1-201ENST00000447385 163 ntBASIC2.03□□□□□ -2.08
CTDNEP1O95476 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.03□□□□□ -2.08
CTDNEP1O95476 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.03□□□□□ -2.08
CTDNEP1O95476 MTND2P24-201ENST00000453434 806 ntBASIC2.03□□□□□ -2.08
CTDNEP1O95476 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.03□□□□□ -2.08
CTDNEP1O95476 PPP1R2P5-201ENST00000457256 603 ntBASIC2.03□□□□□ -2.08
CTDNEP1O95476 BET1P1-201ENST00000482276 359 ntBASIC2.03□□□□□ -2.08
CTDNEP1O95476 RPF2P2-201ENST00000504693 896 ntBASIC2.03□□□□□ -2.08
CTDNEP1O95476 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.03□□□□□ -2.08
CTDNEP1O95476 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.03□□□□□ -2.08
CTDNEP1O95476 AC022634.1-201ENST00000520765 532 ntBASIC2.03□□□□□ -2.08
CTDNEP1O95476 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.03□□□□□ -2.08
CTDNEP1O95476 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.03□□□□□ -2.08
CTDNEP1O95476 ANP32BP3-201ENST00000559213 706 ntBASIC2.03□□□□□ -2.08
CTDNEP1O95476 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.03□□□□□ -2.08
CTDNEP1O95476 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms