Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.61□□□□□ -2.31
SIX6O95475 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC0.6□□□□□ -2.31
SIX6O95475 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
SIX6O95475 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
SIX6O95475 RNU1-58P-201ENST00000362413 163 ntBASIC0.6□□□□□ -2.31
SIX6O95475 SNORA48.1-201ENST00000390879 135 ntBASIC0.6□□□□□ -2.31
SIX6O95475 RPL22P22-201ENST00000395439 379 ntBASIC0.6□□□□□ -2.31
SIX6O95475 USP9YP26-201ENST00000421008 661 ntBASIC0.6□□□□□ -2.31
SIX6O95475 USP9YP18-201ENST00000425912 695 ntBASIC0.6□□□□□ -2.31
SIX6O95475 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC0.6□□□□□ -2.31
SIX6O95475 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.6□□□□□ -2.31
SIX6O95475 USP9YP17-201ENST00000444617 696 ntBASIC0.6□□□□□ -2.31
SIX6O95475 MOB1AP2-201ENST00000446060 614 ntBASIC0.6□□□□□ -2.31
SIX6O95475 AL929288.2-201ENST00000446368 407 ntBASIC0.6□□□□□ -2.31
SIX6O95475 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC0.6□□□□□ -2.31
SIX6O95475 MEMO1P3-201ENST00000459811 302 ntBASIC0.6□□□□□ -2.31
SIX6O95475 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.6□□□□□ -2.31
SIX6O95475 AL160314.1-201ENST00000490836 438 ntBASIC0.6□□□□□ -2.31
SIX6O95475 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.6□□□□□ -2.31
SIX6O95475 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC0.6□□□□□ -2.31
SIX6O95475 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.6□□□□□ -2.31
SIX6O95475 COPS8P3-201ENST00000526024 482 ntBASIC0.6□□□□□ -2.31
SIX6O95475 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.6□□□□□ -2.31
SIX6O95475 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.6□□□□□ -2.31
SIX6O95475 LARP7P2-201ENST00000575306 125 ntBASIC0.6□□□□□ -2.31
SIX6O95475 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.6□□□□□ -2.31
SIX6O95475 AL022345.1-201ENST00000607292 135 ntBASIC0.6□□□□□ -2.31
SIX6O95475 AC073569.3-201ENST00000619055 682 ntBASIC0.6□□□□□ -2.31
SIX6O95475 AL138713.1-201ENST00000624026 2130 ntBASIC0.6□□□□□ -2.31
SIX6O95475 AC241585.2-209ENST00000638217 143 ntBASIC0.6□□□□□ -2.31
SIX6O95475 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.6□□□□□ -2.31
SIX6O95475 ZNF849P-201ENST00000594711 1566 ntBASIC0.59□□□□□ -2.31
SIX6O95475 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.59□□□□□ -2.31
SIX6O95475 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
SIX6O95475 RNU5E-8P-201ENST00000363502 116 ntBASIC0.59□□□□□ -2.31
SIX6O95475 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
SIX6O95475 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.59□□□□□ -2.31
SIX6O95475 RNU6-1032P-201ENST00000384100 107 ntBASIC0.59□□□□□ -2.31
SIX6O95475 MIR100-201ENST00000385259 80 ntBASIC0.59□□□□□ -2.31
SIX6O95475 RNA5SP213-201ENST00000391031 106 ntBASIC0.59□□□□□ -2.31
SIX6O95475 SNORA11.2-201ENST00000408318 127 ntBASIC0.59□□□□□ -2.31
SIX6O95475 AC013410.2-201ENST00000422627 201 ntBASIC0.59□□□□□ -2.31
SIX6O95475 AL606490.4-201ENST00000423117 127 ntBASIC0.59□□□□□ -2.31
SIX6O95475 CST2P1-201ENST00000425770 87 ntBASIC0.59□□□□□ -2.31
SIX6O95475 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.59□□□□□ -2.31
SIX6O95475 AP001025.1-201ENST00000486139 332 ntBASIC0.59□□□□□ -2.31
SIX6O95475 ARL2BPP4-201ENST00000506854 471 ntBASIC0.59□□□□□ -2.31
SIX6O95475 SNORA31.17-201ENST00000516953 127 ntBASIC0.59□□□□□ -2.31
SIX6O95475 RNA5SP290-201ENST00000517133 127 ntBASIC0.59□□□□□ -2.31
SIX6O95475 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.31
SIX6O95475 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.59□□□□□ -2.31
SIX6O95475 MTCO2P15-201ENST00000532655 656 ntBASIC0.59□□□□□ -2.31
SIX6O95475 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC0.59□□□□□ -2.31
SIX6O95475 RAB11AP2-201ENST00000545905 639 ntBASIC0.59□□□□□ -2.31
SIX6O95475 LINC00557-201ENST00000563184 1279 ntBASIC0.59□□□□□ -2.31
SIX6O95475 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.59□□□□□ -2.31
SIX6O95475 MIR8063-201ENST00000621930 81 ntBASIC0.59□□□□□ -2.31
SIX6O95475 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC0.59□□□□□ -2.31
SIX6O95475 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.59□□□□□ -2.31
SIX6O95475 ATM-230ENST00000640388 578 ntTSL 5 BASIC0.59□□□□□ -2.31
SIX6O95475 MTCO1P9-201ENST00000505577 1534 ntBASIC0.59□□□□□ -2.32
SIX6O95475 AC092125.1-201ENST00000562568 1995 ntBASIC0.58□□□□□ -2.32
SIX6O95475 RNU6-1164P-201ENST00000364428 107 ntBASIC0.58□□□□□ -2.32
SIX6O95475 CCNG1P1-201ENST00000406783 885 ntBASIC0.58□□□□□ -2.32
SIX6O95475 MIR1267-201ENST00000408723 78 ntBASIC0.58□□□□□ -2.32
SIX6O95475 UBE2V1P11-201ENST00000411559 285 ntBASIC0.58□□□□□ -2.32
SIX6O95475 AC006461.1-201ENST00000412637 326 ntBASIC0.58□□□□□ -2.32
SIX6O95475 AC011005.2-201ENST00000487324 359 ntBASIC0.58□□□□□ -2.32
SIX6O95475 RPS23P4-201ENST00000487908 423 ntBASIC0.58□□□□□ -2.32
SIX6O95475 AC117454.1-201ENST00000491120 168 ntBASIC0.58□□□□□ -2.32
SIX6O95475 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.58□□□□□ -2.32
SIX6O95475 AP006587.4-201ENST00000526053 529 ntBASIC0.58□□□□□ -2.32
SIX6O95475 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.58□□□□□ -2.32
SIX6O95475 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC0.58□□□□□ -2.32
SIX6O95475 AC136932.1-201ENST00000574771 208 ntBASIC0.58□□□□□ -2.32
SIX6O95475 AC073544.2-201ENST00000601155 540 ntBASIC0.58□□□□□ -2.32
SIX6O95475 AC004853.1-201ENST00000604902 698 ntBASIC0.58□□□□□ -2.32
SIX6O95475 MIR6857-201ENST00000613267 93 ntBASIC0.58□□□□□ -2.32
SIX6O95475 MIR302D-201ENST00000362275 68 ntBASIC0.57□□□□□ -2.32
SIX6O95475 RNU6-252P-201ENST00000363232 107 ntBASIC0.57□□□□□ -2.32
SIX6O95475 RNU1-22P-201ENST00000363334 158 ntBASIC0.57□□□□□ -2.32
SIX6O95475 SNORD1A-201ENST00000364968 72 ntBASIC0.57□□□□□ -2.32
SIX6O95475 RNU6-619P-201ENST00000365146 108 ntBASIC0.57□□□□□ -2.32
SIX6O95475 AC069282.1-201ENST00000411911 526 ntBASIC0.57□□□□□ -2.32
SIX6O95475 NCOR1P3-201ENST00000420479 303 ntBASIC0.57□□□□□ -2.32
SIX6O95475 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.57□□□□□ -2.32
SIX6O95475 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.57□□□□□ -2.32
SIX6O95475 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
SIX6O95475 UBE2V2P3-201ENST00000433562 437 ntBASIC0.57□□□□□ -2.32
SIX6O95475 AL050341.1-201ENST00000447743 313 ntBASIC0.57□□□□□ -2.32
SIX6O95475 USP9YP34-201ENST00000453983 808 ntBASIC0.57□□□□□ -2.32
SIX6O95475 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC0.57□□□□□ -2.32
SIX6O95475 PRELID3BP1-201ENST00000457142 540 ntBASIC0.57□□□□□ -2.32
SIX6O95475 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.57□□□□□ -2.32
SIX6O95475 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
SIX6O95475 RNVU1-2-201ENST00000516326 135 ntBASIC0.57□□□□□ -2.32
SIX6O95475 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.57□□□□□ -2.32
SIX6O95475 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.57□□□□□ -2.32
SIX6O95475 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC0.57□□□□□ -2.32
SIX6O95475 AC004817.2-201ENST00000561794 651 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms